>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb|
           chitinase-1) (TBC-1)
          Length = 314

 Score =  128 bits (322), Expect = 7e-30
 Identities = 62/134 (46%), Positives = 88/134 (65%), Gaps = 2/134 (1%)
 Frame = -3

Query: 482 LKSSGVIRFASIAPYGNADVQRYYQTLWAAHGTAIDYVNFQFYAYGASTTAAQYVSLFDE 303
           LK + V+ F SIAP+ +A VQ +YQ LW  +G  IDYVNFQFYAY A T+  Q++  F+E
Sbjct: 171 LKKNEVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEE 230

Query: 302 QIANYPGANILASFTTAATNTSVPVDTALSACRTLQERGKLYGIFVWAADHS--RNQGFK 129
           Q +NY G  +L SF+T ++    P +    AC  L+++GKL+GIFVW+AD S   N  F+
Sbjct: 231 QSSNYHGGKVLVSFSTDSSGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFR 290

Query: 128 YETQSQALLTDATA 87
           YE Q+Q++L    +
Sbjct: 291 YEMQAQSMLASVNS 304

>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)|
          Length = 275

 Score =  127 bits (320), Expect = 1e-29
 Identities = 62/129 (48%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
 Frame = -3

Query: 482 LKSSGVIRFASIAPYGNADVQRYYQTLWAAHGTAIDYVNFQFYAYGASTTAAQYVSLFDE 303
           LK +GV+ F SIAP+ +A VQ +YQ LW  +G  IDYVNFQFY Y +  +  Q++  F+ 
Sbjct: 145 LKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKYFEM 204

Query: 302 QIANYPGANILASFTTAATNTSVPVDTALSACRTLQERGKLYGIFVWAADHS--RNQGFK 129
           Q +NYPG  +L SF+T  +    P +    AC  L+++GKL+GIFVW+AD S   N  FK
Sbjct: 205 QRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSILKKQGKLHGIFVWSADDSLMSNDVFK 264

Query: 128 YETQSQALL 102
           YE Q+Q+LL
Sbjct: 265 YEMQAQSLL 273

>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)|
          Length = 542

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
 Frame = -3

Query: 392 HGTAIDYVNFQFYAYGASTTAAQY-VSLFDEQI-ANYPGANILASFT-----TAATNTSV 234
           +  + DYVN QFY    S T + +    +D       P  N+   FT     TAA +  V
Sbjct: 208 NSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVKIMFTVPGSSTAAGSGYV 267

Query: 233 PVDTALSACRTLQERGKLY-GIFVWAADHSRNQG 135
           P+ T  +   +L  +   Y G+ VW A  + N G
Sbjct: 268 PMSTLQTIVPSLASKYSSYGGVSVWDASQAWNNG 301

>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)|
          Length = 540

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
 Frame = -3

Query: 392 HGTAIDYVNFQFYAYGASTTAAQY-VSLFDEQI-ANYPGANILASFT-----TAATNTSV 234
           +  + DYVN QFY    S T + +    +D       P  N+   FT     TAA +  V
Sbjct: 208 NSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYV 267

Query: 233 PVDTALSACRTLQERGKLY-GIFVWAADHSRNQG 135
           P+ T  +   +L      Y G+ VW A  + N G
Sbjct: 268 PMSTLQTIVPSLASEYSSYGGVSVWDASQAWNNG 301

>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa|
            1-like protein 1)
          Length = 1859

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 18/151 (11%)
 Frame = +3

Query: 84   VSGGISQQGLRLCLVLESLVPGMVCSPDKDAVELAP------LLQSPASTKRGVDRHRGI 245
            VSG   ++   L  +L+S   G   S +++A+E+AP      L Q    T +G D  +G+
Sbjct: 1552 VSGAPVRKAFDLQQILQSKKGG---SSNREAMEVAPQRTGRMLSQEDLGTVQGADEKQGL 1608

Query: 246  GRRRGEAGQD------------VGSRVVGDLLVEEADVLRRGGASAVGVKLEVDIVYGCP 389
            G   GE G+             + +   G    EE +     G   +G   E   + G  
Sbjct: 1609 GVAEGEEGEGKQRLRAEEDPEILKTEGSGCCAPEEDEATEEDGEICIGTAQESQQLEGTE 1668

Query: 390  VRRPQRLVVALHVGVAVRRDGRESDHAAALE 482
            + +   L  +   G  +    R+  H+  ++
Sbjct: 1669 MGKEGTLPQSFRDGGTLEAPARQGTHSVEIQ 1699

>GUAA_LEIXX (Q6AD51) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 503

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
 Frame = +3

Query: 228 DRHRGIGRRRGEA----------GQDVGSRVVGDL------LVEEADVLRRGGASAVGVK 359
           D  R IGR  G            G  +G R+VGD+      L+ +AD + R   +A G+ 
Sbjct: 359 DEVRAIGRELGLPEVIVGRQPFPGPGLGIRIVGDVTRERLDLLRDADAIVRAELTAAGLD 418

Query: 360 LEVDIVYGCPVRRPQRLVVALHVGVAVRRDGRESDHAAAL 479
            E   ++ CPV     +++A    V V+ DGR   H   L
Sbjct: 419 SE---IWQCPV-----VLLADVRSVGVQGDGRTYGHPIVL 450

>GUAA_GEOSL (P60500) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 520

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
 Frame = +3

Query: 183 LAPLLQSPASTKRGVDRHRGIGR----RRGEAGQDVGSRVVGDLLVEEADVLRRGGASAV 350
           L PL +      R +    G+ R    R    G  +G R++G++  E AD+LRR  A   
Sbjct: 368 LEPLRELFKDEVRAIGEELGLPRQMVWRHPFPGPGLGVRILGEVKKEYADILRRADA--- 424

Query: 351 GVKLEVDIVYGCPVRRPQRLVVALHV-GVAVRRDGRESDHAAAL 479
            + +E     G   +  Q   V L V  V V  DGR  ++  AL
Sbjct: 425 -IYIEELYAAGHYDKISQAFAVFLPVKSVGVMGDGRTYEYVIAL 467

>COA1_POVBO (P24848) Coat protein VP1|
          Length = 365

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 20/99 (20%), Positives = 42/99 (42%)
 Frame = -3

Query: 422 QRYYQTLWAAHGTAIDYVNFQFYAYGASTTAAQYVSLFDEQIANYPGANILASFTTAATN 243
           +RY  +        I+ +N+ F+A G      Q++   ++  A Y     +       +N
Sbjct: 133 KRYSPSAGQGSAMPIEGINYHFFAVGGEPLEIQFIC--EDFKAPYHPTETIVPPKDKLSN 190

Query: 242 TSVPVDTALSACRTLQERGKLYGIFVWAADHSRNQGFKY 126
            S  +D  L   + + ++  +Y +  W  D S+N+  +Y
Sbjct: 191 KSQVLDPTL---KGILDKDGVYPVECWCPDPSKNENTRY 226

>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 915

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/46 (41%), Positives = 20/46 (43%)
 Frame = -3

Query: 344 ASTTAAQYVSLFDEQIANYPGANILASFTTAATNTSVPVDTALSAC 207
           A T A   V LF +  A  PG    AS    A  T  PV  AL AC
Sbjct: 425 AVTAATTEVDLFGDAFAASPGEAPAASEGATAPATPAPVAAALDAC 470

>GUAA_GEOMG (Q39TA7) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 520

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +3

Query: 267 GQDVGSRVVGDLLVEEADVLRRGGASAVGVKLEVDIVYGCPVRRPQRLVVALHV-GVAVR 443
           G  +G R++G++  E AD+LRR  A    + +E     G   +  Q   V L V  V V 
Sbjct: 400 GPGLGVRILGEVKKEYADILRRADA----IYIEELYAAGHYDKISQAFAVFLPVKSVGVM 455

Query: 444 RDGRESDHAAAL 479
            DGR  ++  AL
Sbjct: 456 GDGRTYEYVVAL 467

>VL2_HPV2A (P25487) Minor capsid protein L2|
          Length = 524

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +3

Query: 162 PDKDAVELAPLLQSPASTKRGVDRHRGIGRR---RGEAGQDVGSRV 290
           PD D +++  L +   +++RG  R   +GRR   R  +G+ +G+RV
Sbjct: 330 PDPDFLDIVALHRPALTSRRGTVRFSRLGRRATLRTRSGKQIGARV 375

>CKAP5_HUMAN (Q14008) Cytoskeleton-associated protein 5 (Colonic and hepatic|
           tumor over-expressed protein) (Ch-TOG protein)
          Length = 2032

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +3

Query: 198 QSPASTKRGVDRHRGIGRRRGEAGQ--DVGSRVVGDLL--VEEADVLRRGGASAVGVK 359
           QSP +  RG+ +H   G   GE G   D GS  V DLL   E +D +     S +G K
Sbjct: 815 QSPPAPTRGISKHSTSGTDEGEDGDEPDDGSNDVVDLLPRTEISDKITSELVSKIGDK 872

>AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 907

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 18/44 (40%), Positives = 19/44 (43%)
 Frame = -3

Query: 338 TTAAQYVSLFDEQIANYPGANILASFTTAATNTSVPVDTALSAC 207
           T     V LF +  A  PG    AS   AA  T  PV  AL AC
Sbjct: 431 TAVTAEVDLFGDAFAASPGEAPAASEGAAAPATPTPVAAALDAC 474

>GUAA_MYCLE (P46810) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 529

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
 Frame = +3

Query: 219 RGVDRHRGIGRRRGEAGQDVGSRVVGDLLVEEADVLRRGGASA------VGVKLEVDIVY 380
           R +D    I  R+   G  +G R+VG++  E  D LRR  + A       G+  +   ++
Sbjct: 392 RQLDLPEEIVARQPFPGPGLGIRIVGEVTAERLDTLRRADSIAREELTTAGLDYQ---IW 448

Query: 381 GCPVRRPQRLVVALHVGVAVRRDGRESDHAAAL 479
            CPV     +++A    V V+ D R   H   L
Sbjct: 449 QCPV-----VLLADVRSVGVQGDNRSYGHPIVL 476

>TDHA_HAEIN (P44523) TonB-dependent heme receptor A precursor|
          Length = 744

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 25/115 (21%), Positives = 45/115 (39%)
 Frame = -3

Query: 464 IRFASIAPYGNADVQRYYQTLWAAHGTAIDYVNFQFYAYGASTTAAQYVSLFDEQIANYP 285
           +R+  I   G  ++   Y  + A H  +    N   Y  G +     Y+SLF      + 
Sbjct: 434 VRYDHINNIGQKNLALKYNDISAGHDYSQKNYNGWSYYLGLNYDVNHYLSLFTNFSKTWR 493

Query: 284 GANILASFTTAATNTSVPVDTALSACRTLQERGKLYGIFVWAADHSRNQGFKYET 120
              I   + T    +SVP  T+L+  + +  + ++ GI         N  F++ T
Sbjct: 494 APVIDEQYETQFKQSSVPA-TSLNLEKEMINQTRVGGIITLNHLFQENDAFQFRT 547

>GUAA_CORAM (O52831) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 524

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
 Frame = +3

Query: 162 PDKDAVELA-PLLQSPASTKRGVDRHRGIGR----RRGEAGQDVGSRVVGDLLVEEADVL 326
           PD    EL  PL        R V R  G+      R+   G  +G R++G++  E  ++L
Sbjct: 363 PDDVEFELVEPLRLLFKDEVRAVGRELGLPEEIVARQPFPGPGLGIRIIGEVTEERLEIL 422

Query: 327 RRGGASA----VGVKLEVDIVYGCPVRRPQRLVVALHVGVAVRRDGRESDHAAAL 479
           R+    A        L+ DI + CPV     +++A    V V+ DGR   H   L
Sbjct: 423 RQADLIARTELTNAGLDGDI-WQCPV-----VLLADVRSVGVQGDGRTYGHPIVL 471

>HTS_DROME (Q02645) Protein hu-li tai shao (Adducin-like protein)|
          Length = 1156

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +3

Query: 252 RRGEAGQDVGSRVVGDLLVEEADVLRRGGASAVGVKLEVDIVYGCPVRR 398
           RR      +GS++  + L    D  R GGA A G+  ++  + G PV R
Sbjct: 39  RRKRVEAIMGSKLFREELERIVDSARDGGAGASGILQQLSDIVGVPVSR 87

>GUAA_PELCD (Q3A590) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 520

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +3

Query: 267 GQDVGSRVVGDLLVEEADVLRRGGASAVGVKLEVDIVYGCPVRRPQRLVVALHV-GVAVR 443
           G  +G R++G++  E AD+LRR  A    + +E     G   +  Q   V L V  V V 
Sbjct: 400 GPGLGVRILGEVKPEYADILRRADA----IYIEELYRTGHYDKISQAFAVFLPVKSVGVM 455

Query: 444 RDGRESDHAAAL 479
            DGR  ++  AL
Sbjct: 456 GDGRTYEYVIAL 467

>VL2_HPV27 (P36755) Minor capsid protein L2|
          Length = 464

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +3

Query: 162 PDKDAVELAPLLQSPASTKRGVDRHRGIGRR---RGEAGQDVGSRV 290
           PD D +++  L +   ++++G  R   +GRR   R  +G+ +G+RV
Sbjct: 273 PDPDFLDIVALHRPALTSRQGTVRFSRLGRRATLRTRSGKQIGARV 318

>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein) (Phosphoprotein F1-20)
          Length = 901

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/46 (39%), Positives = 19/46 (41%)
 Frame = -3

Query: 344 ASTTAAQYVSLFDEQIANYPGANILASFTTAATNTSVPVDTALSAC 207
           A T     V LF +  A  PG    AS    A  T  PV  AL AC
Sbjct: 425 AVTAVTTEVDLFGDAFAASPGEAPAASEGATAPATPAPVAAALDAC 470

>ENGA_XYLFA (Q9PG37) GTP-binding protein engA|
          Length = 465

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 22/85 (25%), Positives = 40/85 (47%)
 Frame = +3

Query: 105 QGLRLCLVLESLVPGMVCSPDKDAVELAPLLQSPASTKRGVDRHRGIGRRRGEAGQDVGS 284
           Q +  C V   L+       D+DA  LA +L +  +    +++  G+G  + E  +D+ S
Sbjct: 256 QVIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVVAMNKWDGLGTYQREQAEDLLS 315

Query: 285 RVVGDLLVEEADVLRRGGASAVGVK 359
           R +G   V  A+V+R       G++
Sbjct: 316 RKLG--FVNWAEVVRLSAKHGSGLR 338


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,625,882
Number of Sequences: 219361
Number of extensions: 1157144
Number of successful extensions: 3039
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3039
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)