Clone Name | rbart40h07 |
---|---|
Clone Library Name | barley_pub |
>HQGT_ARATH (Q9M156) Probable hydroquinone glucosyltransferase (EC 2.4.1.218)| (Arbutin synthase) Length = 480 Score = 31.6 bits (70), Expect = 1.4 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Frame = -2 Query: 452 KHLTDIRDLNFLMCRAIENP----QLTTASALRTSLVSVFEEPATFDVSDLQSKAGVEDY 285 K L + L A E P Q T +L +S+ SVF P D++DL S +E Sbjct: 28 KRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPV--DLTDLSSSTRIESR 85 Query: 284 VCCATVHGIGPSISVFDSIRDGG 216 + VFDS +GG Sbjct: 86 ISLTVTRSNPELRKVFDSFVEGG 108
>APGM_GEOSL (Q74C57) Probable 2,3-bisphosphoglycerate-independent| phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) Length = 399 Score = 31.2 bits (69), Expect = 1.9 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = +1 Query: 250 DGPMPCTVAQQT*SSTPALLCRSDTSKVAGSSNTETSDVRSAEAVVSCGFSMARHM 417 D P P + T + P +L +TS+ AG + + RSA VV GF + M Sbjct: 341 DHPTPLRLKTHTDAPVPFVLFSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMM 396
>MCE1_CANGA (Q6FQ31) mRNA capping enzyme alpha subunit (mRNA| guanylyltransferase) (EC 2.7.7.50) (GTP--RNA guanylyltransferase) (GTase) Length = 449 Score = 30.4 bits (67), Expect = 3.2 Identities = 15/59 (25%), Positives = 27/59 (45%) Frame = -2 Query: 434 RDLNFLMCRAIENPQLTTASALRTSLVSVFEEPATFDVSDLQSKAGVEDYVCCATVHGI 258 +DL L+C+ + +P + S +P +F SD++ K +DY C G+ Sbjct: 20 QDLKMLVCKLLNSP--------KPSKTFPGSQPVSFQHSDIRDKLVAQDYYVCEKTDGL 70
>SYC_BACCR (Q81J59) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 465 Score = 30.0 bits (66), Expect = 4.2 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 10/81 (12%) Frame = -2 Query: 494 KRCHDAYSNAKHNKKHLTDIRDLNFLMCRAIE----------NPQLTTASALRTSLVSVF 345 +R AY N KH + TD+ D N IE N TA+A+ T L +V Sbjct: 317 ERIKTAYGNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAI-TELYNVA 375 Query: 344 EEPATFDVSDLQSKAGVEDYV 282 + + + SK +E YV Sbjct: 376 NHANQYLLEEHTSKVVIEAYV 396
>EMIL1_MOUSE (Q99K41) EMILIN-1 precursor (Elastin microfibril interface-located| protein 1) (Elastin microfibril interfacer 1) Length = 1017 Score = 30.0 bits (66), Expect = 4.2 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +3 Query: 252 RANAVHSGAADIVLHTSL-ALQIRHVEGRRLLEHGDERCPECGG 380 R +A AA+I+L +L A Q+ +EG L GDE C CGG Sbjct: 546 RMDAQEETAAEILLRLNLTAAQLSQLEGL-LQARGDEGCGACGG 588
>PYRC_LACPL (P77884) Dihydroorotase (EC 3.5.2.3) (DHOase)| Length = 430 Score = 30.0 bits (66), Expect = 4.2 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = -2 Query: 416 MCRAIENPQLTTASALRTSLVSVFEEPATFDVSDLQSKAGVEDYVCCATVHGIGPS-ISV 240 M I+N Q+ A L+T+ + + E L + G D+V CA H + P + V Sbjct: 1 MTTLIKNAQVWQAGQLQTTDILIAEGRIKAIGHQLHDQFGPADHVICADQHFVSPGFVDV 60 Query: 239 FDSIRDGG 216 +RD G Sbjct: 61 HVHLRDPG 68
>ACCN3_RAT (O35240) Amiloride-sensitive cation channel 3 (Acid-sensing ion| channel 3) (ASIC3) (Dorsal root ASIC) (DRASIC) Length = 533 Score = 29.6 bits (65), Expect = 5.5 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +1 Query: 22 WQRRGWSFRSSLRVVQGRLHALFTHVISSSLGLLP---SCKIIFTLSSTSCICLL 177 W RR RS ++Q L+ THV SLG P C + TLS++ C L Sbjct: 475 WNRRSAQKRSGNTLLQEELNGHRTHVPHLSLGPRPPTTPCAVTKTLSASHRTCYL 529
>NBEA_DROME (Q9W4E2) Protein neurobeachin (Protein rugose) (A-kinase anchor| protein 550) (AKAP 550) (dAKAP550) Length = 3584 Score = 29.6 bits (65), Expect = 5.5 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = -1 Query: 474 QQRQAQQEAPHRHP-RPQLPHVSGHRE 397 QQ+Q QQ+ PH HP +P ++GH++ Sbjct: 2115 QQQQQQQQQPHYHPHQPHYGLINGHQQ 2141
>VMAT2_HUMAN (Q05940) Synaptic vesicular amine transporter (Monoamine| transporter) (Vesicular amine transporter 2) (VAT2) (Solute carrier family 18 member 2) Length = 514 Score = 29.6 bits (65), Expect = 5.5 Identities = 15/66 (22%), Positives = 27/66 (40%) Frame = +3 Query: 99 HQFITWVAPFV*NHLHLVKHLMYLSPGMQRRGVHARAIQPAIPDRVEYTDRRANAVHSGA 278 + +T V P + ++L+ +KH + R VH +I + Y D + Sbjct: 34 NMLLTVVVPIIPSYLYSIKHEKNATEIQTARPVHTASISDSFQSIFSYYDNSTMVTGNAT 93 Query: 279 ADIVLH 296 D+ LH Sbjct: 94 RDLTLH 99
>ZAN_HUMAN (Q9Y493) Zonadhesin precursor| Length = 2812 Score = 29.6 bits (65), Expect = 5.5 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%) Frame = -3 Query: 265 TALARR-SVYSTLSGMAG----WIARACTPLRCIPGDRYMRC 155 TAL R Y++L AG W R P+RC PG Y C Sbjct: 1780 TALCRSLQAYASLCAQAGQAPAWRNRTFCPMRCPPGSSYSPC 1821
>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 4391 Score = 29.3 bits (64), Expect = 7.2 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Frame = +1 Query: 13 SVIWQRRGWSFRSSLRVVQGRLHALFTHVISSSLGLLPSCKIIFTLSSTSCICLLECSGE 192 ++ W +RG S S ++V RL V + G C + S ++ G Sbjct: 2564 TITWYKRGGSLPSRHQIVGSRLR--IPQVTPADSGEY-VCHVSNGAGSRETSLIVTIQGS 2620 Query: 193 GYMHAQS-NPPSLIESN--TLIDG---PMPCTVAQQ 282 G H S +PP IES+ T+++G + C VA+Q Sbjct: 2621 GSSHVPSVSPPIRIESSSPTVVEGQTLDLNCVVARQ 2656
>FLII_HUMAN (Q13045) Protein flightless-1 homolog| Length = 1269 Score = 29.3 bits (64), Expect = 7.2 Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Frame = +1 Query: 118 LLPSCKIIFTLSSTSCICLLECSGEGYMHAQSNPPSLIESNTLIDGPMPCTVAQQT*SST 297 L+P +++ +L T C+ +L+C + ++ P L+ + L G C + + +T Sbjct: 759 LMPRMRLLQSLLDTRCVYILDCWSDVFIWLGRKSPRLVRAAALKLGQELCGMLHRPRHAT 818 Query: 298 PALLCRSDTSKVAGSSNTETSDV------RSAEAVV 387 + ++V + DV R+AEAV+ Sbjct: 819 VSRSLEGTEAQVFKAKFKNWDDVLTVDYTRNAEAVL 854
>EMIL1_HUMAN (Q9Y6C2) EMILIN-1 precursor (Elastin microfibril interface-located| protein 1) (Elastin microfibril interfacer 1) Length = 1016 Score = 29.3 bits (64), Expect = 7.2 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +3 Query: 252 RANAVHSGAADIVLHTSL-ALQIRHVEGRRLLEHGDERCPECGG 380 R +A AA+ L +L A ++ +EG L HGDE C CGG Sbjct: 545 RVDAQDETAAEFTLRLNLTAARLGQLEGL-LQAHGDEGCGACGG 587
>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)| Length = 320 Score = 28.9 bits (63), Expect = 9.3 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -1 Query: 432 RPQLPHVSGHREPAADY 382 +PQLPH G REP A Y Sbjct: 57 QPQLPHAGGGREPPASY 73
>BUR1_CANAL (Q9Y7W4) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 746 Score = 28.9 bits (63), Expect = 9.3 Identities = 17/65 (26%), Positives = 31/65 (47%) Frame = +1 Query: 16 VIWQRRGWSFRSSLRVVQGRLHALFTHVISSSLGLLPSCKIIFTLSSTSCICLLECSGEG 195 +I++ S R+ + ++G + + ++ S +GLL + KI L CI G Sbjct: 109 MIFEEPKMSNRTDIITMRGSFYTVTPYMSSDLVGLLENPKIKLELGQIKCIMQQLLKGIQ 168 Query: 196 YMHAQ 210 Y+H Q Sbjct: 169 YVHNQ 173 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,777,417 Number of Sequences: 219361 Number of extensions: 1717484 Number of successful extensions: 5421 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 5122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5402 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)