>gb|AC025774.5| Homo sapiens chromosome 5 clone CTD-2292N2, complete sequence
          Length = 155092

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 202   aacttcctacatggcaatcttca 224
             |||||||||||||||||||||||
Sbjct: 20929 aacttcctacatggcaatcttca 20907

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 333     tggccctggtagcctggtgcaccacca 359
               ||||| |||||||||||||||||||||
Sbjct: 2436863 tggccttggtagcctggtgcaccacca 2436889

>gb|AC116340.3| Homo sapiens chromosome 5 clone RP11-118I21, complete sequence
          Length = 160144

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 202    aacttcctacatggcaatcttca 224
              |||||||||||||||||||||||
Sbjct: 154811 aacttcctacatggcaatcttca 154789

>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0095O23
          Length = 159792

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 333    tggccctggtagcctggtgcaccacca 359
              ||||| |||||||||||||||||||||
Sbjct: 115273 tggccttggtagcctggtgcaccacca 115299

>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0406E03
          Length = 201069

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 333   tggccctggtagcctggtgcaccacca 359
             ||||| |||||||||||||||||||||
Sbjct: 23453 tggccttggtagcctggtgcaccacca 23479

>dbj|AK109362.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E06, full
            insert sequence
          Length = 1353

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 333  tggccctggtagcctggtgcaccacca 359
            ||||| |||||||||||||||||||||
Sbjct: 1130 tggccttggtagcctggtgcaccacca 1104

>dbj|AK098936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036D20, full
            insert sequence
          Length = 1435

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 333  tggccctggtagcctggtgcaccacca 359
            ||||| |||||||||||||||||||||
Sbjct: 1128 tggccttggtagcctggtgcaccacca 1102

>dbj|AK072233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001H21, full
            insert sequence
          Length = 1435

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 333  tggccctggtagcctggtgcaccacca 359
            ||||| |||||||||||||||||||||
Sbjct: 1128 tggccttggtagcctggtgcaccacca 1102

>emb|AL034397.1|HS159A1 Human DNA sequence from clone RP6-159A1 on chromosome Xq12-13.3
             Contains the gene for Ig superfamily protein (Z39IG), a
             novel gene, a heterogenous nuclear ribonucleoprotein G
             pseudogene and a CpG island, complete sequence
          Length = 115218

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 9     aatacggaaacaaataacaaagctct 34
             ||||||||||||||||| ||||||||
Sbjct: 97071 aatacggaaacaaataagaaagctct 97096

>ref|XM_939347.1| PREDICTED: Homo sapiens similar to RNA binding motif protein,
          X-linked (LOC650253), mRNA
          Length = 417

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 9  aatacggaaacaaataacaaagctct 34
          ||||||||||||||||| ||||||||
Sbjct: 46 aatacggaaacaaataagaaagctct 71

>ref|XM_928459.1| PREDICTED: Homo sapiens similar to RNA binding motif protein,
          X-linked (LOC645420), mRNA
          Length = 417

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 9  aatacggaaacaaataacaaagctct 34
          ||||||||||||||||| ||||||||
Sbjct: 46 aatacggaaacaaataagaaagctct 71

>emb|BX470214.6| Zebrafish DNA sequence from clone DKEY-27M7 in linkage group 18,
             complete sequence
          Length = 234545

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 146   tatatgcataaaagtccacgag 167
             ||||||||||||||||||||||
Sbjct: 66626 tatatgcataaaagtccacgag 66647

>gb|AC004051.1|AC004051 Homo sapiens chromosome 4 clone B208G5 map 4q25, complete sequence
          Length = 147665

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 9     aatacggaaacaaataacaaagctct 34
             ||||||||||||||||| ||||||||
Sbjct: 64393 aatacggaaacaaataagaaagctct 64418

>emb|AL021154.1|HS150O5 Human DNA sequence from clone RP1-150O5 on chromosome 1p36.13-36.22
             Contains the 5' end of the gene for  up-regulated in liver
             cancer 1 (UPLC1) (FLJ34972), the E2F2 gene for E2F
             transcription factor 2, the ID3 gene for inhibitor of DNA
             binding 3 dominant negative helix-loop-helix protein, a
             novel gene and two CpG islands, complete sequence
          Length = 129722

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 380   ttggtagggaggaggctggtt 400
             |||||||||||||||||||||
Sbjct: 23558 ttggtagggaggaggctggtt 23578

>ref|XM_523457.1| PREDICTED: Pan troglodytes similar to Zinc finger protein 469
            (LOC468066), mRNA
          Length = 9939

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  acctggctggccctggtagc 345
            ||||||||||||||||||||
Sbjct: 1179 acctggctggccctggtagc 1160

>gb|AC134248.3| Mus musculus BAC clone RP23-338G21 from chromosome 9, complete sequence
          Length = 206805

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   ggttacctggctggccctgg 341
             ||||||||||||||||||||
Sbjct: 22420 ggttacctggctggccctgg 22439

>gb|AC115292.5| Mus musculus BAC clone RP23-73F10 from chromosome 14, complete sequence
          Length = 212983

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    aaacaaataacaaagctctg 35
             ||||||||||||||||||||
Sbjct: 20705 aaacaaataacaaagctctg 20686

>ref|XM_814341.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053511367.310) partial mRNA
          Length = 1467

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 287 ggcgttgttgtagttaccgccacc 310
           ||||||||||| ||||||||||||
Sbjct: 297 ggcgttgttgttgttaccgccacc 274

>emb|AL354820.18| Human DNA sequence from clone RP11-550E22 on chromosome 13 Contains
             part of a novel gene, the 5' end of the DDX26 gene for
             DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26 (HDB,
             DBI-1, DICE1, NOTCHL2,Notchl2, DKFZP434B105), part of a
             novel gene, a ribosomal protein S4, X-linked (RPS4X)
             pseudogene, a small nuclear ribonucleoprotein polypeptide
             G pseudogene and a CpG island, complete sequence
          Length = 165987

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 260   gtccctgccctcatagggaggagg 283
             |||||||||||||| |||||||||
Sbjct: 54821 gtccctgccctcatggggaggagg 54844

>gb|AC020651.19| Homo sapiens 3 BAC RP11-49I4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152649

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   agtgttctctactggtagtt 247
             ||||||||||||||||||||
Sbjct: 34506 agtgttctctactggtagtt 34487

>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence
          Length = 148054

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    acctggctggccctggtagc 345
              ||||||||||||||||||||
Sbjct: 112522 acctggctggccctggtagc 112541

>ref|XM_939259.1| PREDICTED: Homo sapiens zinc finger protein 469 (ZNF469), mRNA
          Length = 12479

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 acctggctggccctggtagc 345
           ||||||||||||||||||||
Sbjct: 933 acctggctggccctggtagc 914

>ref|XM_040592.7| PREDICTED: Homo sapiens zinc finger protein 469 (ZNF469), mRNA
          Length = 11544

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 acctggctggccctggtagc 345
           ||||||||||||||||||||
Sbjct: 552 acctggctggccctggtagc 533

>gb|AC018902.8| Homo sapiens chromosome 15 clone RP11-327C2 map 15Q21.2, complete
             sequence
          Length = 157226

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   tagttctagttctcaaaacaccat 132
             ||||||||||| ||||||||||||
Sbjct: 50453 tagttctagttatcaaaacaccat 50430

>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence
          Length = 115368

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   acctggctggccctggtagc 345
             ||||||||||||||||||||
Sbjct: 89097 acctggctggccctggtagc 89116

>gb|AF060923.1|AF060923 Homo sapiens clone 016a03 My021 protein mRNA, complete cds
          Length = 1313

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gcctggtgcaccaccaccat 363
           ||||||||||||||||||||
Sbjct: 61  gcctggtgcaccaccaccat 80

>emb|CR548632.13| Zebrafish DNA sequence from clone DKEY-175H17 in linkage group 24,
             complete sequence
          Length = 178393

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    gatagtcagcagtgtattta 64
             ||||||||||||||||||||
Sbjct: 50919 gatagtcagcagtgtattta 50900

>gb|AC161883.6| Mus musculus BAC clone RP23-91K1 from chromosome 14, complete sequence
          Length = 206274

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    aaacaaataacaaagctctg 35
             ||||||||||||||||||||
Sbjct: 72833 aaacaaataacaaagctctg 72852

>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence
          Length = 170607

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    ggttacctggctggccctgg 341
              ||||||||||||||||||||
Sbjct: 143993 ggttacctggctggccctgg 144012


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,514,496
Number of Sequences: 3902068
Number of extensions: 4514496
Number of successful extensions: 81832
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81761
Number of HSP's gapped (non-prelim): 71
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)