>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)|
           (Nepenthesin-II)
          Length = 438

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
 Frame = -3

Query: 473 SVRNLDTCYDF-TRFPEVKVPKVSLVFAGGATLDLEPASIILDG-----CLAFAATPGEE 312
           S   L TC+   +    V+VP++S+ F GG  L+L   +I++       CLA  ++  + 
Sbjct: 347 SSSGLSTCFQQPSDGSTVQVPEISMQFDGGV-LNLGEQNILISPAEGVICLAMGSS-SQL 404

Query: 311 SVGFIGNVQQQTYEVLYDVGGGKVGFRRGAC 219
            +   GN+QQQ  +VLYD+    V F    C
Sbjct: 405 GISIFGNIQQQETQVLYDLQNLAVSFVPTQC 435

>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)|
           (Nepenthesin-I)
          Length = 437

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
 Frame = -3

Query: 473 SVRNLDTCYDFTRFPE-VKVPKVSLVFAGGATLDLEPASIIL---DGCLAFAATPGEESV 306
           S    D C+     P  +++P   + F GG  L+L   +  +   +G +  A     + +
Sbjct: 347 SSSGFDLCFQTPSDPSNLQIPTFVMHFDGG-DLELPSENYFISPSNGLICLAMGSSSQGM 405

Query: 305 GFIGNVQQQTYEVLYDVGGGKVGFRRGAC 219
              GN+QQQ   V+YD G   V F    C
Sbjct: 406 SIFGNIQQQNMLVVYDTGNSVVSFASAQC 434

>ASPP_AEDAE (Q03168) Lysosomal aspartic protease precursor (EC 3.4.23.-)|
          Length = 387

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
 Frame = -3

Query: 422 KVPKVSLVFAGGATLDLEPA-----------SIILDGCLAFAATPGEESVGFIGNVQQQT 276
           K+PK+S V  GG + DLE A           +I L G +     P    +  +G+V    
Sbjct: 311 KLPKISFVL-GGKSFDLEGADYVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGK 369

Query: 275 YEVLYDVGGGKVGF 234
           Y   +D+G  +VGF
Sbjct: 370 YYTEFDMGNDRVGF 383

>PEPC_CAVPO (Q64411) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 394

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
 Frame = -3

Query: 419 VPKVSLVFAGGATLDLEPASIILDG---CLA-----FAATPGEESVGFIGNVQQQTYEVL 264
           +P ++ V +G     L P++ IL G   C+      + +  G E V  +G+V  ++Y  +
Sbjct: 322 LPTLTFVISG-VEFPLSPSAYILSGENYCMVGLESTYVSPGGGEPVWILGDVFLRSYYSV 380

Query: 263 YDVGGGKVGFRRGA 222
           YD+   +VGF   A
Sbjct: 381 YDLANNRVGFATAA 394

>SYF1_YEAST (Q04048) Pre-mRNA-splicing factor SYF1 (Synthetic lethal with CDC40|
           protein 1) (PRP19-associated complex protein 90)
          Length = 859

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +2

Query: 257 RRTELRKSAAARCR*TRRILHRGWPR---TPGSHPKLWKPVRDPRWRHQRI 400
           +R  L+KSAA +C      + +  PR   TPGS  +LW    D  WR   I
Sbjct: 413 KRVSLQKSAAEKCNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNAI 463

>HAIR_HUMAN (O43593) Protein hairless|
          Length = 1189

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
 Frame = +1

Query: 151 ACIPQ-IHTIGPSHDWLSC---NLPHQHAPRRNPTLPPPTSYRTS*VCCCTLPMNPT--- 309
           AC P  +HT+G  + W      NL +Q  P   P  P P    T   CC + P  PT   
Sbjct: 281 ACPPGLVHTLG--NVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYP--PTKGG 336

Query: 310 DSSP---------GVAANARQPSKIMEAGSRSKVAPPAN 399
           D  P         G A+ A +PS+ +   S  +  PP++
Sbjct: 337 DLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSH 375

>COBT_RHIME (Q92P98) Nicotinate-nucleotide--dimethylbenzimidazole|
           phosphoribosyltransferase (EC 2.4.2.21) (NN:DBI PRT)
           (N(1)-alpha-phosphoribosyltransferase)
          Length = 338

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -1

Query: 394 LVAPPWISNRLP*--FWMAAWRSRPPPVKNP 308
           L  PP    RL    FW+AAW  RPP V  P
Sbjct: 36  LTKPPGALGRLEEIAFWLAAWTGRPPAVNRP 66

>CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protein fettucine)|
          Length = 1403

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +1

Query: 214  HQHAPRRNPTLPPPTSYRTS*VCCCTLPMNPTDSSPGVAANARQPSKIMEAGSRSKVA 387
            H ++   +  LP PTS  T+      LP+ PT SS     N +QP   M+    S  A
Sbjct: 1116 HVNSSNLSSALPTPTSSTTTPNSDEQLPLTPTTSSSNSNLNQQQPKSPMKGAPGSTAA 1173

>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/68 (25%), Positives = 27/68 (39%)
 Frame = +1

Query: 226  PRRNPTLPPPTSYRTS*VCCCTLPMNPTDSSPGVAANARQPSKIMEAGSRSKVAPPANTR 405
            P    T PPPT+  +  +   T P+  T  SP ++     P     +   +  +PP  T 
Sbjct: 1425 PTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTP 1484

Query: 406  ETFGTLTS 429
                T T+
Sbjct: 1485 SPPTTTTT 1492

>LIMD1_HUMAN (Q9UGP4) LIM domains-containing protein 1|
          Length = 676

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 323 GWPRTPGSHPKLWKPVRDPRWRHQRI 400
           GWP +PGS P L KP  D    H+++
Sbjct: 207 GWPSSPGSDPPLPKPCGDHPLNHRQL 232

>H1_CHICK (P09987) Histone H1|
          Length = 217

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +1

Query: 304 PTDSSPGVAANARQPSKIMEAGSRSKVAPPANTRETFGTLTSGKRVKS*HVSRLRTEAAS 483
           P  S+PG  A A++P K        K A P+ T      +++ K  K   ++ L+   A+
Sbjct: 9   PAVSAPGAKAAAKKPKKAAGGAKPRKPAGPSVTELITKAVSASKERKGLSLAALKKALAA 68

Query: 484 GPY 492
           G Y
Sbjct: 69  GGY 71

>ASPRX_ORYSA (P42211) Aspartic proteinase precursor (EC 3.4.23.-)|
          Length = 496

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -3

Query: 362 SIILDGCLAFAATPGEESVGFIGNVQQQTYEVLYDVGGGKVGFRRGA 222
           ++ + G +AF   P    +  +G+V    Y  ++D G  ++GF + A
Sbjct: 450 TVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA 496

>RCOR2_XENLA (Q6NRZ0) REST corepressor 2|
          Length = 503

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 21/62 (33%), Positives = 26/62 (41%)
 Frame = +1

Query: 211 PHQHAPRRNPTLPPPTSYRTS*VCCCTLPMNPTDSSPGVAANARQPSKIMEAGSRSKVAP 390
           P   A   + +LPPP   R +  C  TL   P    PG     R P  +  A  +S  AP
Sbjct: 432 PPAAAAAASLSLPPPL-LRPAIPCAPTLHRQPPPLQPGRLLQPRPPPLVRPAPRQSPRAP 490

Query: 391 PA 396
           PA
Sbjct: 491 PA 492

>TBX2_HUMAN (Q13207) T-box transcription factor TBX2 (T-box protein 2)|
          Length = 702

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
 Frame = +1

Query: 241 TLPPPTSYRTS*VCCCTLPMNPTDSSPGVAANARQPSKIME-------AGSRSKVAPPAN 399
           T+PP TS  T+ +         ++ S     N+R+PS + E       A SR  ++P  +
Sbjct: 619 TIPPSTSLLTTGLA--------SEGSKAAGGNSREPSPLPELALRKVGAPSRGALSPSGS 670

Query: 400 TRETFGTLTSGKRVKS*HVSRLRTEAASGP 489
            +E    L S +R+    VS L ++ A  P
Sbjct: 671 AKEAANELQSIQRL----VSGLESQRALSP 696

>SNPH_HUMAN (O15079) Syntaphilin|
          Length = 538

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 295 PMNPTDSSPGVAANARQPSKIMEAGSRSKVAPPANTRETFGT 420
           P+ P   +  + A +   S+   AGSR + +PP + R+ +GT
Sbjct: 34  PIPPLTRTHSLMAMSLPGSRRTSAGSRRRTSPPVSVRDAYGT 75

>PEPC_CALJA (Q9N2D3) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 388

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = -3

Query: 473 SVRNLDTCYDFTRFPEVKVPKVSLVFA--GGATLDLEPASIILDGCLAFAATPGEESVGF 300
           S++NL T        E  +P  S + +  G  T+ +EP          + ++   + +  
Sbjct: 312 SIQNLPTLTFIINGVEFPLPPSSYILSNNGYCTVGVEPT---------YLSSQNSQPLWI 362

Query: 299 IGNVQQQTYEVLYDVGGGKVGFRRGA 222
           +G+V  ++Y  ++D+G  +VGF   A
Sbjct: 363 LGDVFLRSYYSVFDLGNNRVGFATAA 388

>TBX2_CANFA (Q863A2) T-box transcription factor TBX2 (T-box protein 2)|
          Length = 702

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
 Frame = +1

Query: 241 TLPPPTSYRTS*VCCCTLPMNPTDSSPGVAANARQPSKIME-------AGSRSKVAPPAN 399
           T+PP TS  T+ +          + S    +N+R+PS + E       A SR  ++P  +
Sbjct: 619 TIPPSTSLLTTGLAA--------EGSKAAGSNSREPSPLPELALRKVGAPSRGALSPSGS 670

Query: 400 TRETFGTLTSGKRVKS*HVSRLRTEAASGP 489
            +E    L S +R+    VS L  + A  P
Sbjct: 671 AKEAASELQSIQRL----VSGLENQRALSP 696

>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)|
           (CDP)
          Length = 1505

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 289 TLPMNPTDSSPGVAANARQPSKIMEAGSRSKVAPPANTRE 408
           T PM    S P +A + ++PS   EAG+ +   PPA  +E
Sbjct: 748 TSPMPTVSSYPPLAISLKKPSAAPEAGASALPNPPALKKE 787

>ARGB_SYNEL (P59303) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 295

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -3

Query: 350 DGCLAFAATPGEESVGFIGNVQ 285
           DG L  A   GEES+GF+G VQ
Sbjct: 126 DGNLIRARAKGEESIGFVGEVQ 147

>PEPC_HUMAN (P20142) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 388

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = -3

Query: 473 SVRNLDTCYDFTRFPEVKVPKVSLVFA--GGATLDLEPASIILDGCLAFAATPGEESVGF 300
           S++NL +        E  +P  S + +  G  T+ +EP          + ++   + +  
Sbjct: 312 SIQNLPSLTFIINGVEFPLPPSSYILSNNGYCTVGVEPT---------YLSSQNGQPLWI 362

Query: 299 IGNVQQQTYEVLYDVGGGKVGFRRGA 222
           +G+V  ++Y  +YD+G  +VGF   A
Sbjct: 363 LGDVFLRSYYSVYDLGNNRVGFATAA 388

>CU030_HUMAN (Q9UFM2) Putative protein C21orf30|
          Length = 244

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
 Frame = -1

Query: 340 WRSRP-----PPVKNPSG--SSATCSSRLTKFCTTSAVARWDSVVERADVAGCRT 197
           WRS P     P  ++P+    S  CS  ++  CT    ARWD+  + A +  C T
Sbjct: 108 WRSTPEMTSLPAPEHPASPCDSVLCSPDVS-MCTLGPAARWDAQAKSAPLPPCCT 161

>H1_ANAPL (P09426) Histone H1|
          Length = 217

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +1

Query: 304 PTDSSPGVAANARQPSKIMEAGSRSKVAPPANTRETFGTLTSGKRVKS*HVSRLRTEAAS 483
           P  S+PG  A  ++P K        K A P+ T      + + K  K   ++ L+   A+
Sbjct: 9   PAVSAPGAKAAGKKPKKAAGGSKARKPAGPSVTELITKAVAASKERKGLSLAALKKALAA 68

Query: 484 GPY 492
           G Y
Sbjct: 69  GGY 71

>PEPC_SORUN (Q9GMY4) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 389

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -3

Query: 392 GGATLDLEPASIILDGCLAFAATPGEESVGFIGNVQQQTYEVLYDVGGGKVGFRRGA 222
           G  TL +EP          +  +P  + +  +G+V  ++Y  +YD+G  +VGF   A
Sbjct: 342 GYCTLGVEPT---------YLPSPTGQPLWILGDVFLRSYYSVYDMGNNRVGFATAA 389

>H101_CHICK (P08284) Histone H1.01|
          Length = 218

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +1

Query: 304 PTDSSPGVAANARQPSKIMEAGSRSKVAPPANTRETFGTLTSGKRVKS*HVSRLRTEAAS 483
           P   +PG  A A++P K        K A P+ T      +++ K  K   ++ L+   A+
Sbjct: 9   PDAPAPGAKAAAKKPKKAAGGAKARKPAGPSVTELITKAVSASKERKGLSLAALKKALAA 68

Query: 484 GPY 492
           G Y
Sbjct: 69  GGY 71

>BWR1B_HUMAN (Q8N1D0) Beckwith-Wiedemann syndrome chromosome region 1 candidate|
           protein B (p27-Beckwith-Wiedemann region 1 B)
           (p27-BWR1B) (Organic cation transporter-like protein
           2-antisense) (Solute carrier family 22 member 18
           antisense) (Solute carrier
          Length = 253

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -2

Query: 513 LQKRHGSIWPTGGLRPQPRHMLRLHPLP*GQGPKGFSRIRWWRHLGSRTGFHNFG 349
           LQ++   +W +  +RPQP+ + R       +  + F R+R  R  G R GF + G
Sbjct: 34  LQRKRLWLWASEPVRPQPQGIHRFR-----EARRQFCRMRGSRLTGGRKGFGSSG 83

>YKC2_CAEEL (P41993) Hypothetical protein B0280.2|
          Length = 627

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +1

Query: 181 PSHDWLSCNLPHQHAPRRNPTLPPPTSYRTS*VCCCTLPMNPTDSSPGVAAN---ARQPS 351
           P+H   S   P   AP R P  P P    ++ +C       PT S+P    N   A  P+
Sbjct: 386 PNHTHCS-EKPIAEAPLRPPVRPAPIVPTSAGLCLVLAASFPTSSTPSRFLNPFPAPLPA 444

Query: 352 KIMEAGSRSKVA 387
           +     S+SK+A
Sbjct: 445 ESFFGNSKSKIA 456


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,693,845
Number of Sequences: 219361
Number of extensions: 1796467
Number of successful extensions: 5791
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5790
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)