ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
2dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
3dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
4ref|NM_192718.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
6dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
7ref|XM_506943.1| PREDICTED Oryza sativa (japonica cultivar-group... 52 0.002
8ref|XM_467513.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
9ref|XM_506944.1| PREDICTED Oryza sativa (japonica cultivar-group... 52 0.002
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
12dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
13dbj|AK105989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
14dbj|AK101967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
15dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
16ref|XM_550548.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.44
17dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
18dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
19emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 44 0.44
20dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
21gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
22dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
23dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
24dbj|AK108029.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
25dbj|AK105666.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
26ref|XM_482871.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
27gb|AC149375.2| Phakopsora pachyrhizi clone JGIAFNA-5A12, complet... 40 6.9
28gb|AY534675.1| Anolis ernestwilliamsi cytochrome b (cytb) gene, ... 40 6.9
29gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome ... 40 6.9
30gb|DQ026190.1| Cephaloleia cf. erichsonii 028 voucher 028 cytoch... 40 6.9
31gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosom... 40 6.9
32gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosom... 40 6.9
33emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in... 40 6.9
34gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, compl... 40 6.9
35emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in ... 40 6.9
36gb|AC117383.4| Homo sapiens 3 BAC RP11-789L4 (Roswell Park Cance... 40 6.9
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
38gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome... 40 6.9
39dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
40dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
41dbj|AK108789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
42emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-8... 40 6.9
43gb|AF016585.1|AF016585 Streptomyces caelestis cytochrome P-450 h... 40 6.9
44emb|CT009715.15| Mouse DNA sequence from clone RP23-85E24 on chr... 40 6.9
45emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chr... 40 6.9 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                         
Query: 250     ccgccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatgaacccga 307
               |||||||||||||| || || ||||  ||||||||||||||||| |||||||| ||||
Sbjct: 1154095 ccgccgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccga 1154038



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                     
Query: 254     cgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatgaacccga 307
               |||||||||| || || ||||  ||||||||||||||||| |||||||| ||||
Sbjct: 1137545 cgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccga 1137492



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 277     gtctgctgctgcacgttgccgatgaa 302
               |||| |||||||||||||||||||||
Sbjct: 1062952 gtcttctgctgcacgttgccgatgaa 1062977



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 438     ggtgaagtcgtagcatgtgtcgagg 462
               ||||||||||||||| |||||||||
Sbjct: 1063113 ggtgaagtcgtagcaggtgtcgagg 1063137



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 438     ggtgaagtcgtagcatgtgtcgagg 462
               ||||||||||||||| |||||||||
Sbjct: 1061852 ggtgaagtcgtagcacgtgtcgagg 1061876



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 281     gctgctgcacgttgccgatgaaccc 305
               ||||||| |||||||||||||||||
Sbjct: 1061695 gctgctgaacgttgccgatgaaccc 1061719



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 438      ggtgaagtcgtagcatgtgtcgag 461
                ||||||||||||||| ||||||||
Sbjct: 11426964 ggtgaagtcgtagcacgtgtcgag 11426941
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>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0660D08
          Length = 146915

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                        
Query: 250    ccgccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatgaacccga 307
              |||||||||||||| || || ||||  ||||||||||||||||| |||||||| ||||
Sbjct: 130318 ccgccgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccga 130261



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                    
Query: 254    cgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatgaacccga 307
              |||||||||| || || ||||  ||||||||||||||||| |||||||| ||||
Sbjct: 113768 cgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccga 113715



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 277   gtctgctgctgcacgttgccgatgaa 302
             |||| |||||||||||||||||||||
Sbjct: 39175 gtcttctgctgcacgttgccgatgaa 39200



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 438   ggtgaagtcgtagcatgtgtcgagg 462
             ||||||||||||||| |||||||||
Sbjct: 39336 ggtgaagtcgtagcaggtgtcgagg 39360



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 438   ggtgaagtcgtagcatgtgtcgagg 462
             ||||||||||||||| |||||||||
Sbjct: 38075 ggtgaagtcgtagcacgtgtcgagg 38099



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 281   gctgctgcacgttgccgatgaaccc 305
             ||||||| |||||||||||||||||
Sbjct: 37918 gctgctgaacgttgccgatgaaccc 37942
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>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0542E10
          Length = 146196

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 250  ccgccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatgaacccga 307
            |||||||||||||| || || ||||  ||||||||||||||||| |||||||| ||||
Sbjct: 6048 ccgccgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccga 5991
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>ref|NM_192718.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1413

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 250  ccgccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatg 300
            ||||||||||||||||| || ||| | ||  ||||||||||||||||||||
Sbjct: 1379 ccgccgacgtcgtacaggacctcgaacgtgcgctgctgcacgttgccgatg 1329
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 250      ccgccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatg 300
                ||||||||||||||||| || ||| | ||  ||||||||||||||||||||
Sbjct: 24016018 ccgccgacgtcgtacaggacctcgaacgtgcgctgctgcacgttgccgatg 24015968
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>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0090K04
          Length = 152556

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 250    ccgccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatg 300
              ||||||||||||||||| || ||| | ||  ||||||||||||||||||||
Sbjct: 130540 ccgccgacgtcgtacaggacctcgaacgtgcgctgctgcacgttgccgatg 130490
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>ref|XM_506943.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19
           mRNA
          Length = 1716

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 252 gccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatga 301
           ||||||||||||||| || ||| | ||| ||||||||||||| |||||||
Sbjct: 321 gccgacgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatga 370
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>ref|XM_467513.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1716

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 252  gccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatga 301
            ||||||||||||||| || ||| | ||| ||||||||||||| |||||||
Sbjct: 1396 gccgacgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatga 1347
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>ref|XM_506944.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19 mRNA
          Length = 1737

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 252  gccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatga 301
            ||||||||||||||| || ||| | ||| ||||||||||||| |||||||
Sbjct: 1402 gccgacgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatga 1353
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 252      gccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatga 301
                ||||||||||||||| || ||| | ||| ||||||||||||| |||||||
Sbjct: 29911316 gccgacgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatga 29911365
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>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0654B04
          Length = 156907

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 252   gccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatga 301
             ||||||||||||||| || ||| | ||| ||||||||||||| |||||||
Sbjct: 11592 gccgacgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatga 11641
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>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_D06
          Length = 112768

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 252   gccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatga 301
             ||||||||||||||| || ||| | ||| ||||||||||||| |||||||
Sbjct: 68281 gccgacgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatga 68330
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>dbj|AK105989.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G11, full
            insert sequence
          Length = 1716

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 252  gccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatga 301
            ||||||||||||||| || ||| | ||| ||||||||||||| |||||||
Sbjct: 1396 gccgacgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatga 1347
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>dbj|AK101967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076I21, full
            insert sequence
          Length = 1736

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 252  gccgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatga 301
            ||||||||||||||| || ||| | ||| ||||||||||||| |||||||
Sbjct: 1401 gccgacgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatga 1352
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>dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E01, full
            insert sequence
          Length = 1389

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                  
Query: 254  cgacgtcgtacagaacttcgtaagtctgctgctgcacgttgccgatgaacccga 307
            |||||||||| || || ||||  ||||||||||||||||| |||||||| ||||
Sbjct: 1304 cgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccga 1251
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>ref|XM_550548.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1886

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 277  gtctgctgctgcacgttgccgatgaa 302
            |||| |||||||||||||||||||||
Sbjct: 1498 gtcttctgctgcacgttgccgatgaa 1473



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 438  ggtgaagtcgtagcatgtgtcgagg 462
            ||||||||||||||| |||||||||
Sbjct: 1337 ggtgaagtcgtagcaggtgtcgagg 1313
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>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062J13
          Length = 152837

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 277    gtctgctgctgcacgttgccgatgaa 302
              |||| |||||||||||||||||||||
Sbjct: 125825 gtcttctgctgcacgttgccgatgaa 125850



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 438    ggtgaagtcgtagcatgtgtcgagg 462
              ||||||||||||||| |||||||||
Sbjct: 125986 ggtgaagtcgtagcaggtgtcgagg 126010



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 438    ggtgaagtcgtagcatgtgtcgagg 462
              ||||||||||||||| |||||||||
Sbjct: 124725 ggtgaagtcgtagcacgtgtcgagg 124749



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 281    gctgctgcacgttgccgatgaaccc 305
              ||||||| |||||||||||||||||
Sbjct: 124568 gctgctgaacgttgccgatgaaccc 124592
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>dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C01, full
            insert sequence
          Length = 1886

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 277  gtctgctgctgcacgttgccgatgaa 302
            |||| |||||||||||||||||||||
Sbjct: 1498 gtcttctgctgcacgttgccgatgaa 1473



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 438  ggtgaagtcgtagcatgtgtcgagg 462
            ||||||||||||||| |||||||||
Sbjct: 1337 ggtgaagtcgtagcaggtgtcgagg 1313
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 316     tcaccgggggtggccgcgaacgccag 341
               ||||||| ||||||||||||||||||
Sbjct: 2348786 tcaccggcggtggccgcgaacgccag 2348811
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>dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G18, full
            insert sequence
          Length = 1900

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 277  gtctgctgctgcacgttgccgatgaa 302
            |||| |||||||||||||||||||||
Sbjct: 1490 gtcttctgctgcacgttgccgatgaa 1465



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 438  ggtgaagtcgtagcatgtgtcgagg 462
            ||||||||||||||| |||||||||
Sbjct: 1329 ggtgaagtcgtagcaggtgtcgagg 1305
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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
            OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 438  ggtgaagtcgtagcatgtgtcgagg 462
            ||||||||||||||| |||||||||
Sbjct: 8414 ggtgaagtcgtagcacgtgtcgagg 8390
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 438      ggtgaagtcgtagcatgtgtcgagg 462
                ||||||||||||||| |||||||||
Sbjct: 18480408 ggtgaagtcgtagcacgtgtcgagg 18480384



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 438      ggtgaagtcgtagcatgtgtcgagg 462
                ||||||||||||||| |||||||||
Sbjct: 18468949 ggtgaagtcgtagcacgtgtcgagg 18468925
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>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0463D04
          Length = 145828

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 438    ggtgaagtcgtagcatgtgtcgagg 462
              ||||||||||||||| |||||||||
Sbjct: 142282 ggtgaagtcgtagcacgtgtcgagg 142258



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 438    ggtgaagtcgtagcatgtgtcgagg 462
              ||||||||||||||| |||||||||
Sbjct: 130823 ggtgaagtcgtagcacgtgtcgagg 130799
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>dbj|AK108029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-B01, full
           insert sequence
          Length = 1723

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 438 ggtgaagtcgtagcatgtgtcgagg 462
           ||||||||||||||| |||||||||
Sbjct: 636 ggtgaagtcgtagcacgtgtcgagg 660
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>dbj|AK105666.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H10, full
            insert sequence
          Length = 1608

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 438  ggtgaagtcgtagcatgtgtcgagg 462
            ||||||||||||||| |||||||||
Sbjct: 1305 ggtgaagtcgtagcacgtgtcgagg 1281
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>ref|XM_482871.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1298

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 278  tctgctgctgcacgttgccgatga 301
            |||||||||| |||||||||||||
Sbjct: 1053 tctgctgctggacgttgccgatga 1030
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>gb|AC149375.2| Phakopsora pachyrhizi clone JGIAFNA-5A12, complete sequence
          Length = 34839

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   tcttcttcttccatttattt 120
             ||||||||||||||||||||
Sbjct: 19587 tcttcttcttccatttattt 19568
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>gb|AY534675.1| Anolis ernestwilliamsi cytochrome b (cytb) gene, partial cds;
           mitochondrial
          Length = 642

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 92  cgcattacatcttcttcttccatttatt 119
           |||||| ||| |||||||||||||||||
Sbjct: 441 cgcattccattttcttcttccatttatt 468
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>gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome 7, complete sequence
          Length = 218291

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  tcttcttcttccatttattt 120
            ||||||||||||||||||||
Sbjct: 4684 tcttcttcttccatttattt 4703
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>gb|DQ026190.1| Cephaloleia cf. erichsonii 028 voucher 028 cytochrome b (cytb)
           gene, partial cds; mitochondrial
          Length = 449

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  ttacatcttcttcttccatttatt 119
           |||||| |||||||||||||||||
Sbjct: 136 ttacattttcttcttccatttatt 159
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>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete
             sequence
          Length = 199956

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   tcttcttcttccatttatttataa 124
             ||||||||||| ||||||||||||
Sbjct: 21654 tcttcttcttcaatttatttataa 21677
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>gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosome 7, complete sequence
          Length = 163841

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tcttcttcttccatttattt 120
             ||||||||||||||||||||
Sbjct: 84087 tcttcttcttccatttattt 84106
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>emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in linkage group 8,
             complete sequence
          Length = 173122

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     acagtaataattatataagctgac 24
             ||||||||||||||| ||||||||
Sbjct: 69322 acagtaataattataaaagctgac 69345
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>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence
          Length = 188819

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 101    tcttcttcttccatttatttataa 124
              ||||||||||| ||||||||||||
Sbjct: 131554 tcttcttcttcaatttatttataa 131577
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>emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in linkage group 20
             Contains the gene for a novel protein similar to mouse and
             human integrin beta 1 binding protein 1 (ITGB1BP1), the
             gene for a novel protein similar to vertebrate development
             and differentiation enhancing factor 2 (DDEF2) and three
             CpG islands, complete sequence
          Length = 209698

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   tcttcttcttccatttattt 120
             ||||||||||||||||||||
Sbjct: 25094 tcttcttcttccatttattt 25075
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>gb|AC117383.4| Homo sapiens 3 BAC RP11-789L4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194991

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     catcttcttcttccatttatttat 122
              ||||||||||||| ||||||||||
Sbjct: 188114 catcttcttcttctatttatttat 188137
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 278      tctgctgctgcacgttgccgatga 301
                |||||||||| |||||||||||||
Sbjct: 23063114 tctgctgctggacgttgccgatga 23063091
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>gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome 17, complete sequence
          Length = 224908

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    catcttcttcttccatttatttat 122
             ||||||||||||| ||||||||||
Sbjct: 89538 catcttcttcttctatttatttat 89561
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>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1386G10
          Length = 121827

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 438    ggtgaagtcgtagcatgtgtcgag 461
              ||||||||||||||| ||||||||
Sbjct: 114673 ggtgaagtcgtagcacgtgtcgag 114650
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>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 278    tctgctgctgcacgttgccgatga 301
              |||||||||| |||||||||||||
Sbjct: 122842 tctgctgctggacgttgccgatga 122819
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>dbj|AK108789.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-B04, full
            insert sequence
          Length = 1298

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 278  tctgctgctgcacgttgccgatga 301
            |||||||||| |||||||||||||
Sbjct: 1053 tctgctgctggacgttgccgatga 1030
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>emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-802A16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169936

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ttcttcttccatttatttat 122
             ||||||||||||||||||||
Sbjct: 64627 ttcttcttccatttatttat 64646
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>gb|AF016585.1|AF016585 Streptomyces caelestis cytochrome P-450 hydroxylase homolog (nidi)
             gene, partial cds; polyketide synthase modules 1 through 7
             (nidA) genes, complete cds; and N-methyltransferase
             homolog gene, partial cds
          Length = 41097

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   ctgctgctgcacgttgccga 298
             ||||||||||||||||||||
Sbjct: 10830 ctgctgctgcacgttgccga 10849
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>emb|CT009715.15| Mouse DNA sequence from clone RP23-85E24 on chromosome 17, complete
              sequence
          Length = 178948

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     catcttcttcttccatttatttat 122
              ||||||||||||| ||||||||||
Sbjct: 164247 catcttcttcttctatttatttat 164270
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>emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chromosome 11, complete
              sequence
          Length = 224034

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     catcttcttcttccatttatttat 122
              ||||||||| ||||||||||||||
Sbjct: 221099 catcttctttttccatttatttat 221122


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,724,787
Number of Sequences: 3902068
Number of extensions: 4724787
Number of successful extensions: 81506
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81177
Number of HSP's gapped (non-prelim): 329
length of query: 514
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 491
effective length of database: 17,143,297,704
effective search space: 8417359172664
effective search space used: 8417359172664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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