ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart41c06 |
|---|---|
| Clone Library Name | barley_pub |
>TYDC5_PAPSO (P54771) Tyrosine/DOPA decarboxylase 5 [Includes: DOPA| decarboxylase (EC 4.1.1.28) (DDC); Tyrosine decarboxylase (EC 4.1.1.25)] Length = 523 Score = 99.8 bits (247), Expect = 4e-21 Identities = 50/118 (42%), Positives = 74/118 (62%), Gaps = 12/118 (10%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGG------------QKTANDLNRA 366 MA F+ ++ D+RFE+V TFA+VCFR++P F G ++ N++N Sbjct: 402 MAKHFDGLIAMDKRFEIVVPNTFAMVCFRLKPAAIFNGKLGENGVDYNCIEEKTNEINSK 461 Query: 365 LLEQVNAVTSGPYMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGKME 192 LLE VNA + YM+ A VGG++M+R AVG+TLTE+ HV+ WKV+Q+ ILG ++ Sbjct: 462 LLESVNA-SGSIYMTHAVVGGVYMIRFAVGATLTEERHVSMAWKVIQEHTDAILGTVD 518
>TYDC1_PAPSO (P54768) Tyrosine/DOPA decarboxylase 1 [Includes: DOPA| decarboxylase (EC 4.1.1.28) (DDC); Tyrosine decarboxylase (EC 4.1.1.25)] Length = 518 Score = 96.3 bits (238), Expect = 4e-20 Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 9/114 (7%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGG--------QKTANDLNRALLEQ 354 MA F+ ++ D RFE+V RTFA+VCFR++P F + N++N LLE Sbjct: 402 MAKHFQGLIGMDNRFEIVVPRTFAMVCFRLKPAAIFRKKIVEDDHIEAQTNEVNAKLLES 461 Query: 353 VNAVTSGP-YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGKM 195 VNA SG YM+ A VGG++M+R AVG+TLTE+ HV WKVVQ+ ILG + Sbjct: 462 VNA--SGKIYMTHAVVGGVYMIRFAVGATLTEERHVTGAWKVVQEHTDAILGAL 513
>TYDC2_PAPSO (P54769) Tyrosine/DOPA decarboxylase 2 [Includes: DOPA| decarboxylase (EC 4.1.1.28) (DDC); Tyrosine decarboxylase (EC 4.1.1.25)] Length = 531 Score = 94.4 bits (233), Expect = 2e-19 Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 21/125 (16%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPV---------------------DKFGGQ 393 MA FE ++ D RFE+ RTFA+VCFR+ P D+ Sbjct: 400 MAKTFEGLICMDGRFEITVPRTFAMVCFRLLPPKTIKVYDNGVHQNGNGVVPLRDENENL 459 Query: 392 KTANDLNRALLEQVNAVTSGPYMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQAS 213 AN LN+ LE VNA T YM+ A VGG++M+R AVGSTLTE+ HV + WK++Q+ A Sbjct: 460 VLANKLNQVYLETVNA-TGSVYMTHAVVGGVYMIRFAVGSTLTEERHVIYAWKILQEHAD 518 Query: 212 VILGK 198 +ILGK Sbjct: 519 LILGK 523
>TYDC3_PAPSO (P54770) Tyrosine/DOPA decarboxylase 3 [Includes: DOPA| decarboxylase (EC 4.1.1.28) (DDC); Tyrosine decarboxylase (EC 4.1.1.25)] Length = 533 Score = 94.4 bits (233), Expect = 2e-19 Identities = 56/129 (43%), Positives = 72/129 (55%), Gaps = 23/129 (17%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRP--VDKFGGQK------------------ 390 MA FE +V AD RFE+ RTFA+VCFR+ P K G+ Sbjct: 400 MAKTFEGLVGADRRFEITVPRTFAMVCFRLLPPTTVKVCGENGVHQNGNGVIAVLRNENE 459 Query: 389 ---TANDLNRALLEQVNAVTSGPYMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQ 219 AN LN+ L QV A T YM+ A VGG++M+R AVGSTLTE+ HV H W+V+Q+ Sbjct: 460 ELVLANKLNQVYLRQVKA-TGSVYMTHAVVGGVYMIRFAVGSTLTEERHVIHAWEVLQEH 518 Query: 218 ASVILGKME 192 A +IL K + Sbjct: 519 ADLILSKFD 527
>TYDC1_ARATH (Q8RY79) Tyrosine decarboxylase 1 (EC 4.1.1.25)| Length = 490 Score = 93.6 bits (231), Expect = 3e-19 Identities = 50/105 (47%), Positives = 69/105 (65%), Gaps = 1/105 (0%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 +A EFE +V D FE+VT R FALVCFR+ PV +K N+ NR LL+ VN+ SG Sbjct: 390 LAKEFEQLVSQDPNFEIVTPRIFALVCFRLVPVKD--EEKKCNNRNRELLDAVNS--SGK 445 Query: 329 -YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGK 198 +MS + G +LRCA+G+ LTE+ HV WK++Q++AS +L K Sbjct: 446 LFMSHTALSGKIVLRCAIGAPLTEEKHVKEAWKIIQEEASYLLHK 490
>TYDC2_PETCR (Q06086) Tyrosine decarboxylase 2 (EC 4.1.1.25)| Length = 514 Score = 90.5 bits (223), Expect = 2e-18 Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 2/104 (1%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFG--GQKTANDLNRALLEQVNAVTS 336 MA FE +V D+RFEVV R F++VCFRI+P G + N++NR LLE VN + Sbjct: 398 MAKYFEGLVNMDKRFEVVAPRLFSMVCFRIKPSAMIGKNDEDEVNEINRKLLESVND-SG 456 Query: 335 GPYMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVIL 204 Y+S +GG++++R A+G TLT+ +HV+ WKV+QD A +L Sbjct: 457 RIYVSHTVLGGIYVIRFAIGGTLTDINHVSAAWKVLQDHAGALL 500
>TYDC3_PETCR (Q06087) Tyrosine decarboxylase 3 (EC 4.1.1.25)| Length = 516 Score = 90.1 bits (222), Expect = 3e-18 Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 2/104 (1%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFG--GQKTANDLNRALLEQVNAVTS 336 MA FE +V D+RFEVV R F++VCFRI+P G + N++NR LLE VN + Sbjct: 400 MAKYFEGLVGLDKRFEVVAPRLFSMVCFRIKPSAMIGKNDENEVNEINRKLLESVND-SG 458 Query: 335 GPYMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVIL 204 Y+S +GG++++R A+G TLT+ +HV+ WKV+QD A +L Sbjct: 459 RIYVSHTVLGGIYVIRFAIGGTLTDINHVSAAWKVLQDHADALL 502
>TYDC4_PETCR (Q06088) Tyrosine decarboxylase 4 (EC 4.1.1.25)| Length = 508 Score = 89.7 bits (221), Expect = 4e-18 Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 2/104 (1%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFG--GQKTANDLNRALLEQVNAVTS 336 MA FE +V D+RFEVV R F++VCFRI+P G + N++NR LLE VN + Sbjct: 399 MAKYFEGLVGLDKRFEVVAPRLFSMVCFRIKPSAMIGKNDEDEVNEINRKLLESVND-SG 457 Query: 335 GPYMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVIL 204 Y+S +GG++++R A+G TLT+ +HV+ WKV+QD A +L Sbjct: 458 RIYVSHTVLGGIYVIRFAIGGTLTDINHVSAAWKVLQDHADALL 501
>TYDC2_ARATH (Q9M0G4) Probable tyrosine decarboxylase 2 (EC 4.1.1.25)| Length = 545 Score = 87.0 bits (214), Expect = 3e-17 Identities = 47/99 (47%), Positives = 62/99 (62%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 +A FED V D FEVVT R F+LVCFR+ PVD G + N+ NR LL VN+ T Sbjct: 442 LAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVD--GDEDQCNERNRELLAAVNS-TGKI 498 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQAS 213 ++S + G F+LR AVG+ LTE+ HV W+++Q AS Sbjct: 499 FISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHAS 537
>DDC_CATRO (P17770) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (Tryptophan decarboxylase) Length = 500 Score = 84.3 bits (207), Expect = 2e-16 Identities = 43/95 (45%), Positives = 62/95 (65%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 M FE+ VR+D RFE+V R F+LVCFR++P ++N+ LL+ +N+ T Sbjct: 400 MGKMFEEWVRSDSRFEIVVPRNFSLVCFRLKPDVS---SLHVEEVNKKLLDMLNS-TGRV 455 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQ 225 YM+ VGG++MLR AVGS+LTE+HHV W ++Q Sbjct: 456 YMTHTIVGGIYMLRLAVGSSLTEEHHVRRVWDLIQ 490
>DDC_RAT (P14173) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 480 Score = 62.4 bits (150), Expect = 7e-10 Identities = 37/99 (37%), Positives = 53/99 (53%) Frame = -2 Query: 500 EFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPYMS 321 EFE +VR D RFE+ TE LVCFR+ K +N LN LL+++N+ ++ Sbjct: 387 EFESLVRQDPRFEICTEVILGLVCFRL---------KGSNQLNETLLQRINSAKK-IHLV 436 Query: 320 SANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVIL 204 + F+LR AV S E HV W+ ++D AS +L Sbjct: 437 PCRLRDKFVLRFAVCSRTVESAHVQLAWEHIRDLASSVL 475
>DDC_MOUSE (O88533) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 480 Score = 61.6 bits (148), Expect = 1e-09 Identities = 36/99 (36%), Positives = 53/99 (53%) Frame = -2 Query: 500 EFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPYMS 321 EFE +VR D RFE+ TE LVCFR+ K +N+LN LL+++N+ ++ Sbjct: 387 EFESLVRQDPRFEICTEVILGLVCFRL---------KGSNELNETLLQRINSAKK-IHLV 436 Query: 320 SANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVIL 204 + F+LR AV + E HV W+ + D AS +L Sbjct: 437 PCRLRDKFVLRFAVCARTVESAHVQLAWEHISDLASSVL 475
>DDC_CAVPO (P22781) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 480 Score = 60.1 bits (144), Expect = 3e-09 Identities = 35/102 (34%), Positives = 54/102 (52%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 +A EFE +VR D RFE+ E T LVCFR+ K +N LN LL+++N+ Sbjct: 384 LAHEFESLVRQDPRFEICMEVTLGLVCFRL---------KGSNQLNETLLKRINSARK-I 433 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVIL 204 ++ ++ F+LR + S E HV W+ ++ AS +L Sbjct: 434 HLVPCHLRDKFVLRFRICSRQVESDHVQQAWQHIRQLASSVL 475
>DDC_BOVIN (P27718) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 487 Score = 59.3 bits (142), Expect = 6e-09 Identities = 35/98 (35%), Positives = 52/98 (53%) Frame = -2 Query: 497 FEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPYMSS 318 FE +VR D RFE+ E LVCFR+ K +N LN ALLE +N+ ++ Sbjct: 388 FEALVRQDTRFEICAEVILGLVCFRL---------KGSNKLNEALLESINSAKK-IHLVP 437 Query: 317 ANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVIL 204 ++ F+LR A+ S E HV W+ +Q+ A+ +L Sbjct: 438 CSLRDRFVLRFAICSRTVELAHVQLAWEHIQEMAATVL 475
>DDC_PIG (P80041) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 486 Score = 58.9 bits (141), Expect = 8e-09 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 4/108 (3%) Frame = -2 Query: 500 EFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPYMS 321 EFE V D RFEV E T LVCFR+ K ++ LN ALLE++N+ ++ Sbjct: 387 EFEAFVLQDPRFEVCAEVTLGLVCFRL---------KGSDGLNEALLERINSARK-IHLV 436 Query: 320 SANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVIL----GKMEI 189 + G F+LR A+ S E HV W+ ++ A+ +L GK EI Sbjct: 437 PCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLAAEEGKAEI 484
>DDC_HUMAN (P20711) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 480 Score = 58.5 bits (140), Expect = 1e-08 Identities = 33/99 (33%), Positives = 54/99 (54%) Frame = -2 Query: 500 EFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPYMS 321 EFE +VR D RFE+ E LVCFR+ K +N +N ALL+++N+ ++ Sbjct: 387 EFESLVRQDPRFEICVEVILGLVCFRL---------KGSNKVNEALLQRINSAKK-IHLV 436 Query: 320 SANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVIL 204 ++ F+LR A+ S E HV W+ +++ A+ +L Sbjct: 437 PCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVL 475
>DDC_MANSE (P48861) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 508 Score = 53.9 bits (128), Expect = 2e-07 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 2/111 (1%) Frame = -2 Query: 497 FEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPYMSS 318 FE ++ +DERFE+ E T LVCFR+ K +N++N LL ++N ++ Sbjct: 386 FERLLTSDERFELFEEVTMGLVCFRL---------KGSNEINEELLRRING-RGKIHLVP 435 Query: 317 ANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGK--MEIIHTLCS 171 + V ++ LR A+ S TE+ + W+ ++D+ + L +I +CS Sbjct: 436 SKVDDVYFLRLAICSRFTEESDMHVSWEEIKDRLMMFLKSKGAVLIKIICS 486
>TYDC1_PETCR (Q06085) Tyrosine decarboxylase 1 (EC 4.1.1.25) (ELI5) (Fragment)| Length = 432 Score = 53.5 bits (127), Expect = 3e-07 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFG--GQKTANDLNRALLEQVN 348 MA FE +V D RFEVV R F++VCFRI+P G + N++NR LLE VN Sbjct: 375 MAKYFEGLVGMDNRFEVVAPRLFSMVCFRIKPSAMIGKNDEDEVNEINRKLLESVN 430
>DDC_DROSI (O96567) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 510 Score = 52.0 bits (123), Expect = 9e-07 Identities = 31/97 (31%), Positives = 49/97 (50%) Frame = -2 Query: 506 AVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPY 327 A +F D+ AD RFE+ E LVCFR+ K +N+ N ALL+++N + Sbjct: 417 AKQFGDLCVADSRFELAAEINMGLVCFRL---------KGSNERNEALLKRING-RGHIH 466 Query: 326 MSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQA 216 + A + ++ LR A+ S T+ + + WK V A Sbjct: 467 LVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAA 503
>DDC_DROME (P05031) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) Length = 510 Score = 52.0 bits (123), Expect = 9e-07 Identities = 31/97 (31%), Positives = 49/97 (50%) Frame = -2 Query: 506 AVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPY 327 A +F D+ AD RFE+ E LVCFR+ K +N+ N ALL+++N + Sbjct: 417 AKQFGDLCVADSRFELAAEINMGLVCFRL---------KGSNERNEALLKRING-RGHIH 466 Query: 326 MSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQA 216 + A + ++ LR A+ S T+ + + WK V A Sbjct: 467 LVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAA 503
>DCHS_RAT (P16453) Histidine decarboxylase (EC 4.1.1.22) (HDC)| Length = 656 Score = 48.1 bits (113), Expect = 1e-05 Identities = 29/104 (27%), Positives = 53/104 (50%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 MA FE +VR+D FE+ ER LV FR+ K N L ++L+++ A T Sbjct: 387 MAKYFESLVRSDPVFEIPAERHLGLVVFRL---------KGPNCLTESVLKEI-AKTGQV 436 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGK 198 ++ A + ++R V S T + + W ++++ A+++L + Sbjct: 437 FLIPATIQDKLIIRFTVTSQFTTKDDILRDWNLIREAANLVLSQ 480
>DCHS_DROME (Q05733) Histidine decarboxylase (EC 4.1.1.22) (HDC)| Length = 847 Score = 48.1 bits (113), Expect = 1e-05 Identities = 31/107 (28%), Positives = 54/107 (50%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 +A +FE +V AD RFE+ +R LV FRIR N++ LL+++N Sbjct: 383 LAQKFEALVLADHRFELPAKRHLGLVVFRIR---------GDNEITEKLLKRLNH-RGNL 432 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGKMEI 189 + +++ G +++R + ST T + W ++ AS +L +M I Sbjct: 433 HCIPSSLKGQYVIRFTITSTHTTLDDIVKDWMEIRQVASTVLEEMNI 479
>DCHS_BOVIN (Q5EA83) Histidine decarboxylase (EC 4.1.1.22) (HDC)| Length = 658 Score = 46.6 bits (109), Expect = 4e-05 Identities = 30/104 (28%), Positives = 51/104 (49%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 MA FE +VR D FE+ +R LV FR+ K N L ++L+++ A Sbjct: 384 MAKYFESLVRNDPFFEIPAKRHLGLVVFRL---------KGPNCLTESVLKEI-AKAGRL 433 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGK 198 ++ A + ++R V S T + + W ++QD A++IL + Sbjct: 434 FLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIQDAATLILSQ 477
>DDC_DROLE (O96571) Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) (AADC)| (DOPA decarboxylase) (DDC) (Fragment) Length = 403 Score = 46.6 bits (109), Expect = 4e-05 Identities = 29/97 (29%), Positives = 47/97 (48%) Frame = -2 Query: 506 AVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPY 327 A +F ++ D RFE+ E LVCFR+ K +N+ N ALL+++N + Sbjct: 309 AQQFAELCVQDSRFELAAEVNMGLVCFRL---------KGSNERNEALLKRING-RGKIH 358 Query: 326 MSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQA 216 + A + ++ LR AV S T + + W+ V A Sbjct: 359 LVPAKIRDVYFLRMAVCSRFTRPEDMEYSWQEVSAAA 395
>DCHS_MOUSE (P23738) Histidine decarboxylase (EC 4.1.1.22) (HDC)| Length = 662 Score = 46.6 bits (109), Expect = 4e-05 Identities = 28/104 (26%), Positives = 52/104 (50%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 MA FE +VR+D FE+ +R LV FR+ K N L ++L+++ A Sbjct: 391 MAKYFESLVRSDPSFEIPAKRHLGLVVFRL---------KGPNCLTESVLKEI-AKAGQL 440 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGK 198 ++ A + ++R V S T + + W ++Q+ A+++L + Sbjct: 441 FLIPATIQDKLIIRFTVTSQFTTKEDILRDWHLIQEAANLVLSQ 484
>DCHS_HUMAN (P19113) Histidine decarboxylase (EC 4.1.1.22) (HDC)| Length = 662 Score = 44.7 bits (104), Expect = 1e-04 Identities = 29/104 (27%), Positives = 50/104 (48%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 MA FE +VR D FE+ +R LV FR+ K N L +L+++ A Sbjct: 384 MAKYFESLVRNDPSFEIPAKRHLGLVVFRL---------KGPNCLTENVLKEI-AKAGRL 433 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGK 198 ++ A + ++R V S T + + W +++D A++IL + Sbjct: 434 FLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLILSQ 477
>L2AM_DROLE (O96569) Alpha-methyldopa hypersensitive protein (EC 4.1.1.-)| (Fragment) Length = 439 Score = 44.3 bits (103), Expect = 2e-04 Identities = 32/106 (30%), Positives = 46/106 (43%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 +A +FE V AD RFE+V R LVCFR + G + L + L+E+ Sbjct: 313 LAKKFEVFVLADARFELVAPRALGLVCFRAK-----GENEITAQLLQRLMERKKI----- 362 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGKME 192 YM A G LR AV + + W + Q + +L + E Sbjct: 363 YMVKAEHRGQLFLRFAVCGMDPKPSDIEFAWTEIGTQLTALLAEQE 408
>L2AM_DROME (P18486) Alpha-methyldopa hypersensitive protein (EC 4.1.1.-)| Length = 510 Score = 43.1 bits (100), Expect = 4e-04 Identities = 28/108 (25%), Positives = 48/108 (44%) Frame = -2 Query: 509 MAVEFEDMVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGP 330 +A +FE +V D RFE+V R LVCFR + G + L + L+++ Sbjct: 384 LAKQFEQLVLKDSRFELVAPRALGLVCFRPK-----GDNEITTQLLQRLMDRKKI----- 433 Query: 329 YMSSANVGGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVILGKMEII 186 YM A G LR V T+ + W+ ++ Q + + + ++ Sbjct: 434 YMVKAEHAGRQFLRFVVCGMDTKASDIDFAWQEIESQLTDLQAEQSLV 481
>DDC_CAEEL (P34751) Probable aromatic-L-amino-acid decarboxylase (EC 4.1.1.28)| (AADC) (DOPA decarboxylase) (DDC) Length = 830 Score = 35.4 bits (80), Expect = 0.090 Identities = 22/94 (23%), Positives = 45/94 (47%) Frame = -2 Query: 488 MVRADERFEVVTERTFALVCFRIRPVDKFGGQKTANDLNRALLEQVNAVTSGPYMSSANV 309 +++ D RFEV + L+CFR + D F N+ALL + N T ++S + Sbjct: 648 ILQKDLRFEVCNKVVMGLICFRAKSNDMF---------NKALLYRCNE-TGNVSLASCVL 697 Query: 308 GGMFMLRCAVGSTLTEQHHVAHGWKVVQDQASVI 207 F++R + S + + +K++ ++ ++ Sbjct: 698 QNKFVIRMCINSPKCSEEDLDSAYKLICNEYDIL 731
>LPXK_THIDA (Q3SIR4) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 329 Score = 29.6 bits (65), Expect = 5.0 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Frame = -1 Query: 432 VLQDSAGGQVWRPKDGQRPQPSPPRAGERRHLR------PLHELCKRRW 304 V+Q GG WR G + + RAG+ R LR PL L +R W Sbjct: 195 VVQVVRGGGAWRTYLGLKTWRADYRAGDARRLRAPEERKPLRALAQREW 243
>ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219| Length = 722 Score = 29.6 bits (65), Expect = 5.0 Identities = 14/26 (53%), Positives = 14/26 (53%) Frame = -1 Query: 270 PHGATPRCPWMEGRAGSGLRDPWEDG 193 P G TP P EG GSGL P E G Sbjct: 691 PSGETPPSPSQEGEEGSGLSRPGEAG 716
>HRG_BOVIN (P33433) Histidine-rich glycoprotein (Histidine-proline-rich| glycoprotein) (HPRG) (Fragments) Length = 396 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/40 (37%), Positives = 17/40 (42%) Frame = -1 Query: 372 PSPPRAGERRHLRPLHELCKRRWHVHAKVCGGEHPHGATP 253 P PP + H RP H+ H H G HPHG P Sbjct: 243 PHPPFGTKGNH-RPPHDHSSDEHHPHGHHPHGHHPHGHHP 281
>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)| Length = 892 Score = 28.9 bits (63), Expect = 8.5 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Frame = -1 Query: 396 PKDGQRPQPSPPRAGERRHLRPLHELCKRRWHVHAKVCGGEHPHGAT----PRCPWMEGR 229 P+ + P P+PPR + H P H + V PH + P CP +G Sbjct: 408 PQPLRDPHPAPPRTSQEPHQNP-HGVIPS--ESKPFVASKPKPHTPSLPRPPGCPAQQG- 463 Query: 228 AGSGLRDPWEDGDHPHPLL 172 GS DP + PHP L Sbjct: 464 -GSAPIDPPPVHESPHPPL 481
>DPAL_ECOLI (P66899) Putative diaminopropionate ammonia-lyase (EC 4.3.1.15)| (Diaminopropionatase) (Alpha,beta-diaminopropionate ammonia-lyase) Length = 398 Score = 28.9 bits (63), Expect = 8.5 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -2 Query: 269 LTEQHHVAHGWKVVQDQA 216 LT QH HGW+VVQD A Sbjct: 174 LTMQHAQQHGWEVVQDTA 191
>DPAL_ECOL6 (P66900) Putative diaminopropionate ammonia-lyase (EC 4.3.1.15)| (Diaminopropionatase) (Alpha,beta-diaminopropionate ammonia-lyase) Length = 398 Score = 28.9 bits (63), Expect = 8.5 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -2 Query: 269 LTEQHHVAHGWKVVQDQA 216 LT QH HGW+VVQD A Sbjct: 174 LTMQHAQQHGWEVVQDTA 191
>DPAL_ECO57 (P66901) Putative diaminopropionate ammonia-lyase (EC 4.3.1.15)| (Diaminopropionatase) (Alpha,beta-diaminopropionate ammonia-lyase) Length = 398 Score = 28.9 bits (63), Expect = 8.5 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -2 Query: 269 LTEQHHVAHGWKVVQDQA 216 LT QH HGW+VVQD A Sbjct: 174 LTMQHAQQHGWEVVQDTA 191 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,185,516 Number of Sequences: 219361 Number of extensions: 1700175 Number of successful extensions: 4879 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4633 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4855 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
