Clone Information

BLAST Search Result

Clone Name	rbart40h12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1....	87	3e-17
2	UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	87	3e-17
3	UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	87	3e-17
4	UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	87	3e-17
5	UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	84	3e-16
6	UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	83	3e-16
7	GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (G...	50	3e-06
8	FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.2...	48	2e-05
9	GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (G...	48	2e-05
10	FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2...	44	2e-04
11	GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-...	44	2e-04
12	FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-...	44	2e-04
13	GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	43	5e-04
14	FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2...	42	7e-04
15	Y1055_METJA (Q58455) Hypothetical protein MJ1055	38	0.013
16	GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	37	0.022
17	EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-ga...	37	0.022
18	GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	37	0.037
19	RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-...	36	0.049
20	ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA prote...	36	0.049
21	ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA prote...	36	0.049
22	GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	35	0.084
23	ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA prote...	35	0.14
24	GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	35	0.14
25	ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA prote...	34	0.19
26	ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA prote...	34	0.19
27	Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF	34	0.24
28	ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA prote...	34	0.24
29	ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA prote...	33	0.32
30	ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA prote...	33	0.32
31	FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271) (GDP-4...	33	0.41
32	GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	33	0.41
33	ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA prote...	32	0.71
34	ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA prote...	32	0.71
35	EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	32	1.2
36	TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)	32	1.2
37	GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	32	1.2
38	ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA prote...	32	1.2
39	Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL	31	1.6
40	MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac...	31	2.1
41	CINA_BACHK (Q6HF34) CinA-like protein	30	2.7
42	CINA_BACCZ (Q636P5) CinA-like protein	30	2.7
43	CINA_BACC1 (Q732U5) CinA-like protein	30	2.7
44	CINA_BACAN (Q81WQ3) CinA-like protein	30	2.7
45	YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'regio...	30	2.7
46	GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) ...	30	2.7
47	RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination prote...	30	3.5
48	CAPI_STAAU (P39858) Protein capI	30	3.5
49	ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA prote...	30	3.5
50	TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)	30	4.6
51	TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)	30	4.6
52	CINA_BACCR (Q81A15) CinA-like protein	30	4.6
53	NIR_SPIOL (P05314) Ferredoxin--nitrite reductase, chloroplast pr...	30	4.6
54	HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82	30	4.6
55	SEC10_YEAST (Q06245) Exocyst complex component SEC10	29	6.0
56	ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA prote...	29	6.0
57	METE_PHOPR (Q6LSD6) 5-methyltetrahydropteroyltriglutamate--homoc...	29	6.0
58	NU2C_MARPO (P06257) NAD(P)H-quinone oxidoreductase chain 2, chlo...	29	7.8
59	ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f an...	29	7.8
60	GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (G...	29	7.8
61	Y803_METJA (Q58213) Hypothetical protein MJ0803	29	7.8
62	SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit	29	7.8

>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = -1

Query: 496 ADMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 317
           +D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++RK
Sbjct: 303 SDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRK 362

Query: 316 PDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           PDI KAK +L WEP V L +GL      FR+ L
Sbjct: 363 PDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395

to top

>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = -1

Query: 496 ADMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 317
           +D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++RK
Sbjct: 303 SDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRK 362

Query: 316 PDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           PDI KAK +L WEP V L +GL      FR+ L
Sbjct: 363 PDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395

to top

>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = -1

Query: 496 ADMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 317
           +D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++RK
Sbjct: 303 SDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRK 362

Query: 316 PDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           PDI KAK +L WEP V L +GL      FR+ L
Sbjct: 363 PDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395

to top

>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 42/93 (45%), Positives = 59/93 (63%)
 Frame = -1

Query: 496 ADMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 317
           +D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++RK
Sbjct: 303 SDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRK 362

Query: 316 PDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           PDI KAK +L WEP V L +GL      FR+ L
Sbjct: 363 PDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395

to top

>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 418

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 38/82 (46%), Positives = 55/82 (67%)
 Frame = -1

Query: 496 ADMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 317
           +D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       DDP++R+
Sbjct: 301 SDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRR 360

Query: 316 PDITKAKEVLDWEPKVVLRDGL 251
           PDI KAK +L WEP V L +GL
Sbjct: 361 PDIRKAKLLLGWEPVVPLEEGL 382

to top

>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 421

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 39/93 (41%), Positives = 60/93 (64%)
 Frame = -1

Query: 496 ADMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 317
           +D+VNGL+ LMN + + P+N+GNP E ++++ A  +K+L+     ++      DDP++RK
Sbjct: 304 SDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRK 363

Query: 316 PDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           PDI KAK +L WEP V L +GL      FR+ L
Sbjct: 364 PDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396

to top

>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 2)
          Length = 371

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 35/102 (34%), Positives = 52/102 (50%)
 Frame = -1

Query: 493 DMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 314
           + V G++RL   D   P+NIG+    +M E+AE V    N ++ +      P+  R R  
Sbjct: 244 ECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPG-PEGVRGRNS 302

Query: 313 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 188
           D T  KE L W P + L+DGL +     +E+L   +K KA G
Sbjct: 303 DNTLIKEKLGWAPTMRLKDGLRITYFWIKEQL---EKEKAEG 341

to top

>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1)
          Length = 328

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 27/80 (33%), Positives = 46/80 (57%)
 Frame = -1

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 263
           +N+G+  E T+ ELAE VKE++  +  +    + PD   ++  D +K +E + W+PKV L
Sbjct: 250 VNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPL 308

Query: 262 RDGLVLMEDDFRERLAVPKK 203
           ++GLV     + E +   KK
Sbjct: 309 KEGLVETYKWYVENVISAKK 328

to top

>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 1) (OsGME-1)
          Length = 378

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 28/81 (34%), Positives = 42/81 (51%)
 Frame = -1

Query: 493 DMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 314
           + V G++RL   D   P+NIG+    +M E+AE +    + E+ +      P+  R R  
Sbjct: 251 ECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG-PEGVRGRNS 309

Query: 313 DITKAKEVLDWEPKVVLRDGL 251
           D T  KE L W P + L+DGL
Sbjct: 310 DNTLIKEKLGWAPTMKLKDGL 330

to top

>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2)
          Length = 347

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/82 (34%), Positives = 45/82 (54%)
 Frame = -1

Query: 496 ADMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 317
           A+ V  LM   +G+    +N+G+  E T+ ELAE V+ ++  E  V      P+   +R 
Sbjct: 250 AEAVVVLMERYSGEEH--VNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRV 307

Query: 316 PDITKAKEVLDWEPKVVLRDGL 251
            D  + ++ L WEP+V LRDG+
Sbjct: 308 VDSGRMRK-LGWEPRVALRDGI 328

to top

>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase)
          Length = 377

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 31/102 (30%), Positives = 50/102 (49%)
 Frame = -1

Query: 493 DMVNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKP 314
           + V G++RL   D   P+NIG+    +M E+AE V      ++ +      P+  R R  
Sbjct: 250 ECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-PEGVRGRNS 308

Query: 313 DITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 188
           D    KE L W P + L++GL +     +E++   +K KA G
Sbjct: 309 DNNLIKEKLGWAPNMRLKEGLRITYFWIKEQI---EKEKAKG 347

to top

>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1) (AtGER1) (AtFX)
          Length = 312

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -1

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 263
           +NIG+  E T+ ELAE VKE++  E  +      PD   ++  D +K    L W PKV L
Sbjct: 236 VNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLAS-LGWTPKVSL 294

Query: 262 RDGL 251
           RDGL
Sbjct: 295 RDGL 298

to top

>GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 330

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = -1

Query: 478 LMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKA 299
           L  +M  + +   N+G    ++ LE+ E+ K++   ++  TM      DP     D TKA
Sbjct: 237 LKHMMKTNKSDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMGPRRGGDPDSLVADSTKA 296

Query: 298 KEVLDWEPK 272
           + VL W+PK
Sbjct: 297 RTVLGWKPK 305

to top

>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2) (AtGER2)
          Length = 328

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 25/80 (31%), Positives = 42/80 (52%)
 Frame = -1

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 263
           +N+G+  E T+ ELAE VKE++  +  +      PD   ++  D +K    L W PK+ L
Sbjct: 250 VNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLAS-LGWTPKISL 308

Query: 262 RDGLVLMEDDFRERLAVPKK 203
           +DGL    + + E +   K+
Sbjct: 309 KDGLSQTYEWYLENVVQKKQ 328

to top

>Y1055_METJA (Q58455) Hypothetical protein MJ1055|
          Length = 326

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 20/83 (24%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = -1

Query: 496 ADMVNGLMRLMNGDNTGPI-NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQR 320
           +D+V+G++R +  D    I N+GN     ++   E +++ +N +           D  + 
Sbjct: 227 SDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRT 286

Query: 319 KPDITKAKEVLDWEPKVVLRDGL 251
             D++K++++L ++PKV + +GL
Sbjct: 287 YADLSKSEKLLGYKPKVTIEEGL 309

to top

>GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 331

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -1

Query: 460 GDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDW 281
           G+ +   NIG+   F+ LE+    +++   E+  TM      DP        KA+++L W
Sbjct: 243 GNKSSAFNIGSAHGFSNLEILNAARKVTGQEIPATMGPRRAGDPSTLIASSEKARDILGW 302

Query: 280 EP 275
           +P
Sbjct: 303 KP 304

to top

>EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose|
           4-epimerase) (Galactowaldenase)
          Length = 348

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 22/80 (27%), Positives = 36/80 (45%)
 Frame = -1

Query: 487 VNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDI 308
           V  L+ L  G  +  +N G     ++ E+   ++E+   +V  T  +  P DP Q     
Sbjct: 242 VLALLHLRRGGGSLLMNCGYGRGASVREVVRTLEEVSGEQVPATFADRRPGDPPQLVAGA 301

Query: 307 TKAKEVLDWEPKVVLRDGLV 248
            + +E L W PK    DG+V
Sbjct: 302 DRIREQLGWVPKHDRLDGIV 321

to top

>GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 332

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = -1

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 290
           L  G+ +   N+G+   F+ L++ E  +++   E+     +  P DP        KA+ V
Sbjct: 241 LRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKADRRPGDPDILIASSEKARTV 300

Query: 289 LDWEPK 272
           L W+P+
Sbjct: 301 LGWKPQ 306

to top

>RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-tyvelose|
           2-epimerase)
          Length = 338

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -1

Query: 439 NIGNP--GEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 266
           NIG       ++LEL + +++  N ++  T       D R    DI K    +DW PKV 
Sbjct: 264 NIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVS 323

Query: 265 LRDGLVLMED 236
            +DG+  M D
Sbjct: 324 AKDGVQKMYD 333

to top

>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
 Frame = -1

Query: 442 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659

to top

>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
 Frame = -1

Query: 442 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659

to top

>GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 339

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = -1

Query: 487 VNGLMRLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDI 308
           V  L +++N       N+G    +++LE+ +  +++   EV     +  P D      D 
Sbjct: 243 VKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRRPGDIATCFADP 302

Query: 307 TKAKEVLDWEPK 272
            KAK  L WE K
Sbjct: 303 AKAKRELGWEAK 314

to top

>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 668

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 23/103 (22%)
 Frame = -1

Query: 496 ADMVNGLMRLMNGDNT----GPINIGNP-GEFTMLELAENVKELINPEVTVTMTENTP-- 338
           AD +  L R+++ +N       INIGNP  E ++ +L E   EL+       +  N P  
Sbjct: 543 ADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGE---ELLRQFEAHPLRGNFPPF 599

Query: 337 ----------------DDPRQRKPDITKAKEVLDWEPKVVLRD 257
                            D   RKP I  AK +L+WEP V + +
Sbjct: 600 AGFRDVESKAFYGAGYQDVEHRKPSIDNAKRLLNWEPTVEMSE 642

to top

>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 334

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = -1

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 290
           L     +G  N+GN   F++ E+ E  +++    +   +      DP        KA+ +
Sbjct: 239 LRKDGQSGSFNLGNGKGFSVKEVIEVCRQVTGHPIPAEIAPRRSGDPASLIASSEKAQTI 298

Query: 289 LDWEPK 272
           L WEPK
Sbjct: 299 LGWEPK 304

to top

>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 654

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
 Frame = -1

Query: 463 NGDNTGPINIGNP-GEFTMLELAENVKELINPEVTVTMTENTP----------------- 338
           N  N   INIGNP  E+T+++L    K +IN   +     N P                 
Sbjct: 555 NKCNKKIINIGNPHNEYTIMQLT---KIIINIIYSNNRNYNFPKFSGFNMLSGTNYYGEG 611

Query: 337 -DDPRQRKPDITKAKEVLDWEPKVVLR 260
             D  +RKP+I  AK++L+W PK  +R
Sbjct: 612 YQDIDRRKPNIDIAKKLLNWTPKTKIR 638

to top

>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
 Frame = -1

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A+  LDWEPK+ +++
Sbjct: 623 IRNARRCLDWEPKIDMQE 640

to top

>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF|
          Length = 314

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 24/85 (28%), Positives = 39/85 (45%)
 Frame = -1

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 290
           L +   T  INIG+ GE +++ELA  V  ++  +  +    + PD    RK   ++    
Sbjct: 229 LKHYSETEHINIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPDG-TPRKLLSSERLVS 287

Query: 289 LDWEPKVVLRDGLVLMEDDFRERLA 215
           + W PK  L  GL    + F   +A
Sbjct: 288 MGWRPKTSLELGLAKSYESFVSNVA 312

to top

>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 20/118 (16%)
 Frame = -1

Query: 493 DMVNGLMRLM--NGDNTGP--INIGNP-GEFTMLELAENVKELIN---------PEVTVT 356
           D +  L R++  +GD      INIGNP  E ++ ELA  + +  +         P     
Sbjct: 542 DGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQ 601

Query: 355 MTENTP------DDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           + E+         D   RKP I  A+  L WEP + +RD +    D F   + + ++A
Sbjct: 602 VVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDIAERA 659

to top

>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 662

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -1

Query: 334 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA 194
           D   RKP I  A+ +LDW+P + LR+ +    D F       ++A+A
Sbjct: 616 DVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFLHEALREREAQA 662

to top

>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 334 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           D   RKP I  A+  L WEP + +RD +    D F   + V ++A
Sbjct: 615 DVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAERA 659

to top

>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase)
          Length = 321

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 457 DNTGP----INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 290
           +NT P    IN+G   + T+ ELA+ + +++  +  V    + PD   ++  D+T+  + 
Sbjct: 234 ENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQ- 292

Query: 289 LDWEPKVVLRDGL 251
           L W  ++ L  GL
Sbjct: 293 LGWYHEISLEAGL 305

to top

>GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 333

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -1

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 290
           L  G+ +   N+G+   F+ L++ E  +++   ++          DP        KA+EV
Sbjct: 242 LRQGNPSTAFNLGSSTGFSNLQILEAARKVTGQKIPAEKAARRSGDPDTLIASSEKAREV 301

Query: 289 LDWEPK 272
           L W+P+
Sbjct: 302 LGWKPQ 307

to top

>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -1

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640

to top

>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -1

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHHCLDWEPKIDMQE 640

to top

>EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
          Length = 328

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -1

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 290
           L+ G  +  +N+G     T+ EL + ++++      +   E    D      +  KA++V
Sbjct: 242 LLEGGESVALNLGTGTGTTVKELLDAIEKVAKRPFNIGYAERREGDSTTLVANNDKARQV 301

Query: 289 LDWEPK 272
           L WEP+
Sbjct: 302 LGWEPQ 307

to top

>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 350

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
 Frame = -1

Query: 493 DMVNGLMRLMNGDNTGPI-NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRK 317
           D+V   + ++     G I NIG   E ++++LA+ + +LI    + +  EN  D    R 
Sbjct: 237 DVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRP 296

Query: 316 PDIT----KAKEV--LDWEPKVVLRDGLVLMEDDFRE 224
            +      K++++  L W PKV  ++G+    + +RE
Sbjct: 297 TNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRE 333

to top

>GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 329

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = -1

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 260
           N+GN   F++ E+ E V+ +    +   M      DP         A+E L W P    R
Sbjct: 249 NLGNGNGFSVREVVETVRRVTGHPIPEIMAPRRGRDPAVLVASAGTAREKLGWNPS---R 305

Query: 259 DGLVLMEDDFRERLAVPK 206
             L ++ D +    + PK
Sbjct: 306 ADLAIVSDAWEWHSSHPK 323

to top

>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -1

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSCYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640

to top

>Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL|
          Length = 356

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = -1

Query: 313 DITKAKEVLDWEPKVVLRDGL 251
           DITKA++VL + PK+ LR+G+
Sbjct: 322 DITKARKVLGYAPKIALREGM 342

to top

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
           (High molecular weight salivary mucin MG1) (Sublingual
           gland mucin)
          Length = 5703

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -2

Query: 285 TGSPRSSYVTAWCSWRTTSGSVWQCPRRPRPKATSLR-LAYITNLPEHTHSWVGSSIFV 112
           T SP +S+ T  CS  T SG +WQC   P P   S++  A+I+   E  +   G   +V
Sbjct: 394 TYSPGTSFNTT-CSSCTCSGGLWQCQDLPCPGTCSVQGGAHISTYDEKLYDLHGDCSYV 451

to top

>CINA_BACHK (Q6HF34) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -1

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398

to top

>CINA_BACCZ (Q636P5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -1

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398

to top

>CINA_BACC1 (Q732U5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -1

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398

to top

>CINA_BACAN (Q81WQ3) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -1

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398

to top

>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)|
          Length = 334

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 14/63 (22%), Positives = 29/63 (46%)
 Frame = -1

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 260
           NIGN     +++  + +++ +  E    M    P D  +   D     EV+ + P+  ++
Sbjct: 259 NIGNSSPVELMDYIQALEDALGIEAKKNMLPLQPGDVLETSADTKALYEVIGFTPETTVK 318

Query: 259 DGL 251
           DG+
Sbjct: 319 DGV 321

to top

>GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase 1) (GMD 1)
          Length = 361

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -1

Query: 340 PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAK 197
           P +    K D +KAKE+L W+PKV     + +M D   E L + K+ K
Sbjct: 303 PTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVD---EDLELAKREK 347

to top

>RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination protein O)|
          Length = 234

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
 Frame = -2

Query: 312 TSQRQRRFLTGSPRSSYVTAWCSWRTTSGS----------VWQCPRRPRPKATSLRLAYI 163
           T  + R+ L G  ++ + T   S+R    +           WQ   +P P+  SL L ++
Sbjct: 62  TPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQ--EKPSPQLFSLFLNFL 119

Query: 162 TNLPEHTHSWVGSSIFV 112
             +PE  H +  SS+F+
Sbjct: 120 QRIPETPHPYFFSSMFL 136

to top

>CAPI_STAAU (P39858) Protein capI|
          Length = 334

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/72 (20%), Positives = 32/72 (44%)
 Frame = -1

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 260
           NIGN     ++E  E ++  +  E      +  P D  +   ++      +D++P+  ++
Sbjct: 259 NIGNNSPVRLMEFVEAIENKLGKEARKNYMDLQPGDVPETYANVDDLFRDIDFKPETTIQ 318

Query: 259 DGLVLMEDDFRE 224
           DG+    D + E
Sbjct: 319 DGVNKFVDWYLE 330

to top

>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 16/77 (20%)
 Frame = -1

Query: 442 INIGNP-GEFTMLELAE---------NVKELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ +LAE          +++   P       E+         D   RKP 
Sbjct: 563 INIGNPTNEASIRQLAEILLDSFEDHELRDHFPPFAGFKKVESGSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLR 260
           I  A+ +LDW+P + ++
Sbjct: 623 IKNAERLLDWKPTIDMK 639

to top

>TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -1

Query: 310 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 167
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 166 H 164
           H
Sbjct: 646 H 646

to top

>TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -1

Query: 310 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 167
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 166 H 164
           H
Sbjct: 646 H 646

to top

>CINA_BACCR (Q81A15) CinA-like protein|
          Length = 412

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -1

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVK+++  ++ ++ T    PD   Q++P        +  EP VV    L       R
Sbjct: 335 LAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERTA 398

to top

>NIR_SPIOL (P05314) Ferredoxin--nitrite reductase, chloroplast precursor (EC|
           1.7.7.1)
          Length = 594

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 19/83 (22%), Positives = 36/83 (43%)
 Frame = -1

Query: 445 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 266
           P+N   P   T+L  + N +   N  +      +   +     P +  A+     EP+V 
Sbjct: 5   PVNKIIPSSTTLLSSSNNNRRRNNSSIRCQKAVSPAAETAAVSPSVDAAR----LEPRVE 60

Query: 265 LRDGLVLMEDDFRERLAVPKKAK 197
            RDG  +++++FR  +   +K K
Sbjct: 61  ERDGFWVLKEEFRSGINPAEKVK 83

to top

>HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82|
          Length = 704

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -1

Query: 406 ELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           ++ ENVKEL     T  +    P +  Q + +        DWE  + ++   V  + +FR
Sbjct: 254 KVKENVKELEELNKTKPLWTRNPSEVTQEEYNAFYKSISNDWEDPLAVKHFSVEGQLEFR 313

Query: 226 ERLAVPKKA 200
             L +PK+A
Sbjct: 314 AILFIPKRA 322

to top

>SEC10_YEAST (Q06245) Exocyst complex component SEC10|
          Length = 871

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -1

Query: 466 MNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDP 329
           +N  NT   +  N    T  ++A N   L+N   T +  +N+P+ P
Sbjct: 520 LNRTNTLSDSFNNSSSSTQYDVANNSSSLVNSSFTASDIDNSPNSP 565

to top

>ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 663

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 24/118 (20%)
 Frame = -1

Query: 496 ADMVNGLMRLM-NGD---NTGPINIGNP-GEFTMLELAENVKELINPEVTVTMTENTP-- 338
           AD +  L R++ N D   N   INIGNP  E ++ +L E   EL+       +  N P  
Sbjct: 543 ADGIEALARIIENRDGCCNGQIINIGNPDNEASIRQLGE---ELLRQFEAHPLRGNFPPF 599

Query: 337 ----------------DDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDF-RERLA 215
                            D   RKP I  A++++ W P + L + +    D F RE +A
Sbjct: 600 AGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELSETIGKTLDFFLREAMA 657

to top

>METE_PHOPR (Q6LSD6) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 766

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 335 IRSVLSHRHCHLWVDQLLHVLSKFQHGEFTWVPNVNGSSVVSIHQPHK 478
           + S+L HRH   W DQ+   L     G+F W  +V  +S++  H P +
Sbjct: 45  VGSLLRHRH---WGDQVGAGLDYVSVGDFAWYDHVLNTSMLLGHIPKR 89

to top

>NU2C_MARPO (P06257) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain 2)
           (NADH-plastoquinone oxidoreductase chain 2)
          Length = 501

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +3

Query: 291 TSFAFVMSGFLWR-GSSGVFSVIVTVTSGLINSFTFSASSSMV 416
           TS + +  GF W  G SG  + I  +T+GL+N+ T+++S + +
Sbjct: 172 TSSSILAYGFSWLYGLSGGETNIQKITNGLLNAETYNSSGTFI 214

to top

>ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)|
           [Contains: Integrin alpha-6 heavy chain; Integrin
           alpha-6 light chain]
          Length = 1091

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
 Frame = -1

Query: 433 GNPGEFTMLELAENVKELINP-------EVTVTMTENTPDDPRQRKPDITKAKEVLDWEP 275
           GN  +F+ L + + + EL+         E+TVT + + P +PR+   D  +AK +  +  
Sbjct: 647 GNQDKFSYLPIQKGIPELVLKDQKDIALEITVTNSPSDPRNPRKDGDDAHEAKLIATFPD 706

Query: 274 KVVLRDGLVLMEDDFRERLAVPKK 203
                    L    +RE  A P+K
Sbjct: 707 --------TLTYSAYRELRAFPEK 722

to top

>GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase) (GMD)
          Length = 372

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 388 KELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKV 269
           KE     VTV +    P +    + D TKAK+ L+W+P+V
Sbjct: 310 KETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRV 349

to top

>Y803_METJA (Q58213) Hypothetical protein MJ0803|
          Length = 172

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 21  GYKVSNNTIFQVNDKGVIGLLELKFRNETQQRI 119
           GYK+ NN I  +  KGV   + LK+  E +  I
Sbjct: 133 GYKIENNKIILIGKKGVTYPVHLKYSKELEDII 165

to top

>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit|
          Length = 940

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -1

Query: 304 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 203
           KAKE+ + +   ++RDG VL+ D+F  R+ + ++
Sbjct: 296 KAKELFNRDKDYIVRDGEVLIVDEFTGRVLIGRR 329


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,264,800
Number of Sequences: 219361
Number of extensions: 1585811
Number of successful extensions: 4597
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 4453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4591
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result