ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450707.1| Oryza sativa (japonica cultivar-group), mRNA 170 3e-39
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
3dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
4dbj|AK063842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
5gb|AY112321.1| Zea mays CL30593_1 mRNA sequence 58 3e-05
6gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 50 0.007
7tpg|BK001044.1| TPA: TPA_exp: Microbulbifer degradans 2-40 chiti... 50 0.007
8gb|AC149778.2| Bos taurus BAC CH240-9E7 (Children's Hospital Oa... 42 1.8
9gb|AC114678.20| Mus musculus chromosome 10, clone RP24-213L12, c... 42 1.8
10gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, comp... 42 1.8
11gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Can... 42 1.8
12gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.8
13gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complet... 42 1.8
14gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complet... 42 1.8
15gb|DQ120633.1| Hylobates lar KIF4B gene, partial cds 42 1.8
16gb|DQ120632.1| Pongo pygmaeus KIF4B gene, partial cds 42 1.8
17ref|XM_470922.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
18ref|XM_470921.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
19ref|XM_466992.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
20gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
21gb|AC166643.7| Mus musculus chromosome 18, clone RP24-241J8, com... 40 7.1
22ref|XM_367208.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.1
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.1
24ref|XM_989629.1| PREDICTED: Mus musculus janus kinase and microt... 40 7.1
25ref|XM_922928.2| PREDICTED: Mus musculus janus kinase and microt... 40 7.1
26ref|XM_129010.5| PREDICTED: Mus musculus janus kinase and microt... 40 7.1
27ref|XM_752711.1| Ustilago maydis 521 hypothetical protein (UM016... 40 7.1
28gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome... 40 7.1
29ref|XM_544224.2| PREDICTED: Canis familiaris similar to AF-10 pr... 40 7.1
30emb|CR663318.2|CNS0FASC Tetraodon nigroviridis full-length cDNA 40 7.1
31gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.1
32emb|AL357894.6| Human DNA sequence from clone RP11-576P23 on chr... 40 7.1
33gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genom... 40 7.1
34emb|X64346.1|HSGEND Saimiriine herpesvirus 2 complete genome 40 7.1
35emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.1
36gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, co... 40 7.1
37gb|AC144716.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
38emb|AJ410493.1|SHE410493 Saimiriine herpesvirus 2 complete L-DNA... 40 7.1
39gb|AC024610.6| Homo sapiens chromosome 17, clone RP11-17M24, com... 40 7.1
40gb|AC092945.6| Homo sapiens 12 BAC RP11-290O5 (Roswell Park Canc... 40 7.1
41gb|AC005170.3| Arabidopsis thaliana chromosome 2 clone T29E15 ma... 40 7.1
42gb|AC078907.7| Homo sapiens chromosome 17, clone RP11-160L11, co... 40 7.1
43gb|AC090312.7| Homo sapiens chromosome 18, clone RP11-752P2, com... 40 7.1
44gb|AC092183.6| Homo sapiens 12p BAC RP11-6K23 (Roswell Park Canc... 40 7.1
45dbj|AK133750.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 7.1
46gb|AC092067.2| Homo sapiens chromosome 19 clone CTB-184G21, comp... 40 7.1
47gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.1
48dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
49dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
50dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
51dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
52dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
53gb|AC007966.3| Homo sapiens BAC clone RP11-334K17 from 2, comple... 40 7.1
54gb|AC012453.7| Homo sapiens BAC clone RP11-424P4 from 2, complet... 40 7.1
55dbj|AP005925.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
56dbj|AP006456.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
57dbj|AP006459.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
58dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
59dbj|AP004256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
60dbj|AK070839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
61dbj|AK066504.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
62gb|AC101962.7| Mus musculus chromosome 3, clone RP24-222A19, com... 40 7.1
63gb|AC003030.1|AC003030 Homo sapiens chromosome 19, overlapping c... 40 7.1
64gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
65gb|AF000403.1|AF000403 Lotus japonicus putative cytochorome P450... 40 7.1
66gb|AC113507.12| Mus musculus chromosome 3, clone RP23-376O10, co... 40 7.1
67gb|M31122.1|HSVSPOLGBP Herpesvirus saimiri major DNA binding pro... 40 7.1 
>ref|XM_450707.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1024

 Score =  170 bits (86), Expect = 3e-39
 Identities = 191/225 (84%), Gaps = 2/225 (0%)
 Strand = Plus / Minus

                                                                       
Query: 234 gcagcatcaccaccaggtg--cctcagttggaggaggcaccaaaaaccctgatcctctcc 291
           |||||| ||||||||||||  ||||||||||||  ||| |||||||||||||||||||||
Sbjct: 696 gcagcaccaccaccaggtgaccctcagttggagctggcgccaaaaaccctgatcctctcc 637

                                                                       
Query: 292 tcgatcttggcgttgcagctggggcagcgaaccgcgcctttctcctcatgctgcttgtta 351
           ||||  ||||| ||||||| |||||| ||  || |||| ||||||||||||  |||||| 
Sbjct: 636 tcgactttggcattgcagcaggggcaccgggccacgcccttctcctcatgcctcttgttg 577

                                                                       
Query: 352 cagcctacacacagcacctggtgagcacactgcagcagcatcacgcaagcctcctccctc 411
           || || || || ||||||||||| || ||||| ||||| |||||||| ||||||||||||
Sbjct: 576 caaccgacgcagagcacctggtgggcgcactgaagcaggatcacgcacgcctcctccctc 517

                                                        
Query: 412 ttgcagatcatgcagcctctgcggcggcctgtattctggataggc 456
           |||||||||| |||| | ||||| |||| ||| |||||| |||||
Sbjct: 516 ttgcagatcacgcagtccctgcgacggcttgtcttctgggtaggc 472
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  170 bits (86), Expect = 3e-39
 Identities = 191/225 (84%), Gaps = 2/225 (0%)
 Strand = Plus / Minus

                                                                            
Query: 234      gcagcatcaccaccaggtg--cctcagttggaggaggcaccaaaaaccctgatcctctcc 291
                |||||| ||||||||||||  ||||||||||||  ||| |||||||||||||||||||||
Sbjct: 12333876 gcagcaccaccaccaggtgaccctcagttggagctggcgccaaaaaccctgatcctctcc 12333817

                                                                            
Query: 292      tcgatcttggcgttgcagctggggcagcgaaccgcgcctttctcctcatgctgcttgtta 351
                ||||  ||||| ||||||| |||||| ||  || |||| ||||||||||||  |||||| 
Sbjct: 12333816 tcgactttggcattgcagcaggggcaccgggccacgcccttctcctcatgcctcttgttg 12333757

                                                                            
Query: 352      cagcctacacacagcacctggtgagcacactgcagcagcatcacgcaagcctcctccctc 411
                || || || || ||||||||||| || ||||| ||||| |||||||| ||||||||||||
Sbjct: 12333756 caaccgacgcagagcacctggtgggcgcactgaagcaggatcacgcacgcctcctccctc 12333697

                                                             
Query: 412      ttgcagatcatgcagcctctgcggcggcctgtattctggataggc 456
                |||||||||| |||| | ||||| |||| ||| |||||| |||||
Sbjct: 12333696 ttgcagatcacgcagtccctgcgacggcttgtcttctgggtaggc 12333652
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>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score =  170 bits (86), Expect = 3e-39
 Identities = 191/225 (84%), Gaps = 2/225 (0%)
 Strand = Plus / Minus

                                                                          
Query: 234    gcagcatcaccaccaggtg--cctcagttggaggaggcaccaaaaaccctgatcctctcc 291
              |||||| ||||||||||||  ||||||||||||  ||| |||||||||||||||||||||
Sbjct: 117430 gcagcaccaccaccaggtgaccctcagttggagctggcgccaaaaaccctgatcctctcc 117371

                                                                          
Query: 292    tcgatcttggcgttgcagctggggcagcgaaccgcgcctttctcctcatgctgcttgtta 351
              ||||  ||||| ||||||| |||||| ||  || |||| ||||||||||||  |||||| 
Sbjct: 117370 tcgactttggcattgcagcaggggcaccgggccacgcccttctcctcatgcctcttgttg 117311

                                                                          
Query: 352    cagcctacacacagcacctggtgagcacactgcagcagcatcacgcaagcctcctccctc 411
              || || || || ||||||||||| || ||||| ||||| |||||||| ||||||||||||
Sbjct: 117310 caaccgacgcagagcacctggtgggcgcactgaagcaggatcacgcacgcctcctccctc 117251

                                                           
Query: 412    ttgcagatcatgcagcctctgcggcggcctgtattctggataggc 456
              |||||||||| |||| | ||||| |||| ||| |||||| |||||
Sbjct: 117250 ttgcagatcacgcagtccctgcgacggcttgtcttctgggtaggc 117206
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>dbj|AK063842.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-C02, full
           insert sequence
          Length = 1024

 Score =  170 bits (86), Expect = 3e-39
 Identities = 191/225 (84%), Gaps = 2/225 (0%)
 Strand = Plus / Minus

                                                                       
Query: 234 gcagcatcaccaccaggtg--cctcagttggaggaggcaccaaaaaccctgatcctctcc 291
           |||||| ||||||||||||  ||||||||||||  ||| |||||||||||||||||||||
Sbjct: 696 gcagcaccaccaccaggtgaccctcagttggagctggcgccaaaaaccctgatcctctcc 637

                                                                       
Query: 292 tcgatcttggcgttgcagctggggcagcgaaccgcgcctttctcctcatgctgcttgtta 351
           ||||  ||||| ||||||| |||||| ||  || |||| ||||||||||||  |||||| 
Sbjct: 636 tcgactttggcattgcagcaggggcaccgggccacgcccttctcctcatgcctcttgttg 577

                                                                       
Query: 352 cagcctacacacagcacctggtgagcacactgcagcagcatcacgcaagcctcctccctc 411
           || || || || ||||||||||| || ||||| ||||| |||||||| ||||||||||||
Sbjct: 576 caaccgacgcagagcacctggtgggcgcactgaagcaggatcacgcacgcctcctccctc 517

                                                        
Query: 412 ttgcagatcatgcagcctctgcggcggcctgtattctggataggc 456
           |||||||||| |||| | ||||| |||| ||| |||||| |||||
Sbjct: 516 ttgcagatcacgcagtccctgcgacggcttgtcttctgggtaggc 472
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>gb|AY112321.1| Zea mays CL30593_1 mRNA sequence
          Length = 653

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 134/169 (79%)
 Strand = Plus / Plus

                                                                       
Query: 249 ggtgcctcagttggaggaggcaccaaaaaccctgatcctctcctcgatcttggcgttgca 308
           ||||||||||||||||   || || ||||||||||| ||||| ||||  |  ||| ||||
Sbjct: 214 ggtgcctcagttggagctcgctccgaaaaccctgattctctcttcgacttcagcgctgca 273

                                                                       
Query: 309 gctggggcagcgaaccgcgcctttctcctcatgctgcttgttacagcctacacacagcac 368
           || ||||||||||     |||||| || |||||| |||| || ||||| ||||| || ||
Sbjct: 274 gcaggggcagcgagtgatgcctttatcttcatgcagcttattgcagccaacacagaggac 333

                                                            
Query: 369 ctggtgagcacactgcagcagcatcacgcaagcctcctccctcttgcag 417
           |||||| |||||||| || || ||||| || ||| || || ||||||||
Sbjct: 334 ctggtgggcacactggagtaggatcacacacgccgccgccttcttgcag 382
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 502     ttgggtgcccgcactgtattgcggt 526
               |||||||||||||||||||||||||
Sbjct: 4568359 ttgggtgcccgcactgtattgcggt 4568335
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>tpg|BK001044.1| TPA: TPA_exp: Microbulbifer degradans 2-40 chitinase C (chiC) gene,
           complete cds
          Length = 2379

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 502 ttgggtgcccgcactgtattgcggt 526
           |||||||||||||||||||||||||
Sbjct: 564 ttgggtgcccgcactgtattgcggt 540
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>gb|AC149778.2| Bos taurus  BAC CH240-9E7 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 138869

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    cctgttcaacttttcgaccaa 42
             |||||||||||||||||||||
Sbjct: 77529 cctgttcaacttttcgaccaa 77509
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>gb|AC114678.20| Mus musculus chromosome 10, clone RP24-213L12, complete sequence
          Length = 180079

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 449   ggataggctcctgctgcctgt 469
             |||||||||||||||||||||
Sbjct: 93556 ggataggctcctgctgcctgt 93536
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>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence
          Length = 174676

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 350  tacagcctacacacagcacct 370
            |||||||||||||||||||||
Sbjct: 2791 tacagcctacacacagcacct 2811
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>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 125400

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   gacatataactctttcttcac 159
             |||||||||||||||||||||
Sbjct: 27630 gacatataactctttcttcac 27650
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 384    cagcagcatcacgcaagcctc 404
              |||||||||||||||||||||
Sbjct: 291081 cagcagcatcacgcaagcctc 291101
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>gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complete sequence
          Length = 208477

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 245    accaggtgcctcagttggaggaggc 269
              |||||||||||||| ||||||||||
Sbjct: 187076 accaggtgcctcaggtggaggaggc 187052
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>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 473    atgtgggcggtgccttctggt 493
              |||||||||||||||||||||
Sbjct: 123815 atgtgggcggtgccttctggt 123835
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>gb|DQ120633.1| Hylobates lar KIF4B gene, partial cds
          Length = 3556

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 362  acagcacctggtgagcacactgcag 386
            |||||| ||||||||||||||||||
Sbjct: 2868 acagcagctggtgagcacactgcag 2892
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>gb|DQ120632.1| Pongo pygmaeus KIF4B gene, partial cds
          Length = 3556

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 362  acagcacctggtgagcacactgcag 386
            |||||| ||||||||||||||||||
Sbjct: 2868 acagcagctggtgagcacactgcag 2892
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>ref|XM_470922.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1676

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 233 agcagcatcaccaccaggtgcctc 256
           ||||||||| ||||||||||||||
Sbjct: 95  agcagcatcgccaccaggtgcctc 72
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>ref|XM_470921.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1686

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 233 agcagcatcaccaccaggtgcctc 256
           ||||||||| ||||||||||||||
Sbjct: 95  agcagcatcgccaccaggtgcctc 72
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>ref|XM_466992.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2433

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ctgcagcagcatcaccacca 248
           ||||||||||||||||||||
Sbjct: 376 ctgcagcagcatcaccacca 395
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>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0091I11, complete sequence
          Length = 135993

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tgctcctgttcaacttttcg 37
             ||||||||||||||||||||
Sbjct: 70290 tgctcctgttcaacttttcg 70271
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>gb|AC166643.7| Mus musculus chromosome 18, clone RP24-241J8, complete sequence
          Length = 173501

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 383   gcagcagcatcacgcaagcctcctccctcttg 414
             |||||||||||||   ||||||||||||||||
Sbjct: 63317 gcagcagcatcacttgagcctcctccctcttg 63286
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>ref|XM_367208.1| Magnaporthe grisea 70-15 hypothetical protein (MG07133.4) partial
           mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 279 cctgatcctctcctcgatcttggc 302
           ||||||| ||||||||||||||||
Sbjct: 801 cctgatcatctcctcgatcttggc 778
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 233      agcagcatcaccaccaggtgcctc 256
                ||||||||| ||||||||||||||
Sbjct: 16386342 agcagcatcgccaccaggtgcctc 16386319
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>ref|XM_989629.1| PREDICTED: Mus musculus janus kinase and microtubule interacting
           protein 2 (Jakmip2), mRNA
          Length = 3429

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 383 gcagcagcatcacgcaagcctcctccctcttg 414
           |||||||||||||   ||||||||||||||||
Sbjct: 110 gcagcagcatcacttgagcctcctccctcttg 79
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>ref|XM_922928.2| PREDICTED: Mus musculus janus kinase and microtubule interacting
           protein 2, transcript variant 4 (Jakmip2), mRNA
          Length = 3429

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 383 gcagcagcatcacgcaagcctcctccctcttg 414
           |||||||||||||   ||||||||||||||||
Sbjct: 110 gcagcagcatcacttgagcctcctccctcttg 79
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>ref|XM_129010.5| PREDICTED: Mus musculus janus kinase and microtubule interacting
           protein 2, transcript variant 1 (Jakmip2), mRNA
          Length = 3429

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 383 gcagcagcatcacgcaagcctcctccctcttg 414
           |||||||||||||   ||||||||||||||||
Sbjct: 110 gcagcagcatcacttgagcctcctccctcttg 79
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>ref|XM_752711.1| Ustilago maydis 521 hypothetical protein (UM01657.1) partial mRNA
          Length = 5787

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  ccctgatcctctcctcgatc 297
            ||||||||||||||||||||
Sbjct: 2644 ccctgatcctctcctcgatc 2625
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>gb|AC125155.4| Mus musculus BAC clone RP24-380D9 from chromosome 6, complete sequence
          Length = 173003

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   gaaaccaagtctgcagcagc 238
             ||||||||||||||||||||
Sbjct: 90209 gaaaccaagtctgcagcagc 90190
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>ref|XM_544224.2| PREDICTED: Canis familiaris similar to AF-10 protein (LOC487096),
            mRNA
          Length = 3267

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  tgcagcagcatcaccaccag 249
            ||||||||||||||||||||
Sbjct: 3023 tgcagcagcatcaccaccag 3042
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>emb|CR663318.2|CNS0FASC Tetraodon nigroviridis full-length cDNA
          Length = 853

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 3   ctcaaagggttcctctgctcctgt 26
           |||||| |||||||||||||||||
Sbjct: 836 ctcaaaaggttcctctgctcctgt 813
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     tgcagcagcatcaccaccag 249
               ||||||||||||||||||||
Sbjct: 3667512 tgcagcagcatcaccaccag 3667493
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>emb|AL357894.6| Human DNA sequence from clone RP11-576P23 on chromosome Xp11.21-11.23
             Contains a novel gene and a CpG island, complete sequence
          Length = 154847

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    gaatgtacccatataccccc 71
             ||||||||||||||||||||
Sbjct: 39762 gaatgtacccatataccccc 39743
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>gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genomic sequence, complete
             sequence
          Length = 146775

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 233   agcagcatcaccaccaggtgcctc 256
             ||||||||| ||||||||||||||
Sbjct: 80868 agcagcatcgccaccaggtgcctc 80891
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>emb|X64346.1|HSGEND Saimiriine herpesvirus 2 complete genome
          Length = 112930

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   atataactctttcttcacaa 161
             ||||||||||||||||||||
Sbjct: 24665 atataactctttcttcacaa 24646
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 231     gcagcagcatcaccaccagg 250
               ||||||||||||||||||||
Sbjct: 3153577 gcagcagcatcaccaccagg 3153558
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>gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, complete sequence
          Length = 233775

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 226   agtctgcagcagcatcaccaccag 249
             ||||||||||||||||||| ||||
Sbjct: 56170 agtctgcagcagcatcacctccag 56147
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>gb|AC144716.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0108D09, complete sequence
          Length = 127371

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tgctcctgttcaacttttcg 37
             ||||||||||||||||||||
Sbjct: 34717 tgctcctgttcaacttttcg 34736
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>emb|AJ410493.1|SHE410493 Saimiriine herpesvirus 2 complete L-DNA sequence, strain C488
          Length = 113027

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   atataactctttcttcacaa 161
             ||||||||||||||||||||
Sbjct: 24390 atataactctttcttcacaa 24371
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>gb|AC024610.6| Homo sapiens chromosome 17, clone RP11-17M24, complete sequence
          Length = 176291

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    tttatctttgccccaagaga 220
              ||||||||||||||||||||
Sbjct: 158066 tttatctttgccccaagaga 158047
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>gb|AC092945.6| Homo sapiens 12 BAC RP11-290O5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aactctttcttcacaaaggt 165
             ||||||||||||||||||||
Sbjct: 39935 aactctttcttcacaaaggt 39954
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>gb|AC005170.3| Arabidopsis thaliana chromosome 2 clone T29E15 map CIC06C07, complete
             sequence
          Length = 108056

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 177   agacaaagatgaccacgagtttag 200
             ||||||||||||||||| ||||||
Sbjct: 97859 agacaaagatgaccacgtgtttag 97882
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>gb|AC078907.7| Homo sapiens chromosome 17, clone RP11-160L11, complete sequence
          Length = 104234

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   tttatctttgccccaagaga 220
             ||||||||||||||||||||
Sbjct: 68576 tttatctttgccccaagaga 68595
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>gb|AC090312.7| Homo sapiens chromosome 18, clone RP11-752P2, complete sequence
          Length = 171438

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   cctttctcctcatgctgctt 347
             ||||||||||||||||||||
Sbjct: 61201 cctttctcctcatgctgctt 61182
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>gb|AC092183.6| Homo sapiens 12p BAC RP11-6K23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160015

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   aggtgcctcagttggaggag 267
             ||||||||||||||||||||
Sbjct: 95073 aggtgcctcagttggaggag 95092
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>dbj|AK133750.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730405I01 product:hypothetical
           protein, full insert sequence
          Length = 3377

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 383 gcagcagcatcacgcaagcctcctccctcttg 414
           |||||||||||||   ||||||||||||||||
Sbjct: 75  gcagcagcatcacttgagcctcctccctcttg 44
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>gb|AC092067.2| Homo sapiens chromosome 19 clone CTB-184G21, complete sequence
          Length = 61958

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 215  aagagaaaccaagtctgcagcagc 238
            ||||| ||||||||||||||||||
Sbjct: 4480 aagagcaaccaagtctgcagcagc 4457
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     tgcagcagcatcaccaccag 249
               ||||||||||||||||||||
Sbjct: 2399429 tgcagcagcatcaccaccag 2399448
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 18       tgctcctgttcaacttttcg 37
                ||||||||||||||||||||
Sbjct: 23644768 tgctcctgttcaacttttcg 23644749



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      tgctcctgttcaacttttcg 37
               ||||||||||||||||||||
Sbjct: 7611204 tgctcctgttcaacttttcg 7611185
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 18       tgctcctgttcaacttttcg 37
                ||||||||||||||||||||
Sbjct: 14760591 tgctcctgttcaacttttcg 14760610
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 18       tgctcctgttcaacttttcg 37
                ||||||||||||||||||||
Sbjct: 27263879 tgctcctgttcaacttttcg 27263860
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 233      agcagcatcaccaccaggtgcctc 256
                ||||||||| ||||||||||||||
Sbjct: 16379975 agcagcatcgccaccaggtgcctc 16379952
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 380      actgcagcagcatcacgcaa 399
                ||||||||||||||||||||
Sbjct: 35011042 actgcagcagcatcacgcaa 35011023
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>gb|AC007966.3| Homo sapiens BAC clone RP11-334K17 from 2, complete sequence
          Length = 165749

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   caccaggtgcctcagttgga 263
             ||||||||||||||||||||
Sbjct: 61504 caccaggtgcctcagttgga 61485
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>gb|AC012453.7| Homo sapiens BAC clone RP11-424P4 from 2, complete sequence
          Length = 28722

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 469   ttggatgtgggcggtgccttctgg 492
             ||||||||||| ||||||||||||
Sbjct: 17411 ttggatgtgggtggtgccttctgg 17434
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>dbj|AP005925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0030G18
          Length = 167557

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tgctcctgttcaacttttcg 37
             ||||||||||||||||||||
Sbjct: 52678 tgctcctgttcaacttttcg 52697
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>dbj|AP006456.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0030A22
          Length = 141096

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    tgctcctgttcaacttttcg 37
             ||||||||||||||||||||
Sbjct: 55747 tgctcctgttcaacttttcg 55728
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>dbj|AP006459.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0084D17
          Length = 143931

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     tgctcctgttcaacttttcg 37
              ||||||||||||||||||||
Sbjct: 129098 tgctcctgttcaacttttcg 129079
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>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643F09
          Length = 161001

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   actgcagcagcatcacgcaa 399
             ||||||||||||||||||||
Sbjct: 71383 actgcagcagcatcacgcaa 71364
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>dbj|AP004256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1224_G08
          Length = 113496

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tgctcctgttcaacttttcg 37
              ||||||||||||||||||||
Sbjct: 105170 tgctcctgttcaacttttcg 105189
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>dbj|AK070839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073G11, full
           insert sequence
          Length = 1936

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 233 agcagcatcaccaccaggtgcctc 256
           ||||||||| ||||||||||||||
Sbjct: 163 agcagcatcgccaccaggtgcctc 140
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>dbj|AK066504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073G20, full
           insert sequence
          Length = 2433

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ctgcagcagcatcaccacca 248
           ||||||||||||||||||||
Sbjct: 376 ctgcagcagcatcaccacca 395
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>gb|AC101962.7| Mus musculus chromosome 3, clone RP24-222A19, complete sequence
          Length = 198284

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   tgacatataactctttcttc 157
             ||||||||||||||||||||
Sbjct: 88752 tgacatataactctttcttc 88771
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>gb|AC003030.1|AC003030 Homo sapiens chromosome 19, overlapping cosmids R29828 and F25496,
             complete sequence
          Length = 60966

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 215   aagagaaaccaagtctgcagcagc 238
             ||||| ||||||||||||||||||
Sbjct: 58941 aagagcaaccaagtctgcagcagc 58918
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 18       tgctcctgttcaacttttcg 37
                ||||||||||||||||||||
Sbjct: 23954704 tgctcctgttcaacttttcg 23954685



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      tgctcctgttcaacttttcg 37
               ||||||||||||||||||||
Sbjct: 7681291 tgctcctgttcaacttttcg 7681272
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>gb|AF000403.1|AF000403 Lotus japonicus putative cytochorome P450 mRNA, partial cds
          Length = 1641

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 334  tcctcatgctgcttgttaca 353
            ||||||||||||||||||||
Sbjct: 1537 tcctcatgctgcttgttaca 1556
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>gb|AC113507.12| Mus musculus chromosome 3, clone RP23-376O10, complete sequence
          Length = 210262

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    tgacatataactctttcttc 157
              ||||||||||||||||||||
Sbjct: 197809 tgacatataactctttcttc 197828
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>gb|M31122.1|HSVSPOLGBP Herpesvirus saimiri major DNA binding protein, glycoprotein B and DNA
             polymerase and other genes, complete cds
          Length = 16325

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   atataactctttcttcacaa 161
             ||||||||||||||||||||
Sbjct: 13164 atataactctttcttcacaa 13145


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,182,690
Number of Sequences: 3902068
Number of extensions: 5182690
Number of successful extensions: 97189
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96719
Number of HSP's gapped (non-prelim): 466
length of query: 526
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 503
effective length of database: 17,143,297,704
effective search space: 8623078745112
effective search space used: 8623078745112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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