ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart41c01 |
|---|---|
| Clone Library Name | barley_pub |
>UGPA_HORVU (Q43772) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 473 Score = 145 bits (366), Expect = 6e-35 Identities = 76/87 (87%), Positives = 76/87 (87%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLK VLKGNVTI Sbjct: 387 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKVSGDVSFGSGVVLKGNVTI 446 Query: 336 AAKAGVKLEIPDGAVLENKDINGPEDI 256 AAKAGVKLEIPDGAVLENKDINGPEDI Sbjct: 447 AAKAGVKLEIPDGAVLENKDINGPEDI 473
>UGPA_SOLTU (P19595) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 476 Score = 130 bits (328), Expect = 2e-30 Identities = 65/87 (74%), Positives = 70/87 (80%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 NPAR PSNPSIELGPEFKKVANFL RFKSIPSI++LDSLK LKG VT+ Sbjct: 390 NPARSNPSNPSIELGPEFKKVANFLGRFKSIPSIIDLDSLKVTGDVWFGSGVTLKGKVTV 449 Query: 336 AAKAGVKLEIPDGAVLENKDINGPEDI 256 AAK+GVKLEIPDGAV+ NKDINGPEDI Sbjct: 450 AAKSGVKLEIPDGAVIANKDINGPEDI 476
>UGPA_MUSAC (Q9SDX3) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 467 Score = 127 bits (319), Expect = 2e-29 Identities = 68/87 (78%), Positives = 71/87 (81%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 N AR PSNPSIELGPEFKKVANFL+RFKSIPSIVELDSLK VLKGNV+I Sbjct: 381 NKARTNPSNPSIELGPEFKKVANFLSRFKSIPSIVELDSLKVSGDVWFGEGVVLKGNVSI 440 Query: 336 AAKAGVKLEIPDGAVLENKDINGPEDI 256 AAK+GVKLEI DGAVLENK INGPEDI Sbjct: 441 AAKSGVKLEISDGAVLENKVINGPEDI 467
>UGPA2_ARATH (Q9M9P3) Probable UTP--glucose-1-phosphate uridylyltransferase 2| (EC 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 469 Score = 124 bits (311), Expect = 2e-28 Identities = 64/87 (73%), Positives = 70/87 (80%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 N AR PSNPSIELGPEFKKVA FL+RFKSIPSIVELDSLK VLKG VT+ Sbjct: 383 NKARTNPSNPSIELGPEFKKVATFLSRFKSIPSIVELDSLKVSGDVWFGSSIVLKGKVTV 442 Query: 336 AAKAGVKLEIPDGAVLENKDINGPEDI 256 AAK+GVKLEIPD AV+ENK+INGPED+ Sbjct: 443 AAKSGVKLEIPDRAVVENKNINGPEDL 469
>UGPA1_ARATH (P57751) UTP--glucose-1-phosphate uridylyltransferase 1 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) Length = 470 Score = 121 bits (304), Expect = 1e-27 Identities = 62/87 (71%), Positives = 68/87 (78%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 N AR P+NP+IELGPEFKKVA+FL+RFKSIPSIVELDSLK VLKG VT+ Sbjct: 384 NKARTNPTNPAIELGPEFKKVASFLSRFKSIPSIVELDSLKVSGDVWFGSGVVLKGKVTV 443 Query: 336 AAKAGVKLEIPDGAVLENKDINGPEDI 256 A AG KLEIPD AVLENKDINGPED+ Sbjct: 444 KANAGTKLEIPDNAVLENKDINGPEDL 470
>UGPA_ASTME (Q9LKG7) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 471 Score = 119 bits (297), Expect = 7e-27 Identities = 59/87 (67%), Positives = 68/87 (78%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 N AR P NPSIELGPEFKKV+NFL RFKSIPSIVELDSLK +LKG V+I Sbjct: 385 NKARTNPENPSIELGPEFKKVSNFLGRFKSIPSIVELDSLKVVGDVWFGTGVILKGKVSI 444 Query: 336 AAKAGVKLEIPDGAVLENKDINGPEDI 256 AK+GVK+EIPDGAV+ NK+INGP+D+ Sbjct: 445 VAKSGVKVEIPDGAVIANKEINGPKDL 471
>UGPA_PYRPY (O64459) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 471 Score = 115 bits (287), Expect = 9e-26 Identities = 58/87 (66%), Positives = 67/87 (77%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 N AR P NP+IELGPEFKKV ++L+RFKSIPSI+EL+SLK VLKG VTI Sbjct: 385 NSARKNPENPTIELGPEFKKVGSYLSRFKSIPSILELESLKVSGDVWFGAGVVLKGKVTI 444 Query: 336 AAKAGVKLEIPDGAVLENKDINGPEDI 256 AK+GVKLEIPD AV+ NKDINGPED+ Sbjct: 445 TAKSGVKLEIPDNAVIANKDINGPEDL 471
>UGPA2_MOUSE (Q91ZJ5) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/77 (44%), Positives = 47/77 (61%) Frame = -3 Query: 498 PSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGV 319 P+ P ++LG F KV ++L RF+SIP ++ELD L LKG V I A G Sbjct: 424 PTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGD 483 Query: 318 KLEIPDGAVLENKDING 268 +++IP GAVLENK ++G Sbjct: 484 RIDIPPGAVLENKIVSG 500
>UGPA2_HUMAN (Q16851) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/77 (44%), Positives = 47/77 (61%) Frame = -3 Query: 498 PSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGV 319 P+ P ++LG F KV ++L RF+SIP ++ELD L LKG V I A G Sbjct: 424 PTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGD 483 Query: 318 KLEIPDGAVLENKDING 268 +++IP GAVLENK ++G Sbjct: 484 RIDIPPGAVLENKIVSG 500
>UGPA2_BOVIN (Q07130) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/77 (44%), Positives = 47/77 (61%) Frame = -3 Query: 498 PSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGV 319 P+ P ++LG F KV ++L RF+SIP ++ELD L LKG V I A G Sbjct: 424 PTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGD 483 Query: 318 KLEIPDGAVLENKDING 268 +++IP GAVLENK ++G Sbjct: 484 RIDIPPGAVLENKIVSG 500
>UGPA1_HUMAN (Q07131) UTP--glucose-1-phosphate uridylyltransferase 1 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) Length = 507 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/77 (44%), Positives = 47/77 (61%) Frame = -3 Query: 498 PSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGV 319 P+ P ++LG F KV ++L RF+SIP ++ELD L LKG V I A G Sbjct: 424 PTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGD 483 Query: 318 KLEIPDGAVLENKDING 268 +++IP GAVLENK ++G Sbjct: 484 RIDIPPGAVLENKIVSG 500
>UGPA1_CRIGR (O35156) UTP--glucose-1-phosphate uridylyltransferase 1 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) Length = 507 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/77 (44%), Positives = 47/77 (61%) Frame = -3 Query: 498 PSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGV 319 P+ P ++LG F KV ++L RF+SIP ++ELD L LKG V I A G Sbjct: 424 PTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGD 483 Query: 318 KLEIPDGAVLENKDING 268 +++IP GAVLENK ++G Sbjct: 484 RIDIPPGAVLENKIVSG 500
>UGPA_DICDI (P08800) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 511 Score = 67.0 bits (162), Expect = 3e-11 Identities = 35/83 (42%), Positives = 47/83 (56%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 N R P ++LG EF V+++ RFKSIP ++ELD L LKG V I Sbjct: 422 NSKREGQDVPLVKLGEEFSTVSDYEKRFKSIPDLLELDHLTVSGDVYFGSRITLKGTVII 481 Query: 336 AAKAGVKLEIPDGAVLENKDING 268 A G +++IPDG VLENK ++G Sbjct: 482 VANHGERVDIPDGVVLENKVLSG 504
>UGPA2_PIG (P79303) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 65.9 bits (159), Expect = 7e-11 Identities = 33/77 (42%), Positives = 46/77 (59%) Frame = -3 Query: 498 PSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGV 319 P+ P ++LG F KV ++L RF+SIP ++ELD L LKG V I G Sbjct: 424 PTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIXNHGD 483 Query: 318 KLEIPDGAVLENKDING 268 +++IP GAVLENK ++G Sbjct: 484 RIDIPPGAVLENKIVSG 500
>UGPA1_YEAST (P32861) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 499 Score = 65.5 bits (158), Expect = 9e-11 Identities = 36/83 (43%), Positives = 47/83 (56%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 +P+R P NP I+LG FKKV+ F AR IP IVELD L L+G V I Sbjct: 411 DPSRFGP-NPLIKLGSHFKKVSGFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVII 469 Query: 336 AAKAGVKLEIPDGAVLENKDING 268 G K++IP+G++LEN + G Sbjct: 470 VCSDGHKIDIPNGSILENVVVTG 492
>UGPA1_SCHPO (P78811) Probable UTP--glucose-1-phosphate uridylyltransferase (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 506 Score = 65.1 bits (157), Expect = 1e-10 Identities = 36/83 (43%), Positives = 46/83 (55%) Frame = -3 Query: 516 NPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTI 337 NP R + P ++LG FKKVA+F A SIP I+ELD L LKG V I Sbjct: 417 NPRRFGGTAPLVKLGAHFKKVADFSAHIPSIPKILELDHLTITGDVNIGRNVTLKGTVII 476 Query: 336 AAKAGVKLEIPDGAVLENKDING 268 A +++IP+G+VLEN I G Sbjct: 477 VASDANRIDIPNGSVLENCVITG 499
>UGPA2_SCHPO (O59819) Probable UTP--glucose-1-phosphate uridylyltransferase (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 499 Score = 46.2 bits (108), Expect = 5e-05 Identities = 26/74 (35%), Positives = 35/74 (47%) Frame = -3 Query: 489 PSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGVKLE 310 P + + EFK +A R +PS+ +L SL +LKGN+ I A L Sbjct: 419 PVVRMSNEFKDIAELFCRIPYMPSMKDLVSLSISGNVYFGRNVILKGNIVIVASENTILC 478 Query: 309 IPDGAVLENKDING 268 IP AVLEN + G Sbjct: 479 IPSNAVLENCVVTG 492
>UGPA2_YEAST (P38709) Probable UTP--glucose-1-phosphate uridylyltransferase (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 493 Score = 46.2 bits (108), Expect = 5e-05 Identities = 26/72 (36%), Positives = 34/72 (47%) Frame = -3 Query: 489 PSIELGPEFKKVANFLARFKSIPSIVELDSLKXXXXXXXXXXXVLKGNVTIAAKAGVKLE 310 PSI+LG EF F IP+I+EL+ L LKG V I + Sbjct: 410 PSIDLGDEFATYETFKIGVPDIPNILELEHLTVMGNVFFGRNITLKGTVIIICDENDVIT 469 Query: 309 IPDGAVLENKDI 274 +PDG++LEN I Sbjct: 470 VPDGSILENVTI 481
>SRC8_CHICK (Q01406) Src substrate protein p85 (p80) (Cortactin)| Length = 563 Score = 30.8 bits (68), Expect = 2.3 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Frame = +1 Query: 211 WGCEKVGGQAGERHSNILWAVDVLVLKHRSVWDLQLD----SSLGGDGHVALEYDSRAKR 378 WG + V G + H NI + + +H+++ + +L+ +S G G +E D K Sbjct: 48 WGAKTVKGSGHQEHINIHQLRENVFQEHQTIKEKELETGPKASHGYGGKFGVEQDRMDKS 107 Query: 379 DITRDLQAVKLDDAGDRLETGKEVGNLFELRT 474 + + Q+ KL ++++ K G F ++T Sbjct: 108 AVGHEYQS-KLSKHCSQVDSVKGFGGKFGVQT 138
>REF2P_DROSI (Q24629) Protein ref(2)P (Refractory to sigma P)| Length = 599 Score = 30.4 bits (67), Expect = 3.0 Identities = 18/72 (25%), Positives = 32/72 (44%) Frame = +2 Query: 89 WTARRGLQLLCNRAPAGQHPSRMHTKNYRTVSPAKEDRKVSGDARRWAGRRVNVTQISSG 268 W GL C R G P + ++ PA++ R+ ARR AG ++ + Sbjct: 180 WFTGPGLGRRCGRRSRGHCPFQEASQPAPAAEPARDSRRERRHARRHAGVLSQFVEMMTN 239 Query: 269 PLMSLFSSTAPS 304 ++ ++TAP+ Sbjct: 240 LPLNTTTATAPA 251
>RL2_THEMA (P38510) 50S ribosomal protein L2| Length = 276 Score = 30.4 bits (67), Expect = 3.0 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Frame = +2 Query: 83 CQWTARRGLQLLCNRAPAGQHPSRMHTKNYRTVSPA-KEDRK--VSGDARR--WAGRRVN 247 CQ A+ G L R P+G+ ++H K Y TV ED K V G A R W GRR + Sbjct: 163 CQIMAKEGNYALL-RMPSGEL-RKVHIKCYATVGVVGNEDHKNEVHGKAGRVRWLGRRPH 220 Query: 248 VTQISSGPL 274 V ++ P+ Sbjct: 221 VRGVAMNPV 229
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 30.0 bits (66), Expect = 4.0 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = -2 Query: 355 QGQRDHRRQGWSQVGDPRRSGA*EQGHQRPRGYLSDVHPPARPPSR 218 QG +D G + G PRR+G+ E+G R G + PP R SR Sbjct: 903 QGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERI-PPRRAGSR 947
>Y564_TREPA (O83575) Hypothetical protein TP0564| Length = 678 Score = 29.6 bits (65), Expect = 5.2 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +2 Query: 68 QEERKCQWTARRGLQL-LCNRAPAGQH-PSRMHTK-NYRTVSPAKEDRKVSGDARRWAGR 238 QE C + RGL L L + P +H +R H + + + A++ ++S D+R + G Sbjct: 484 QEITACYRISERGLTLSLHSPLPIPRHIRARTHARLSTAEIQKAQDHLQISMDSRSYFGG 543 Query: 239 RVNVTQISS 265 R+NV ++ S Sbjct: 544 RINVLEVRS 552 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,934,442 Number of Sequences: 219361 Number of extensions: 1893803 Number of successful extensions: 5451 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 5100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5446 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
