Clone Information

BLAST Search Result

Clone Name	rbart41a03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	234	2e-58
2	gb\|AC145480.2\| Genomic sequence for Oryza sativa, Nipponbare str...	234	2e-58
3	gb\|AC116426.1\| Genomic sequence for Oryza sativa, Nipponbare str...	234	2e-58
4	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	234	2e-58
5	gb\|AF453838.1\| Zea mays satase isoform II mRNA, complete cds	174	2e-40
6	gb\|AC125471.3\| Oryza sativa (japonica cultivar-group) chromosome...	151	2e-33
7	gb\|AF453837.1\| Zea mays satase isoform I mRNA, complete cds	68	3e-08
8	gb\|AY108366.1\| Zea mays PCO145512 mRNA sequence	68	3e-08
9	ref\|XM_464531.1\| Oryza sativa (japonica cultivar-group), mRNA	64	4e-07
10	dbj\|AP007255.1\| Magnetospirillum magneticum AMB-1 DNA, complete ...	64	4e-07
11	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	64	4e-07
12	dbj\|AP004045.3\| Oryza sativa (japonica cultivar-group) genomic D...	64	4e-07
13	gb\|CP000230.1\| Rhodospirillum rubrum ATCC 11170, complete genome	54	4e-04
14	ref\|NM_191801.1\| Oryza sativa (japonica cultivar-group), predic...	46	0.098
15	gb\|AY100470.1\| Oryza sativa (indica cultivar-group) putative sol...	46	0.098
16	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.098
17	dbj\|AP003292.2\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.098
18	dbj\|BA000012.4\| Mesorhizobium loti MAFF303099 DNA, complete genome	46	0.098
19	dbj\|AK102935.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.098
20	dbj\|AK102699.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.098
21	dbj\|AK071186.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.098
22	emb\|AL590814.5\| Human DNA sequence from clone RP11-173O8 on chro...	44	0.39
23	emb\|Y17797.4\|EFY17797 Enterococcus faecalis gph, ydjH, ydjG, ydj...	44	0.39
24	emb\|AL954689.16\| Zebrafish DNA sequence from clone DKEYP-51G2 in...	44	0.39
25	gb\|CP000301.1\| Rhodopseudomonas palustris BisB18, complete genome	44	0.39
26	gb\|AE016830.1\| Enterococcus faecalis V583, complete genome	44	0.39
27	gb\|CP000151.1\| Burkholderia sp. 383 chromosome 1, complete sequence	42	1.5
28	gb\|AC103387.11\| Mus musculus chromosome 3, clone RP24-383D8, com...	42	1.5
29	emb\|AL808147.21\| Mouse DNA sequence from clone RP23-80N9 on chro...	42	1.5
30	gb\|AC164412.9\| Mus musculus chromosome 3, clone RP24-360M7, comp...	42	1.5
31	dbj\|AP007287.1\| Lotus japonicus genomic DNA, clone:LjT12M13, TM0...	42	1.5
32	dbj\|AP006419.1\| Lotus japonicus genomic DNA, chromosome 4, clone...	42	1.5
33	dbj\|AP006417.1\| Lotus japonicus genomic DNA, chromosome 4, clone...	42	1.5
34	dbj\|AP006375.1\| Lotus japonicus genomic DNA, chromosome 4, clone...	42	1.5
35	dbj\|AP006360.1\| Lotus japonicus genomic DNA, chromosome 4, clone...	42	1.5
36	dbj\|AP006090.1\| Lotus japonicus genomic DNA, chromosome 1, clone...	42	1.5
37	dbj\|AP004909.1\| Lotus japonicus genomic DNA, chromosome 2, clone...	42	1.5
38	dbj\|AP004487.1\| Lotus japonicus genomic DNA, chromosome 5, clone...	42	1.5
39	gb\|AC152184.1\| Medicago truncatula chromosome 7 BAC clone mte1-6...	40	6.0
40	gb\|AC145383.3\| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom...	40	6.0
41	gb\|AC160995.4\| Mus musculus BAC clone RP23-96D5 from chromosome ...	40	6.0
42	gb\|CP000010.1\| Burkholderia mallei ATCC 23344 chromosome 1, comp...	40	6.0
43	gb\|CP000124.1\| Burkholderia pseudomallei 1710b chromosome I, com...	40	6.0
44	gb\|AC144700.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	6.0
45	gb\|CP000359.1\| Deinococcus geothermalis DSM 11300, complete genome	40	6.0
46	gb\|AC114828.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	6.0
47	emb\|Z74619.2\|HSU232G2 Human DNA sequence from clone LL0XNC01-232...	40	6.0
48	emb\|AL591043.11\| Human DNA sequence from clone RP11-357J22 on ch...	40	6.0
49	gb\|CP000316.1\| Polaromonas sp. JS666, complete genome	40	6.0
50	emb\|AL160254.10\| Human DNA sequence from clone RP11-576O3 on chr...	40	6.0
51	emb\|BX571965.1\| Burkholderia pseudomallei strain K96243, chromos...	40	6.0
52	emb\|AL662921.10\| Mouse DNA sequence from clone RP23-397K10 on ch...	40	6.0
53	emb\|AL732379.5\|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0...	40	6.0
54	gb\|AC151521.2\| Medicago truncatula chromosome 7 BAC clone mte1-4...	40	6.0
55	dbj\|AK087026.1\| Mus musculus 0 day neonate lung cDNA, RIKEN full...	40	6.0
56	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.0
57	gb\|AC154482.2\| Mus musculus BAC clone RP23-198P13 from chromosom...	40	6.0
58	emb\|AL646052.1\| Ralstonia solanacearum GMI1000 chromosome comple...	40	6.0
59	gb\|AE016825.1\| Chromobacterium violaceum ATCC 12472, complete ge...	40	6.0
60	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	6.0
61	gb\|AF275345.3\| Lycopersicon esculentum putative permease gene, p...	40	6.0
62	emb\|AL772253.12\| Mouse DNA sequence from clone RP23-101F14 on ch...	40	6.0

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  234 bits (118), Expect = 2e-58
 Identities = 237/276 (85%), Gaps = 3/276 (1%)
 Strand = Plus / Plus

                                                                           
Query: 177     aatccgaccacctctgctccatggtcacccctggttgctcttctggccgaagcgacggcg 236
               |||||||||| |||||||||||||| ||||| ||  ||||||| |||||  |   |||||
Sbjct: 5032454 aatccgaccatctctgctccatggttaccccgggaagctcttccggccgccgttgcggcg 5032513

                                                                           
Query: 237     ccgccttcttcccgat---cggcttcgccgggtttccgacggccgtggttccgcactcca 293
               |||||||||| |||||   ||||||||| ||||| ||||||||||||||||||  | |||
Sbjct: 5032514 ccgccttcttgccgatgatcggcttcgctgggttcccgacggccgtggttccgtccgcca 5032573

                                                                           
Query: 294     cgtctctaagcacgactgcgcccgcaccgatcttcgctccggcaccgatgcgcacattgc 353
               |||| |  |||||||||||||| || ||||||||||||||| | || ||| |||||||||
Sbjct: 5032574 cgtcccgtagcacgactgcgccggctccgatcttcgctccgtcgccaatgtgcacattgc 5032633

                                                                           
Query: 354     ccagcacgctggccccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgc 413
               | |||||||| |||||||||||||| |  || ||||||||||||||||||||||||||||
Sbjct: 5032634 cgagcacgctcgccccggcgccgatcagcacaccgtccccgaccttggggtgccggtcgc 5032693

                                                   
Query: 414     cgcataccttccccgtgccgcccagcgtcacgccgt 449
               || |  ||||||||||||||||||||||||| ||||
Sbjct: 5032694 cggactccttccccgtgccgcccagcgtcaccccgt 5032729



 Score =  151 bits (76), Expect = 2e-33
 Identities = 148/172 (86%)
 Strand = Plus / Minus

                                                                           
Query: 274     ggccgtggttccgcactccacgtctctaagcacgactgcgcccgcaccgatcttcgctcc 333
               |||||||||||||  | ||||||| |  ||||||| ||| || || ||||||| ||||||
Sbjct: 4446689 ggccgtggttccgtccgccacgtcccgtagcacgattgcaccggctccgatctccgctcc 4446630

                                                                           
Query: 334     ggcaccgatgcgcacattgcccagcacgctggccccggcgccgatgaaaaccccgtcccc 393
               | | || ||| |||||||||| |||||||| |||||||||||||| |  || ||||||||
Sbjct: 4446629 gtcgccaatgtgcacattgccgagcacgctcgccccggcgccgatcagcacaccgtcccc 4446570

                                                                   
Query: 394     gaccttggggtgccggtcgccgcataccttccccgtgccgcccagcgtcacg 445
               |||||||||||||||||||||| |  ||||||||||||||||||||||||||
Sbjct: 4446569 gaccttggggtgccggtcgccggactccttccccgtgccgcccagcgtcacg 4446518



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 177     aatccgaccacctctgctccatggtcacccc 207
               |||||||||| |||||||||||||| |||||
Sbjct: 4446765 aatccgaccatctctgctccatggttacccc 4446735



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 389      tccccgaccttggggtgccg 408
                ||||||||||||||||||||
Sbjct: 24651871 tccccgaccttggggtgccg 24651890

to top

>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score =  234 bits (118), Expect = 2e-58
 Identities = 237/276 (85%), Gaps = 3/276 (1%)
 Strand = Plus / Plus

                                                                         
Query: 177   aatccgaccacctctgctccatggtcacccctggttgctcttctggccgaagcgacggcg 236
             |||||||||| |||||||||||||| ||||| ||  ||||||| |||||  |   |||||
Sbjct: 96908 aatccgaccatctctgctccatggttaccccgggaagctcttccggccgccgttgcggcg 96967

                                                                         
Query: 237   ccgccttcttcccgat---cggcttcgccgggtttccgacggccgtggttccgcactcca 293
             |||||||||| |||||   ||||||||| ||||| ||||||||||||||||||  | |||
Sbjct: 96968 ccgccttcttgccgatgatcggcttcgctgggttcccgacggccgtggttccgtccgcca 97027

                                                                         
Query: 294   cgtctctaagcacgactgcgcccgcaccgatcttcgctccggcaccgatgcgcacattgc 353
             |||| |  |||||||||||||| || ||||||||||||||| | || ||| |||||||||
Sbjct: 97028 cgtcccgtagcacgactgcgccggctccgatcttcgctccgtcgccaatgtgcacattgc 97087

                                                                         
Query: 354   ccagcacgctggccccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgc 413
             | |||||||| |||||||||||||| |  || ||||||||||||||||||||||||||||
Sbjct: 97088 cgagcacgctcgccccggcgccgatcagcacaccgtccccgaccttggggtgccggtcgc 97147

                                                 
Query: 414   cgcataccttccccgtgccgcccagcgtcacgccgt 449
             || |  ||||||||||||||||||||||||| ||||
Sbjct: 97148 cggactccttccccgtgccgcccagcgtcaccccgt 97183

to top

>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score =  234 bits (118), Expect = 2e-58
 Identities = 237/276 (85%), Gaps = 3/276 (1%)
 Strand = Plus / Minus

                                                                          
Query: 177    aatccgaccacctctgctccatggtcacccctggttgctcttctggccgaagcgacggcg 236
              |||||||||| |||||||||||||| ||||| ||  ||||||| |||||  |   |||||
Sbjct: 137253 aatccgaccatctctgctccatggttaccccgggaagctcttccggccgccgttgcggcg 137194

                                                                          
Query: 237    ccgccttcttcccgat---cggcttcgccgggtttccgacggccgtggttccgcactcca 293
              |||||||||| |||||   ||||||||| ||||| ||||||||||||||||||  | |||
Sbjct: 137193 ccgccttcttgccgatgatcggcttcgctgggttcccgacggccgtggttccgtccgcca 137134

                                                                          
Query: 294    cgtctctaagcacgactgcgcccgcaccgatcttcgctccggcaccgatgcgcacattgc 353
              |||| |  |||||||||||||| || ||||||||||||||| | || ||| |||||||||
Sbjct: 137133 cgtcccgtagcacgactgcgccggctccgatcttcgctccgtcgccaatgtgcacattgc 137074

                                                                          
Query: 354    ccagcacgctggccccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgc 413
              | |||||||| |||||||||||||| |  || ||||||||||||||||||||||||||||
Sbjct: 137073 cgagcacgctcgccccggcgccgatcagcacaccgtccccgaccttggggtgccggtcgc 137014

                                                  
Query: 414    cgcataccttccccgtgccgcccagcgtcacgccgt 449
              || |  ||||||||||||||||||||||||| ||||
Sbjct: 137013 cggactccttccccgtgccgcccagcgtcaccccgt 136978

to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  234 bits (118), Expect = 2e-58
 Identities = 237/276 (85%), Gaps = 3/276 (1%)
 Strand = Plus / Plus

                                                                           
Query: 177     aatccgaccacctctgctccatggtcacccctggttgctcttctggccgaagcgacggcg 236
               |||||||||| |||||||||||||| ||||| ||  ||||||| |||||  |   |||||
Sbjct: 5031669 aatccgaccatctctgctccatggttaccccgggaagctcttccggccgccgttgcggcg 5031728

                                                                           
Query: 237     ccgccttcttcccgat---cggcttcgccgggtttccgacggccgtggttccgcactcca 293
               |||||||||| |||||   ||||||||| ||||| ||||||||||||||||||  | |||
Sbjct: 5031729 ccgccttcttgccgatgatcggcttcgctgggttcccgacggccgtggttccgtccgcca 5031788

                                                                           
Query: 294     cgtctctaagcacgactgcgcccgcaccgatcttcgctccggcaccgatgcgcacattgc 353
               |||| |  |||||||||||||| || ||||||||||||||| | || ||| |||||||||
Sbjct: 5031789 cgtcccgtagcacgactgcgccggctccgatcttcgctccgtcgccaatgtgcacattgc 5031848

                                                                           
Query: 354     ccagcacgctggccccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgc 413
               | |||||||| |||||||||||||| |  || ||||||||||||||||||||||||||||
Sbjct: 5031849 cgagcacgctcgccccggcgccgatcagcacaccgtccccgaccttggggtgccggtcgc 5031908

                                                   
Query: 414     cgcataccttccccgtgccgcccagcgtcacgccgt 449
               || |  ||||||||||||||||||||||||| ||||
Sbjct: 5031909 cggactccttccccgtgccgcccagcgtcaccccgt 5031944



 Score =  151 bits (76), Expect = 2e-33
 Identities = 148/172 (86%)
 Strand = Plus / Minus

                                                                           
Query: 274     ggccgtggttccgcactccacgtctctaagcacgactgcgcccgcaccgatcttcgctcc 333
               |||||||||||||  | ||||||| |  ||||||| ||| || || ||||||| ||||||
Sbjct: 4446804 ggccgtggttccgtccgccacgtcccgtagcacgattgcaccggctccgatctccgctcc 4446745

                                                                           
Query: 334     ggcaccgatgcgcacattgcccagcacgctggccccggcgccgatgaaaaccccgtcccc 393
               | | || ||| |||||||||| |||||||| |||||||||||||| |  || ||||||||
Sbjct: 4446744 gtcgccaatgtgcacattgccgagcacgctcgccccggcgccgatcagcacaccgtcccc 4446685

                                                                   
Query: 394     gaccttggggtgccggtcgccgcataccttccccgtgccgcccagcgtcacg 445
               |||||||||||||||||||||| |  ||||||||||||||||||||||||||
Sbjct: 4446684 gaccttggggtgccggtcgccggactccttccccgtgccgcccagcgtcacg 4446633



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 177     aatccgaccacctctgctccatggtcacccc 207
               |||||||||| |||||||||||||| |||||
Sbjct: 4446880 aatccgaccatctctgctccatggttacccc 4446850



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 389      tccccgaccttggggtgccg 408
                ||||||||||||||||||||
Sbjct: 24569340 tccccgaccttggggtgccg 24569359

to top

>gb|AF453838.1| Zea mays satase isoform II mRNA, complete cds
          Length = 1172

 Score =  174 bits (88), Expect = 2e-40
 Identities = 232/280 (82%)
 Strand = Plus / Minus

                                                                       
Query: 170 atcacgtaatccgaccacctctgctccatggtcacccctggttgctcttctggccgaagc 229
           ||||||||  |||||||||  ||||||||||| ||||| || |||||||| |||||  ||
Sbjct: 943 atcacgtatgccgaccacccttgctccatggtgaccccaggctgctcttccggccgccgc 884

                                                                       
Query: 230 gacggcgccgccttcttcccgatcggcttcgccgggtttccgacggccgtggttccgcac 289
             |||||||||||||||||||| || ||| || ||||| |||||||||||||| ||   |
Sbjct: 883 tgcggcgccgccttcttcccgaccgccttggcggggttcccgacggccgtggtcccctcc 824

                                                                       
Query: 290 tccacgtctctaagcacgactgcgcccgcaccgatcttcgctccggcaccgatgcgcaca 349
             |||||| |  |||||||| || || || || |||||||| ||||| || | |||||||
Sbjct: 823 ggcacgtcccgtagcacgaccgcccctgctccaatcttcgccccggctccaacgcgcaca 764

                                                                       
Query: 350 ttgcccagcacgctggccccggcgccgatgaaaaccccgtccccgaccttggggtgccgg 409
           ||||| ||||||||||| ||||||||||| |  ||||||||||||||||| |||||||||
Sbjct: 763 ttgccgagcacgctggcgccggcgccgatcagcaccccgtccccgaccttcgggtgccgg 704

                                                   
Query: 410 tcgccgcataccttccccgtgccgcccagcgtcacgccgt 449
           |||||| |  |||| ||||||||||| || || |||||||
Sbjct: 703 tcgccggactcctttcccgtgccgccgagggtgacgccgt 664

to top

>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0042J17, complete sequence
          Length = 171442

 Score =  151 bits (76), Expect = 2e-33
 Identities = 148/172 (86%)
 Strand = Plus / Minus

                                                                         
Query: 274   ggccgtggttccgcactccacgtctctaagcacgactgcgcccgcaccgatcttcgctcc 333
             |||||||||||||  | ||||||| |  ||||||| ||| || || ||||||| ||||||
Sbjct: 51981 ggccgtggttccgtccgccacgtcccgtagcacgattgcaccggctccgatctccgctcc 51922

                                                                         
Query: 334   ggcaccgatgcgcacattgcccagcacgctggccccggcgccgatgaaaaccccgtcccc 393
             | | || ||| |||||||||| |||||||| |||||||||||||| |  || ||||||||
Sbjct: 51921 gtcgccaatgtgcacattgccgagcacgctcgccccggcgccgatcagcacaccgtcccc 51862

                                                                 
Query: 394   gaccttggggtgccggtcgccgcataccttccccgtgccgcccagcgtcacg 445
             |||||||||||||||||||||| |  ||||||||||||||||||||||||||
Sbjct: 51861 gaccttggggtgccggtcgccggactccttccccgtgccgcccagcgtcacg 51810



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 177   aatccgaccacctctgctccatggtcacccc 207
             |||||||||| |||||||||||||| |||||
Sbjct: 52057 aatccgaccatctctgctccatggttacccc 52027

to top

>gb|AF453837.1| Zea mays satase isoform I mRNA, complete cds
          Length = 1162

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 368 ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgccgcataccttcccc 427
           |||||||||||||  || |||||||||| ||||||||||||||||||     |||| || 
Sbjct: 790 ccggcgccgatgagcacgccgtccccgatcttggggtgccggtcgcccaccgccttgccg 731

                             
Query: 428 gtgccgcccagcgtcacg 445
           ||||||||||||||||||
Sbjct: 730 gtgccgcccagcgtcacg 713

to top

>gb|AY108366.1| Zea mays PCO145512 mRNA sequence
          Length = 1315

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 368 ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgccgcataccttcccc 427
           |||||||||||||  || |||||||||| ||||||||||||||||||     |||| || 
Sbjct: 783 ccggcgccgatgagcacgccgtccccgatcttggggtgccggtcgcccaccgccttgccg 724

                             
Query: 428 gtgccgcccagcgtcacg 445
           ||||||||||||||||||
Sbjct: 723 gtgccgcccagcgtcacg 706

to top

>ref|XM_464531.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 897

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 368 ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgccg 415
           |||||||||||||  || ||||| ||||||||||||||||||||||||
Sbjct: 689 ccggcgccgatgagcacgccgtcgccgaccttggggtgccggtcgccg 642

to top

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                   
Query: 394     gaccttggggtgccggtcgccgcataccttccccgtgccgcccagcgtcacg 445
               |||||||||||| |||||||||| | |||| || ||||||||||||||||||
Sbjct: 1994053 gaccttggggtggcggtcgccgctttccttgccggtgccgcccagcgtcacg 1994104

to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                               
Query: 368     ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgccg 415
               |||||||||||||  || ||||| ||||||||||||||||||||||||
Sbjct: 5748812 ccggcgccgatgagcacgccgtcgccgaccttggggtgccggtcgccg 5748859

to top

>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 368   ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgccg 415
             |||||||||||||  || ||||| ||||||||||||||||||||||||
Sbjct: 38326 ccggcgccgatgagcacgccgtcgccgaccttggggtgccggtcgccg 38373

to top

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 395    accttggggtgccggtcgccgcataccttccccgtgccgcccagcgtcacg 445
              ||||||||||| ||||||||||   |||| || ||||||||||||||||||
Sbjct: 945579 accttggggtgacggtcgccgctgtccttgccggtgccgcccagcgtcacg 945629

to top

>ref|NM_191801.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 368 ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgcc 414
           |||||||| ||||  || ||||| |||| ||||||||||||||||||
Sbjct: 710 ccggcgccaatgaggacgccgtcgccgatcttggggtgccggtcgcc 664

to top

>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase
            IV-1 gene, complete cds
          Length = 15000

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 368  ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgcc 414
            |||||||| ||||  || ||||| |||| ||||||||||||||||||
Sbjct: 2448 ccggcgccaatgaggacgccgtcgccgatcttggggtgccggtcgcc 2494

to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 368      ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgcc 414
                |||||||| ||||  || ||||| |||| ||||||||||||||||||
Sbjct: 30036563 ccggcgccaatgaggacgccgtcgccgatcttggggtgccggtcgcc 30036517

to top

>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0690B02
          Length = 153116

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 368   ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgcc 414
             |||||||| ||||  || ||||| |||| ||||||||||||||||||
Sbjct: 32553 ccggcgccaatgaggacgccgtcgccgatcttggggtgccggtcgcc 32507

to top

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 397    cttggggtgccggtcgccgcataccttccccgtgccgcccagcgtcacgcc 447
              |||||| || ||||||||||   |||| || ||||||||||||||||||||
Sbjct: 122591 cttgggatggcggtcgccgccagccttgccggtgccgcccagcgtcacgcc 122541

to top

>dbj|AK102935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J02, full
           insert sequence
          Length = 1157

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 368 ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgcc 414
           |||||||| ||||  || ||||| |||| ||||||||||||||||||
Sbjct: 691 ccggcgccaatgaggacgccgtcgccgatcttggggtgccggtcgcc 645

to top

>dbj|AK102699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103K16, full
           insert sequence
          Length = 1188

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 368 ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgcc 414
           |||||||| ||||  || ||||| |||| ||||||||||||||||||
Sbjct: 711 ccggcgccaatgaggacgccgtcgccgatcttggggtgccggtcgcc 665

to top

>dbj|AK071186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086D18, full
           insert sequence
          Length = 1961

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 368 ccggcgccgatgaaaaccccgtccccgaccttggggtgccggtcgcc 414
           |||||||| ||||  || ||||| |||| ||||||||||||||||||
Sbjct: 781 ccggcgccaatgaggacgccgtcgccgatcttggggtgccggtcgcc 735

to top

>emb|AL590814.5| Human DNA sequence from clone RP11-173O8 on chromosome 6 Contains a
             ribosomal protein L5 (RPL5) pseudogene, complete sequence
          Length = 162540

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 17    atttcataaaaataacaaagaa 38
             ||||||||||||||||||||||
Sbjct: 30700 atttcataaaaataacaaagaa 30721

to top

>emb|Y17797.4|EFY17797 Enterococcus faecalis gph, ydjH, ydjG, ydjI, pbp4 and ydiC, ORF2 and
            ORF3 genes, partial
          Length = 8456

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 12   tcattatttcataaaaataaca 33
            ||||||||||||||||||||||
Sbjct: 2176 tcattatttcataaaaataaca 2197

to top

>emb|AL954689.16| Zebrafish DNA sequence from clone DKEYP-51G2 in linkage group 20
            Contains two CpG islands, complete sequence
          Length = 157208

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 12   tcattatttcataaaaataacaaaga 37
            |||||||||||||||||| |||||||
Sbjct: 2387 tcattatttcataaaaatcacaaaga 2362

to top

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 428     gtgccgcccagcgtcacgccgt 449
               ||||||||||||||||||||||
Sbjct: 3488051 gtgccgcccagcgtcacgccgt 3488072

to top

>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 12      tcattatttcataaaaataaca 33
               ||||||||||||||||||||||
Sbjct: 2402505 tcattatttcataaaaataaca 2402484

to top

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 427     cgtgccgcccagcgtcacgcc 447
               |||||||||||||||||||||
Sbjct: 2455451 cgtgccgcccagcgtcacgcc 2455471

to top

>gb|AC103387.11| Mus musculus chromosome 3, clone RP24-383D8, complete sequence
          Length = 157053

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 9      ttgtcattatttcataaaaat 29
              |||||||||||||||||||||
Sbjct: 152966 ttgtcattatttcataaaaat 152986

to top

>emb|AL808147.21| Mouse DNA sequence from clone RP23-80N9 on chromosome 4, complete
              sequence
          Length = 233270

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 184    ccacctctgctccatggtcac 204
              |||||||||||||||||||||
Sbjct: 156446 ccacctctgctccatggtcac 156466

to top

>gb|AC164412.9| Mus musculus chromosome 3, clone RP24-360M7, complete sequence
          Length = 172583

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     ttgtcattatttcataaaaat 29
             |||||||||||||||||||||
Sbjct: 61991 ttgtcattatttcataaaaat 62011

to top

>dbj|AP007287.1| Lotus japonicus genomic DNA, clone:LjT12M13, TM0054b, complete sequence
          Length = 77961

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 17    atttcataaaaataacaaagaagat 41
             ||||||||||||||| |||||||||
Sbjct: 70767 atttcataaaaataaaaaagaagat 70791

to top

>dbj|AP006419.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT43O18, TM0307,
             complete sequence
          Length = 119858

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 17    atttcataaaaataacaaagaagat 41
             ||||||||||||||| |||||||||
Sbjct: 15977 atttcataaaaataaaaaagaagat 15953

to top

>dbj|AP006417.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT05D12, TM0303,
              complete sequence
          Length = 123806

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 17     atttcataaaaataacaaagaagat 41
              ||||||||||||||| |||||||||
Sbjct: 100383 atttcataaaaataaaaaagaagat 100359

to top

>dbj|AP006375.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32M04, TM0219,
            complete sequence
          Length = 72880

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 17   atttcataaaaataacaaagaagat 41
            ||||||||||||||| |||||||||
Sbjct: 6995 atttcataaaaataaaaaagaagat 7019

to top

>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108,
             complete sequence
          Length = 117124

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 17    atttcataaaaataacaaagaagat 41
             ||||||||||||||| |||||||||
Sbjct: 82933 atttcataaaaataaaaaagaagat 82957

to top

>dbj|AP006090.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26D17, TM0154,
             complete sequence
          Length = 85795

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 17    atttcataaaaataacaaagaagat 41
             ||||||||||||||| |||||||||
Sbjct: 54305 atttcataaaaataaaaaagaagat 54329

to top

>dbj|AP004909.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12O09, TM0067a,
             complete sequence
          Length = 82389

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 17    atttcataaaaataacaaagaagat 41
             ||||||||||||||| |||||||||
Sbjct: 35807 atttcataaaaataaaaaagaagat 35831

to top

>dbj|AP004487.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05B20, TM0019b,
             complete sequence
          Length = 72735

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 17    atttcataaaaataacaaagaagat 41
             ||||||||||||||| |||||||||
Sbjct: 16322 atttcataaaaataaaaaagaagat 16346

to top

>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete sequence
          Length = 103090

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 9      ttgtcattatttcataaaaataac 32
              |||||||||||| |||||||||||
Sbjct: 101674 ttgtcattatttgataaaaataac 101697

to top

>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
             sequence
          Length = 141691

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   tccccgaccttggggtgccg 408
             ||||||||||||||||||||
Sbjct: 28057 tccccgaccttggggtgccg 28076

to top

>gb|AC160995.4| Mus musculus BAC clone RP23-96D5 from chromosome 13, complete sequence
          Length = 235237

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tcattatttcataaaaataa 31
             ||||||||||||||||||||
Sbjct: 77145 tcattatttcataaaaataa 77126

to top

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 311     gcgcccgcaccgatcttcgctccggcaccgat 342
               ||||| |||||||||||||| ||||| |||||
Sbjct: 2975220 gcgccggcaccgatcttcgcgccggcgccgat 2975189

to top

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 311    gcgcccgcaccgatcttcgctccggcaccgat 342
              ||||| |||||||||||||| ||||| |||||
Sbjct: 102649 gcgccggcaccgatcttcgcgccggcgccgat 102618

to top

>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0017H17, complete sequence
          Length = 156331

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     ttatttcataaaaataacaa 34
              ||||||||||||||||||||
Sbjct: 152984 ttatttcataaaaataacaa 152965

to top

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 425    cccgtgccgcccagcgtcacgccg 448
              |||||||||||||||| |||||||
Sbjct: 190499 cccgtgccgcccagcgccacgccg 190522

to top

>gb|AC114828.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0038L23, complete sequence
          Length = 124582

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ttatttcataaaaataacaa 34
             ||||||||||||||||||||
Sbjct: 51946 ttatttcataaaaataacaa 51927

to top

>emb|Z74619.2|HSU232G2 Human DNA sequence from clone LL0XNC01-232G2 on chromosome X Contains
            part of the IL1RAPL2 gene for  interleukin 1 receptor
            accessory protein-like 2, complete sequence
          Length = 37392

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   caaagaagatagtatgtgac 51
            ||||||||||||||||||||
Sbjct: 7123 caaagaagatagtatgtgac 7142

to top

>emb|AL591043.11| Human DNA sequence from clone RP11-357J22 on chromosome 1 Contains a
             proteolipid protein 2 (colonic epithelium-enriched) (PLP2)
             pseudogene, a mortality factor 4 (MORF4) pseudogene and a
             CPG island, complete sequence
          Length = 147109

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tatttcataaaaataacaaa 35
             ||||||||||||||||||||
Sbjct: 18027 tatttcataaaaataacaaa 18008

to top

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 428     gtgccgcccagcgtcacgcc 447
               ||||||||||||||||||||
Sbjct: 3487525 gtgccgcccagcgtcacgcc 3487544

to top

>emb|AL160254.10| Human DNA sequence from clone RP11-576O3 on chromosome 13, complete
             sequence
          Length = 139881

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    ataaaaataacaaagaagat 41
             ||||||||||||||||||||
Sbjct: 62518 ataaaaataacaaagaagat 62537

to top

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 311     gcgcccgcaccgatcttcgctccggcaccgat 342
               ||||| |||||||||||||| ||||| |||||
Sbjct: 3948197 gcgccggcaccgatcttcgcgccggcgccgat 3948166

to top

>emb|AL662921.10| Mouse DNA sequence from clone RP23-397K10 on chromosome 11 Contains a
            CpG island, complete sequence
          Length = 141754

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 23   taaaaataacaaagaagata 42
            ||||||||||||||||||||
Sbjct: 5430 taaaaataacaaagaagata 5449

to top

>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136470

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   tccccgaccttggggtgccg 408
             ||||||||||||||||||||
Sbjct: 83917 tccccgaccttggggtgccg 83936

to top

>gb|AC151521.2| Medicago truncatula chromosome 7 BAC clone mte1-49d11, complete
             sequence
          Length = 111733

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tcattatttcataaaaataa 31
             ||||||||||||||||||||
Sbjct: 50308 tcattatttcataaaaataa 50289

to top

>dbj|AK087026.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030020K22 product:unclassifiable, full
            insert sequence
          Length = 2484

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   tcattatttcataaaaataa 31
            ||||||||||||||||||||
Sbjct: 2240 tcattatttcataaaaataa 2259

to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 15       ttatttcataaaaataacaa 34
                ||||||||||||||||||||
Sbjct: 21942141 ttatttcataaaaataacaa 21942122

to top

>gb|AC154482.2| Mus musculus BAC clone RP23-198P13 from chromosome 13, complete
             sequence
          Length = 214193

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    tcattatttcataaaaataa 31
             ||||||||||||||||||||
Sbjct: 11526 tcattatttcataaaaataa 11545

to top

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 428     gtgccgcccagcgtcacgcc 447
               ||||||||||||||||||||
Sbjct: 1221296 gtgccgcccagcgtcacgcc 1221277

to top

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 429     tgccgcccagcgtcacgccg 448
               ||||||||||||||||||||
Sbjct: 2657229 tgccgcccagcgtcacgccg 2657248

to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 15       ttatttcataaaaataacaa 34
                ||||||||||||||||||||
Sbjct: 22252131 ttatttcataaaaataacaa 22252112

to top

>gb|AF275345.3| Lycopersicon esculentum putative permease gene, partial cds;
             suppressor-like protein, putative centromere protein,
             putative auxin growth promotor protein, and putative
             protein phosphatase genes, complete cds; LTR-A long
             terminal repeat, complete sequence; putative copia-like
             polyprotein gene, complete cds; LTR-B long terminal
             repeat, complete sequence; MADS-box transcription factor
             JOINTLESS gene, complete cds; TH65-like protein gene,
             partial cds; and unknown genes
          Length = 118761

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    attatttcataaaaataaca 33
             ||||||||||||||||||||
Sbjct: 17940 attatttcataaaaataaca 17921

to top

>emb|AL772253.12| Mouse DNA sequence from clone RP23-101F14 on chromosome 2, complete
              sequence
          Length = 156657

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     aaataacaaagaagatagta 45
              ||||||||||||||||||||
Sbjct: 143618 aaataacaaagaagatagta 143599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,348,547
Number of Sequences: 3902068
Number of extensions: 3348547
Number of successful extensions: 77758
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76575
Number of HSP's gapped (non-prelim): 1173
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result