ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463223.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
2gb|AC115359.5| Mus musculus BAC clone RP23-190K20 from chromosom... 46 0.11
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.11
4gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genom... 46 0.11
5dbj|AK051237.1| Mus musculus 12 days embryo spinal ganglion cDNA... 46 0.11
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
7emb|AL928915.24| Mouse DNA sequence from clone RP23-276J8 on chr... 46 0.11
8dbj|AK062353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
9gb|AY436779.1| Pyrus communis phosphatidyl glycerol specific pho... 44 0.42
10gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.42
11gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.42
12gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 44 0.42
13gb|BT016307.1| Zea mays clone Contig140 mRNA sequence 42 1.7
14gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
15gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
16gb|AY239474.1| Microtus irene C-myc (c-myc) gene, exon 2 and par... 42 1.7
17gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.7
18gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.7
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
20emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in ... 42 1.7
21dbj|AK109246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
22emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.7
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
24ref|XM_475559.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
25gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
26gb|AY738725.1| Trypanosoma cruzi Sof1-like protein mRNA, complet... 40 6.5
27gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete... 40 6.5
28ref|XM_364094.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 6.5
29gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
30ref|XM_656647.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.5
31gb|AY504633.1| Emericella nidulans delta9-stearic acid desaturas... 40 6.5
32ref|XM_816538.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.5
33gb|AY344437.1| Unidentified bacterium clone L5-12 16S ribosomal ... 40 6.5
34gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.5
35emb|Z48952.1|SC9916 S.cerevisiae chromosome XIII cosmid 9916 40 6.5
36emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.5
37emb|BX284763.1|NCB19A17 Neurospora crassa DNA linkage group II B... 40 6.5
38emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 40 6.5
39tpg|BK003235.1| TPA: TPA_inf: Drosophila melanogaster HDC19904 (... 40 6.5
40emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 40 6.5
41dbj|AB224379.1| Aspergillus oryzae cDNA, contig sequence: AoEST1224 40 6.5
42gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 6.5
43dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 6.5
44gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.5
45gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 40 6.5
46dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
47dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
48ref|XM_392372.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 6.5
49dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
50dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
51dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
52dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
53dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.5
54dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
55dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
56dbj|AK120039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
57dbj|AK106398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
58dbj|AK073473.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
59dbj|AK072653.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
60emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right termin... 40 6.5
61dbj|AK064058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
62gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 ... 40 6.5
63gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.5
64gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 6.5
65gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
66gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
67emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.5
68emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chrom... 40 6.5
69gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
70dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, comple... 40 6.5 
>ref|XM_463223.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 539

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 100 ctagctgggtgcgaagcggtcgagcagcagg 130
           ||||||||| |||||||||||||| ||||||
Sbjct: 318 ctagctgggggcgaagcggtcgaggagcagg 288
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>gb|AC115359.5| Mus musculus BAC clone RP23-190K20 from chromosome 2, complete sequence
          Length = 184634

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 18    gcataatgtctctgaacagtaag 40
             |||||||||||||||||||||||
Sbjct: 94668 gcataatgtctctgaacagtaag 94646
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 100      ctagctgggtgcgaagcggtcgagcagcagg 130
                ||||||||| |||||||||||||| ||||||
Sbjct: 23523076 ctagctgggggcgaagcggtcgaggagcagg 23523046



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 190    cttcgtcgccgcggctgccgcc 211
              ||||||||||||||||||||||
Sbjct: 175868 cttcgtcgccgcggctgccgcc 175889



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 344      gccgccgccaccgtcgtcgt 363
                ||||||||||||||||||||
Sbjct: 24788798 gccgccgccaccgtcgtcgt 24788817
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>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete
             sequence
          Length = 144383

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 100   ctagctgggtgcgaagcggtcgagcagcagg 130
             ||||||||| |||||||||||||| ||||||
Sbjct: 59181 ctagctgggggcgaagcggtcgaggagcagg 59211
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>dbj|AK051237.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130020I03 product:hypothetical
           Arginine-rich region containing protein, full insert
           sequence
          Length = 1878

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 18  gcataatgtctctgaacagtaag 40
           |||||||||||||||||||||||
Sbjct: 761 gcataatgtctctgaacagtaag 783
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 100      ctagctgggtgcgaagcggtcgagcagcagg 130
                ||||||||| |||||||||||||| ||||||
Sbjct: 23516104 ctagctgggggcgaagcggtcgaggagcagg 23516074



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 190    cttcgtcgccgcggctgccgcc 211
              ||||||||||||||||||||||
Sbjct: 175868 cttcgtcgccgcggctgccgcc 175889



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 344      gccgccgccaccgtcgtcgt 363
                ||||||||||||||||||||
Sbjct: 24878582 gccgccgccaccgtcgtcgt 24878601
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>emb|AL928915.24| Mouse DNA sequence from clone RP23-276J8 on chromosome 2, complete
              sequence
          Length = 145879

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 18     gcataatgtctctgaacagtaag 40
              |||||||||||||||||||||||
Sbjct: 138362 gcataatgtctctgaacagtaag 138340
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>dbj|AK062353.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-G07, full
           insert sequence
          Length = 533

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 100 ctagctgggtgcgaagcggtcgagcagcagg 130
           ||||||||| |||||||||||||| ||||||
Sbjct: 318 ctagctgggggcgaagcggtcgaggagcagg 288
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>gb|AY436779.1| Pyrus communis phosphatidyl glycerol specific phospholipase C-like
           mRNA, partial sequence
          Length = 343

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 111 cgaagcggtcgagcagcaggta 132
           ||||||||||||||||||||||
Sbjct: 143 cgaagcggtcgagcagcaggta 164
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>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 190   cttcgtcgccgcggctgccgcc 211
             ||||||||||||||||||||||
Sbjct: 12935 cttcgtcgccgcggctgccgcc 12956
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 190    cttcgtcgccgcggctgccgcc 211
              ||||||||||||||||||||||
Sbjct: 109868 cttcgtcgccgcggctgccgcc 109889
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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 190   cttcgtcgccgcggctgccgcc 211
             ||||||||||||||||||||||
Sbjct: 86786 cttcgtcgccgcggctgccgcc 86765
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>gb|BT016307.1| Zea mays clone Contig140 mRNA sequence
          Length = 620

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 194 gtcgccgcggctgccgccttg 214
           |||||||||||||||||||||
Sbjct: 51  gtcgccgcggctgccgccttg 31
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>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0070D14, complete sequence
          Length = 174780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 330   cggcgacgtcggatgccgccgccaccgtc 358
             |||||||| ||| ||||||||||||||||
Sbjct: 24893 cggcgacgccggctgccgccgccaccgtc 24865
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>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13,
              complete sequence
          Length = 176150

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 330    cggcgacgtcggatgccgccgccaccgtc 358
              |||||||| ||| ||||||||||||||||
Sbjct: 141719 cggcgacgccggctgccgccgccaccgtc 141691
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>gb|AY239474.1| Microtus irene C-myc (c-myc) gene, exon 2 and partial cds
          Length = 668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 343 tgccgccgccaccgtcgtcgt 363
           |||||||||||||||||||||
Sbjct: 233 tgccgccgccaccgtcgtcgt 213
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 295     cagggcggcggagagctcgcc 315
               |||||||||||||||||||||
Sbjct: 1390536 cagggcggcggagagctcgcc 1390556
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 322    ccaggcgccggcgacgtcgga 342
              |||||||||||||||||||||
Sbjct: 610996 ccaggcgccggcgacgtcgga 610976
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 330      cggcgacgtcggatgccgccgccaccgtc 358
                |||||||| ||| ||||||||||||||||
Sbjct: 15031932 cggcgacgccggctgccgccgccaccgtc 15031904
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>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6,
             complete sequence
          Length = 143341

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tagttacatatacagtggagg 81
             |||||||||||||||||||||
Sbjct: 57355 tagttacatatacagtggagg 57375
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>dbj|AK109246.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G12, full
           insert sequence
          Length = 576

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 330 cggcgacgtcggatgccgccgccaccgtc 358
           |||||||| ||| ||||||||||||||||
Sbjct: 169 cggcgacgccggctgccgccgccaccgtc 141
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 339    cggatgccgccgccaccgtcg 359
              |||||||||||||||||||||
Sbjct: 846733 cggatgccgccgccaccgtcg 846753
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 330      cggcgacgtcggatgccgccgccaccgtc 358
                |||||||| ||| ||||||||||||||||
Sbjct: 15113627 cggcgacgccggctgccgccgccaccgtc 15113599
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>ref|XM_475559.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 gccgccgccaccgtcgtcgt 363
           ||||||||||||||||||||
Sbjct: 171 gccgccgccaccgtcgtcgt 152
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>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
             map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   gccgccgccaccgtcgtcgt 363
             ||||||||||||||||||||
Sbjct: 22494 gccgccgccaccgtcgtcgt 22513
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>gb|AY738725.1| Trypanosoma cruzi Sof1-like protein mRNA, complete cds
          Length = 1615

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   gtagttacatatacagtgga 79
            ||||||||||||||||||||
Sbjct: 1022 gtagttacatatacagtgga 1041
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>gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete sequence
          Length = 173097

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    gccgccgccaccgtcgtcgt 363
              ||||||||||||||||||||
Sbjct: 127922 gccgccgccaccgtcgtcgt 127941
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>ref|XM_364094.1| Magnaporthe grisea 70-15 predicted protein (MG08939.4) partial mRNA
          Length = 3876

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  cccgccgccgccggccccctccag 174
            |||| |||||||||||||||||||
Sbjct: 1074 cccggcgccgccggccccctccag 1097
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11,
              complete sequence
          Length = 124104

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    gccgccgccaccgtcgtcgt 363
              ||||||||||||||||||||
Sbjct: 108726 gccgccgccaccgtcgtcgt 108745
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>ref|XM_656647.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4135.2), mRNA
          Length = 1350

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 435 acgaaatggatgatctggat 454
           ||||||||||||||||||||
Sbjct: 838 acgaaatggatgatctggat 857
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>gb|AY504633.1| Emericella nidulans delta9-stearic acid desaturase (sdeB) gene,
            complete sequence
          Length = 2080

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  acgaaatggatgatctggat 454
            ||||||||||||||||||||
Sbjct: 1359 acgaaatggatgatctggat 1378
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>ref|XM_816538.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508461.390) partial mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   gtagttacatatacagtgga 79
            ||||||||||||||||||||
Sbjct: 1022 gtagttacatatacagtgga 1041
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>gb|AY344437.1| Unidentified bacterium clone L5-12 16S ribosomal RNA gene, partial
           sequence
          Length = 650

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 gaagcggtcgagcagcaggt 131
           ||||||||||||||||||||
Sbjct: 78  gaagcggtcgagcagcaggt 97
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     gcgaagcggtcgagcagcag 129
               ||||||||||||||||||||
Sbjct: 3390104 gcgaagcggtcgagcagcag 3390123
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>emb|Z48952.1|SC9916 S.cerevisiae chromosome XIII cosmid 9916
          Length = 22131

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 343   tgccgccgccaccgtcgtcgttga 366
             |||||||||||||||| |||||||
Sbjct: 11490 tgccgccgccaccgtcatcgttga 11467
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 263     atcgccggcacggcctgccg 282
               ||||||||||||||||||||
Sbjct: 1735409 atcgccggcacggcctgccg 1735428
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>emb|BX284763.1|NCB19A17 Neurospora crassa DNA linkage group II BAC contig B19A17
          Length = 155568

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    gccgccgccaccgtcgtcgt 363
              ||||||||||||||||||||
Sbjct: 133313 gccgccgccaccgtcgtcgt 133294
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>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5
          Length = 167014

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    tgccgccgccaccgtcgtcg 362
              ||||||||||||||||||||
Sbjct: 124945 tgccgccgccaccgtcgtcg 124926
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>tpg|BK003235.1| TPA: TPA_inf: Drosophila melanogaster HDC19904 (HDC19904) gene,
           complete cds
          Length = 941

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 gccgccgccaccgtcgtcgt 363
           ||||||||||||||||||||
Sbjct: 804 gccgccgccaccgtcgtcgt 785
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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128559

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   gccgccgccaccgtcgtcgt 363
             ||||||||||||||||||||
Sbjct: 74210 gccgccgccaccgtcgtcgt 74229
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>dbj|AB224379.1| Aspergillus oryzae cDNA, contig sequence: AoEST1224
          Length = 538

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 caccgtcgcgtccgacatcc 152
           ||||||||||||||||||||
Sbjct: 415 caccgtcgcgtccgacatcc 434
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>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    tcgtcgccgcggctgccgcc 211
              ||||||||||||||||||||
Sbjct: 594085 tcgtcgccgcggctgccgcc 594066
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 133     caccgtcgcgtccgacatcc 152
               ||||||||||||||||||||
Sbjct: 1627802 caccgtcgcgtccgacatcc 1627821
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 268     cggcacggcctgccgcttct 287
               ||||||||||||||||||||
Sbjct: 3404188 cggcacggcctgccgcttct 3404207
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   gccgccgccaccgtcgtcgt 363
             ||||||||||||||||||||
Sbjct: 17915 gccgccgccaccgtcgtcgt 17934
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 294      gcagggcggcggagagctcgccga 317
                |||| |||||||||||||||||||
Sbjct: 24905536 gcagcgcggcggagagctcgccga 24905513
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 344      gccgccgccaccgtcgtcgt 363
                ||||||||||||||||||||
Sbjct: 21703232 gccgccgccaccgtcgtcgt 21703251
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>ref|XM_392372.2| PREDICTED: Apis mellifera similar to ENSANGP00000021218
           (LOC408841), mRNA
          Length = 3779

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 gccgccgccaccgtcgtcgt 363
           ||||||||||||||||||||
Sbjct: 48  gccgccgccaccgtcgtcgt 29
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     gccgccgccaccgtcgtcgt 363
               ||||||||||||||||||||
Sbjct: 1447064 gccgccgccaccgtcgtcgt 1447083
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 344      gccgccgccaccgtcgtcgt 363
                ||||||||||||||||||||
Sbjct: 19769774 gccgccgccaccgtcgtcgt 19769793
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 184      ggacggcttcgtcgccgcggctgc 207
                |||||||||||||||||| |||||
Sbjct: 25694047 ggacggcttcgtcgccgctgctgc 25694024
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>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0004A09
          Length = 158826

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 184    ggacggcttcgtcgccgcggctgc 207
              |||||||||||||||||| |||||
Sbjct: 140853 ggacggcttcgtcgccgctgctgc 140830
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 298     ggcggcggagagctcgccga 317
               ||||||||||||||||||||
Sbjct: 4682288 ggcggcggagagctcgccga 4682307
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>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_G07
          Length = 149119

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   gccgccgccaccgtcgtcgt 363
             ||||||||||||||||||||
Sbjct: 78325 gccgccgccaccgtcgtcgt 78344
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>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1136H02
          Length = 145086

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    gccgccgccaccgtcgtcgt 363
              ||||||||||||||||||||
Sbjct: 126532 gccgccgccaccgtcgtcgt 126551
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>dbj|AK120039.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-E08, full
           insert sequence
          Length = 569

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 294 gcagggcggcggagagctcgccga 317
           |||| |||||||||||||||||||
Sbjct: 147 gcagcgcggcggagagctcgccga 124
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>dbj|AK106398.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-F12, full
           insert sequence
          Length = 2034

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 gccgccgccaccgtcgtcgt 363
           ||||||||||||||||||||
Sbjct: 578 gccgccgccaccgtcgtcgt 559
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>dbj|AK073473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045C05, full
           insert sequence
          Length = 2698

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gccgccgccaccgtcgtcgt 363
           ||||||||||||||||||||
Sbjct: 207 gccgccgccaccgtcgtcgt 226
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>dbj|AK072653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134L04, full
           insert sequence
          Length = 1016

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 294 gcagggcggcggagagctcgccga 317
           |||| |||||||||||||||||||
Sbjct: 597 gcagcgcggcggagagctcgccga 574
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>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    cggccccctccaggtcggcgacgg 185
              ||||| ||||||||||||||||||
Sbjct: 236321 cggcctcctccaggtcggcgacgg 236344
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>dbj|AK064058.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-F07, full
           insert sequence
          Length = 566

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 294 gcagggcggcggagagctcgccga 317
           |||| |||||||||||||||||||
Sbjct: 147 gcagcgcggcggagagctcgccga 124
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>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete
              sequence
          Length = 300051

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    gccgccgccaccgtcgtcgt 363
              ||||||||||||||||||||
Sbjct: 284773 gccgccgccaccgtcgtcgt 284754
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 145     cgacatcccgccgccgccgg 164
               ||||||||||||||||||||
Sbjct: 3484629 cgacatcccgccgccgccgg 3484648
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 39      aggggataaagaaacagaaa 58
               ||||||||||||||||||||
Sbjct: 3254596 aggggataaagaaacagaaa 3254577
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 344      gccgccgccaccgtcgtcgt 363
                ||||||||||||||||||||
Sbjct: 21714895 gccgccgccaccgtcgtcgt 21714914
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 294      gcagggcggcggagagctcgccga 317
                |||| |||||||||||||||||||
Sbjct: 24833742 gcagcgcggcggagagctcgccga 24833719
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>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132741

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 294   gcagggcggcggagagctcgccga 317
             |||| |||||||||||||||||||
Sbjct: 59332 gcagcgcggcggagagctcgccga 59355
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>emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chromosome 2, complete
             sequence
          Length = 218815

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   gccgccgccaccgtcgtcgt 363
             ||||||||||||||||||||
Sbjct: 35189 gccgccgccaccgtcgtcgt 35208
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>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12,
             complete sequence
          Length = 144455

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   gccgccgccaccgtcgtcgt 363
             ||||||||||||||||||||
Sbjct: 41144 gccgccgccaccgtcgtcgt 41163
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>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds
          Length = 8532

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 184  ggacggcttcgtcgccgcggctgc 207
            |||||||||||||||||| |||||
Sbjct: 3629 ggacggcttcgtcgccgctgctgc 3606


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,146,352
Number of Sequences: 3902068
Number of extensions: 4146352
Number of successful extensions: 96653
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94085
Number of HSP's gapped (non-prelim): 2568
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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