ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MDH_CAMJE (Q9PHY2) Probable malate dehydrogenase (EC 1.1.1.37) 29 4.6

>MDH_CAMJE (Q9PHY2) Probable malate dehydrogenase (EC 1.1.1.37)|
          Length = 300

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -2

Query: 263 GRAREELPVENTA*RLPCRKLVRALLESPYVVL----VDFYAYILY 138
           G++REEL   NT+  L C K ++   E P  ++    VDF    LY
Sbjct: 84  GQSREELLQLNTSIMLDCAKKIKDFTEDPLFIILTNPVDFLLNTLY 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,073,177
Number of Sequences: 219361
Number of extensions: 866345
Number of successful extensions: 2017
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2017
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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