>SCS7_YEAST (Q03529) Inositolphosphorylceramide-B C-26 hydroxylase (EC 1.-.-.-)|
           (IPC-B hydroxylase)
          Length = 384

 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -2

Query: 493 YLHHAH-PSFDPAKYLKKYHLNHHFRIQNKGFGITSTLWDHVFGT 362
           +LHH+  P F   + LKKYHL HH++    GFG+TS  WD VFGT
Sbjct: 328 FLHHSKLPPF--MRKLKKYHLEHHYKNYQLGFGVTSWFWDEVFGT 370

>YFI3_ECOLI (Q99342) Putative endonuclease precursor (EC 3.1.-.-) (ORFA)|
          Length = 153

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
 Frame = -1

Query: 440 PS*PSLQNS----KQGLWNNIDPVGPRIW 366
           P  P LQN     K+GLW++ DPV P IW
Sbjct: 121 PVLPVLQNEARQQKRGLWSDADPVPPWIW 149

>YFI3_ECO57 (Q7BSX4) Putative endonuclease precursor (EC 3.1.-.-)|
          Length = 153

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
 Frame = -1

Query: 440 PS*PSLQNS----KQGLWNNIDPVGPRIW 366
           P  P LQN     K+GLW++ DPV P IW
Sbjct: 121 PVLPVLQNEARQQKRGLWSDADPVPPWIW 149

>TOR1_SCHPO (O14356) Phosphatidylinositol 3-kinase tor1 (EC 2.7.1.137)|
            (PtdIns-3-kinase tor1) (PI3-kinase tor1) (PI3K tor1)
          Length = 2335

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = -1

Query: 182  LEHMLSCVQRGFSIC*YSTRVVHLWLLVSSIIFGT---K*LHALLDIICKFYQ 33
            L  +LSC+ + FS+   S+R V   +L S +IFG+   + +H +L +I + ++
Sbjct: 926  LPQILSCMLKAFSLDNTSSRSVSYKVLQSFVIFGSNIEEYMHLVLPVIIRSFE 978

>T1RK_ECOLI (P08956) Type I restriction enzyme EcoKI R protein (EC 3.1.21.3)|
           (R.EcoKI)
          Length = 1188

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +2

Query: 95  WTPTATNER---PWCYTSR*KNLSVHMTTYAQVWNHSIRDT 208
           W  T+  +R   P+CY++  +     M T + +W   +RDT
Sbjct: 381 WQDTSGKQRFKIPFCYSTNGREYRATMKTKSGIWYRDVRDT 421

>XYNA_THESA (P36917) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A)
          Length = 1157

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 473 LVRSSKISQEIPS*PSLQNSKQGLWNNIDPVGPRIW 366
           L +S++I+  I   P +      +WNN++P+    W
Sbjct: 853 LSKSAQIATAIYGTPVIDGKVDDIWNNVEPISTNTW 888

>SMRCD_HUMAN (Q9H4L7) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A containing DEAD/H box
           1 (EC 3.6.1.-) (ATP-dependent helicase 1) (hHEL1)
          Length = 1026

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = +1

Query: 181 SLEPLYSRHIVKDVTSTSVTSPINCLFVRSTRHQPLDNLDIWHCK--------VVQLKSS 336
           +L P  S+   + +T     +    LF + ++   L    IWHCK        V++L + 
Sbjct: 402 TLIPQCSQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNK 461

Query: 337 CRRFSLKAAFQIRGPTGS 390
           C   S K   Q+   TG+
Sbjct: 462 CEDISNKLTKQVTMLTGN 479


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,876,262
Number of Sequences: 219361
Number of extensions: 1577702
Number of successful extensions: 3889
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3889
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)