>ref|NM_191889.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 801

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                       
Query: 261 cccttgataagccccgcgaggagctcccctgggtcgtaaaacacctccacgtcctccgcc 320
           ||||||| ||| ||| | || ||||| |||||||||||  ||||||||||||||||||||
Sbjct: 656 cccttgagaaggccccccagtagctcgcctgggtcgtagtacacctccacgtcctccgcc 597

                                            
Query: 321 cgcagttgctcgtccaccttgagcacggcgacg 353
           ||||| ||||| ||||||||||| |||||||||
Sbjct: 596 cgcagctgctcatccaccttgaggacggcgacg 564



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 159 aaggggcaggcctgcggctgcgcgtcggcacctgatgccgacaccgtagccgcctcgcgg 218
           |||||||||||||||| ||||| | | || ||||| ||||||||  |||||||||||| |
Sbjct: 773 aaggggcaggcctgcgactgcggggccgcgcctgacgccgacacgatagccgcctcgccg 714

              
Query: 219 agc 221
           |||
Sbjct: 713 agc 711

>dbj|AK109409.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D12, full
           insert sequence
          Length = 1128

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                       
Query: 261 cccttgataagccccgcgaggagctcccctgggtcgtaaaacacctccacgtcctccgcc 320
           ||||||| ||| ||| | || ||||| |||||||||||  ||||||||||||||||||||
Sbjct: 722 cccttgagaaggccccccagtagctcgcctgggtcgtagtacacctccacgtcctccgcc 663

                                            
Query: 321 cgcagttgctcgtccaccttgagcacggcgacg 353
           ||||| ||||| ||||||||||| |||||||||
Sbjct: 662 cgcagctgctcatccaccttgaggacggcgacg 630



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 159 aaggggcaggcctgcggctgcgcgtcggcacctgatgccgacaccgtagccgcctcgcgg 218
           |||||||||||||||| ||||| | | || ||||| ||||||||  |||||||||||| |
Sbjct: 839 aaggggcaggcctgcgactgcggggccgcgcctgacgccgacacgatagccgcctcgccg 780

              
Query: 219 agc 221
           |||
Sbjct: 779 agc 777

>dbj|AK106037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D09, full
           insert sequence
          Length = 1086

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                       
Query: 261 cccttgataagccccgcgaggagctcccctgggtcgtaaaacacctccacgtcctccgcc 320
           ||||||| ||| ||| | || ||||| |||||||||||  ||||||||||||||||||||
Sbjct: 717 cccttgagaaggccccccagtagctcgcctgggtcgtagtacacctccacgtcctccgcc 658

                                            
Query: 321 cgcagttgctcgtccaccttgagcacggcgacg 353
           ||||| ||||| ||||||||||| |||||||||
Sbjct: 657 cgcagctgctcatccaccttgaggacggcgacg 625



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 159 aaggggcaggcctgcggctgcgcgtcggcacctgatgccgacaccgtagccgcctcgcgg 218
           |||||||||||||||| ||||| | | || ||||| ||||||||  |||||||||||| |
Sbjct: 834 aaggggcaggcctgcgactgcggggccgcgcctgacgccgacacgatagccgcctcgccg 775

              
Query: 219 agc 221
           |||
Sbjct: 774 agc 772

>dbj|AK061471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E01, full
           insert sequence
          Length = 1086

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                       
Query: 261 cccttgataagccccgcgaggagctcccctgggtcgtaaaacacctccacgtcctccgcc 320
           ||||||| ||| ||| | || ||||| |||||||||||  ||||||||||||||||||||
Sbjct: 717 cccttgagaaggccccccagtagctcgcctgggtcgtagtacacctccacgtcctccgcc 658

                                            
Query: 321 cgcagttgctcgtccaccttgagcacggcgacg 353
           ||||| ||||| ||||||||||| |||||||||
Sbjct: 657 cgcagctgctcatccaccttgaggacggcgacg 625



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 159 aaggggcaggcctgcggctgcgcgtcggcacctgatgccgacaccgtagccgcctcgcgg 218
           |||||||||||||||| ||||| | | || ||||| ||||||||  |||||||||||| |
Sbjct: 834 aaggggcaggcctgcgactgcggggccgcgcctgacgccgacacgatagccgcctcgccg 775

              
Query: 219 agc 221
           |||
Sbjct: 774 agc 772

>ref|NM_191890.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                       
Query: 282 agctcccctgggtcgtaaaacacctccacgtcctccgcccgcagttgctcgtccaccttg 341
           ||||| |||||||||||  ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 629 agctcgcctgggtcgtagtacacctccacgtcctccgcccgcagctgctcatccaccttg 570

                       
Query: 342 agcacggcgacg 353
           || |||||||||
Sbjct: 569 aggacggcgacg 558

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                            
Query: 261      cccttgataagccccgcgaggagctcccctgggtcgtaaaacacctccacgtcctccgcc 320
                ||||||| ||| ||| | || ||||| |||||||||||  ||||||||||||||||||||
Sbjct: 30505945 cccttgagaaggccccccagtagctcgcctgggtcgtagtacacctccacgtcctccgcc 30506004

                                   
Query: 321      cgcagttgctcgtccacct 339
                ||||| ||||| |||||||
Sbjct: 30506005 cgcagctgctcatccacct 30506023



 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                          
Query: 282      agctcccctgggtcgtaaaacacctccacgtcctccgcccgcagttgctcgtccacct 339
                ||||| |||||||||||  ||||||||||||||||||||||||| ||||| |||||||
Sbjct: 30514024 agctcgcctgggtcgtagtacacctccacgtcctccgcccgcagctgctcatccacct 30514081



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                            
Query: 159      aaggggcaggcctgcggctgcgcgtcggcacctgatgccgacaccgtagccgcctcgcgg 218
                |||||||||||||||| ||||| | | || ||||| ||||||||  |||||||||||| |
Sbjct: 30505828 aaggggcaggcctgcgactgcggggccgcgcctgacgccgacacgatagccgcctcgccg 30505887

                   
Query: 219      agc 221
                |||
Sbjct: 30505888 agc 30505890

>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435H01
          Length = 160141

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                          
Query: 261    cccttgataagccccgcgaggagctcccctgggtcgtaaaacacctccacgtcctccgcc 320
              ||||||| ||| ||| | || ||||| |||||||||||  ||||||||||||||||||||
Sbjct: 134208 cccttgagaaggccccccagtagctcgcctgggtcgtagtacacctccacgtcctccgcc 134267

                                 
Query: 321    cgcagttgctcgtccacct 339
              ||||| ||||| |||||||
Sbjct: 134268 cgcagctgctcatccacct 134286



 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                        
Query: 282    agctcccctgggtcgtaaaacacctccacgtcctccgcccgcagttgctcgtccacct 339
              ||||| |||||||||||  ||||||||||||||||||||||||| ||||| |||||||
Sbjct: 142287 agctcgcctgggtcgtagtacacctccacgtcctccgcccgcagctgctcatccacct 142344



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                          
Query: 159    aaggggcaggcctgcggctgcgcgtcggcacctgatgccgacaccgtagccgcctcgcgg 218
              |||||||||||||||| ||||| | | || ||||| ||||||||  |||||||||||| |
Sbjct: 134091 aaggggcaggcctgcgactgcggggccgcgcctgacgccgacacgatagccgcctcgccg 134150

                 
Query: 219    agc 221
              |||
Sbjct: 134151 agc 134153

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 167     ggcctgcggctgcgcgtcggc 187
               |||||||||||||||||||||
Sbjct: 2919771 ggcctgcggctgcgcgtcggc 2919791

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 167     ggcctgcggctgcgcgtcggc 187
               |||||||||||||||||||||
Sbjct: 3961642 ggcctgcggctgcgcgtcggc 3961662

>gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome 7, complete sequence
          Length = 211478

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 15     agctttcagctggtctccaaa 35
              |||||||||||||||||||||
Sbjct: 144356 agctttcagctggtctccaaa 144336

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 167     ggcctgcggctgcgcgtcggc 187
               |||||||||||||||||||||
Sbjct: 3703544 ggcctgcggctgcgcgtcggc 3703564

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 325     gttgctcgtccaccttgagcacggcgacg 353
               |||||||||| |||||||||||| |||||
Sbjct: 2378377 gttgctcgtcaaccttgagcacgtcgacg 2378405

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    gctcgtccaccttgagcacg 347
              ||||||||||||||||||||
Sbjct: 358013 gctcgtccaccttgagcacg 357994

>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08,
              complete sequence
          Length = 141535

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    ccgcctcaccgtccccctcc 254
              ||||||||||||||||||||
Sbjct: 134721 ccgcctcaccgtccccctcc 134740

>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01,
             complete sequence
          Length = 114236

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   ccgcctcaccgtccccctcc 254
             ||||||||||||||||||||
Sbjct: 23975 ccgcctcaccgtccccctcc 23994

>ref|XM_838093.1| Leishmania major strain Friedlin rRNA dimethyltransferase
           (LMJ_1009) partial mRNA
          Length = 1395

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 gctcgtccaccttgagcacg 347
           ||||||||||||||||||||
Sbjct: 415 gctcgtccaccttgagcacg 396

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 5       agttgaactgagctttcagc 24
               ||||||||||||||||||||
Sbjct: 1652648 agttgaactgagctttcagc 1652629

>emb|AL596110.15| Mouse DNA sequence from clone RP23-330N10 on chromosome 11 Contains the
              3' end of a variant of the gene for a novel protein similar
              to human sperm antigen HCMOGT-1 (B230396K10Rik), the
              Adora2b gene for adenosine A2b receptor, the gene for a
              novel protein (2410012H22Rik), a somatic cytochrome c
              (Cycs) pseudogene, a novel gene, a novel pseudogene, the
              gene for a novel protein (2810460C24Rik), the 3' end of the
              Ncor1 gene for nuclear receptor co-repressor 1 and two CpG
              islands, complete sequence
          Length = 214834

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     aacactggagactcgacacg 110
              ||||||||||||||||||||
Sbjct: 123557 aacactggagactcgacacg 123576

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 235      ccgcctcaccgtccccctcc 254
                ||||||||||||||||||||
Sbjct: 22825271 ccgcctcaccgtccccctcc 22825290

>gb|AC093704.1| Gallus gallus clone WAG-38H9, complete sequence
          Length = 89724

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    acagggatgcaacagcaaca 85
             ||||||||||||||||||||
Sbjct: 62662 acagggatgcaacagcaaca 62681

>emb|AL356456.1|LMFLUNK01 Leishmania major Friedlin cosmid clones L9127,L3286,L3175,L8286,L7480,
             incomplete shotgun, assembled reads, with VERY preliminary
             annotation, complete sequence
          Length = 139597

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   gctcgtccaccttgagcacg 347
             ||||||||||||||||||||
Sbjct: 35803 gctcgtccaccttgagcacg 35822


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,210,368
Number of Sequences: 3902068
Number of extensions: 2210368
Number of successful extensions: 39985
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39737
Number of HSP's gapped (non-prelim): 248
length of query: 353
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 331
effective length of database: 17,147,199,772
effective search space: 5675723124532
effective search space used: 5675723124532
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)