>ATL1M_ARATH (P0C035) Putative RING-H2 finger protein ATL1M|
          Length = 310

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -3

Query: 242 CILCLVADLPPLKTMSLLPRLGYFIEQQKLNMWAKRITLFKLCN*TVGRVGGEANGG 72
           C +CL +DL       +LPR  +      ++MW +  +   LC  TVG V    +GG
Sbjct: 120 CAVCL-SDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGG 175

>STON2_MOUSE (Q8BZ60) Stonin-2 (Stoned B)|
          Length = 895

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 124 NRVIRFAHILSFCCSIKYPSLGNNDIVLSGGKSATKHKIHP 246
           + V+   HILSF   +    LG NDI++ G +  ++  I P
Sbjct: 590 HHVLTRIHILSFLSGLAECRLGLNDILIKGNEIVSRQDIMP 630

>SYA_ARCFU (O28029) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 906

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
 Frame = +3

Query: 33  GLFGHVKAE------PSMVTTVGLSTYSAHGLIT*FKQGYSFCPHIKLLLF 167
           G+ G ++ E       S+  TVG+S     G++   ++ YS   H + +LF
Sbjct: 299 GIMGELRGERLNQLRKSVADTVGVSVEELEGIVVPLEKVYSLADHTRCILF 349

>WZYE_YERPS (Q66G06) Putative ECA polymerase|
          Length = 454

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 190 YQGLGILLNNKSLICGQNE*PCLN--YVIKPWAE*VERPTVVTIDGSAFTW 44
           ++ LG+LL N   I  Q   P +   YV  P A   ERP +V    + FTW
Sbjct: 271 WENLGLLLQNYDKIDFQGLAPIVRDFYVFIPSALWPERPDLVLNTANYFTW 321

>WZYE_YERPE (Q8ZAF1) Putative ECA polymerase|
          Length = 454

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 190 YQGLGILLNNKSLICGQNE*PCLN--YVIKPWAE*VERPTVVTIDGSAFTW 44
           ++ LG+LL N   I  Q   P +   YV  P A   ERP +V    + FTW
Sbjct: 271 WENLGLLLQNYDKIDFQGLAPIVRDFYVFIPSALWPERPDLVLNTANYFTW 321

>STON2_HUMAN (Q8WXE9) Stonin-2 (Stoned B)|
          Length = 905

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 124 NRVIRFAHILSFCCSIKYPSLGNNDIVLSGGKSATKHKIHP 246
           + V+   HILSF   +    LG NDI++ G +   +  I P
Sbjct: 593 HHVLTRIHILSFLSGLAECRLGLNDILVKGNEIVLRQDIMP 633


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,760,750
Number of Sequences: 219361
Number of extensions: 761411
Number of successful extensions: 1680
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)