Clone Name | rbart41c05 |
---|---|
Clone Library Name | barley_pub |
>ARAA_ECOLI (P08202) L-arabinose isomerase (EC 5.3.1.4)| Length = 500 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +3 Query: 33 QQHSAVTMYVKQAATKQKSSGKKVCRYG 116 Q H + +++QA +KQ + KVCR+G Sbjct: 155 QAHERIGSWMRQAVSKQDTRHLKVCRFG 182
>ARAA_ECOL6 (Q8FL89) L-arabinose isomerase (EC 5.3.1.4)| Length = 500 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +3 Query: 33 QQHSAVTMYVKQAATKQKSSGKKVCRYG 116 Q H + +++QA +KQ + KVCR+G Sbjct: 155 QAHERIGSWMRQAVSKQDTRHLKVCRFG 182
>ARAA_ECO57 (P58538) L-arabinose isomerase (EC 5.3.1.4)| Length = 500 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +3 Query: 33 QQHSAVTMYVKQAATKQKSSGKKVCRYG 116 Q H + +++QA +KQ + KVCR+G Sbjct: 155 QAHERIGSWMRQAVSKQDTRHLKVCRFG 182
>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 1008 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = -3 Query: 215 SPSGSVNLDGGSCRRHEPLSLAPKLSPVSL 126 +P S +D GSCR+ EPL+ + K PVSL Sbjct: 663 TPQASEKVDPGSCRKAEPLA-SGKGEPVSL 691
>HIF1A_ONCMY (Q98SW2) Hypoxia-inducible factor 1 alpha (HIF-1 alpha) (HIF1| alpha) Length = 766 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 10/44 (22%) Frame = +2 Query: 38 ALGSDHVCKT----------SSNQTKILGKKGMSLWLRTQGKLV 139 AL SDH+ KT S+ Q ++L K+G +W+ TQ ++ Sbjct: 283 ALDSDHLMKTHHNLFAKGQVSTGQYRMLAKRGGFVWVETQATVI 326
>GLPB_ECOL6 (Q8FFN4) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC| 1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B) (Anaerobic G3Pdhase B) Length = 419 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = -2 Query: 201 RESGRWVVPSSRALVSCSQIITSFPCVRSHSDIPFFPRIFV 79 R+ G W+ V+C + + R+H+DIP PR V Sbjct: 268 RQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFVV 308 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,145,143 Number of Sequences: 219361 Number of extensions: 655196 Number of successful extensions: 1798 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1798 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)