ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart40g11 |
|---|---|
| Clone Library Name | barley_pub |
>COL13_CAEEL (P20631) Cuticle collagen 13 precursor| Length = 316 Score = 42.7 bits (99), Expect = 5e-04 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 4/100 (4%) Frame = -2 Query: 460 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPE--- 290 +P + + G PG+PG V +P P G S P G P G G +QP P P+ Sbjct: 219 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAG-APGQPGQAGSSQPGGPGPQGDA 277 Query: 289 -AAGSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 A G+ G GQ A G++ GS+ D+ P AP Sbjct: 278 GAPGAPGAPGQAGAPGQDGES---GSEGACDHCPPPRTAP 314 Score = 33.5 bits (75), Expect = 0.33 Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 3/102 (2%) Frame = -2 Query: 469 ASDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPF--GQEPESNGNTGVAQPALPL 296 A P + +PG PG P +P +G++ P GQ + G G A P Sbjct: 192 APGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPP-GS 250 Query: 295 PEAAGSGGVAGQGHAVEDVGQ-TIGFGSQPLVDNSPYDSGAP 173 P AG+ G GQ + + G G P +P +GAP Sbjct: 251 PGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAP 292
>COL12_CAEEL (P20630) Cuticle collagen 12 precursor| Length = 316 Score = 42.7 bits (99), Expect = 5e-04 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 4/100 (4%) Frame = -2 Query: 460 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPE--- 290 +P + + G PG+PG V +P P G S P G P G G +QP P P+ Sbjct: 219 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAG-APGQPGQAGSSQPGGPGPQGDA 277 Query: 289 -AAGSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 A G+ G GQ A G++ GS+ D+ P AP Sbjct: 278 GAPGAPGAPGQAGAPGQDGES---GSEGACDHCPPPRTAP 314 Score = 33.5 bits (75), Expect = 0.33 Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 3/102 (2%) Frame = -2 Query: 469 ASDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPF--GQEPESNGNTGVAQPALPL 296 A P + +PG PG P +P +G++ P GQ + G G A P Sbjct: 192 APGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPP-GS 250 Query: 295 PEAAGSGGVAGQGHAVEDVGQ-TIGFGSQPLVDNSPYDSGAP 173 P AG+ G GQ + + G G P +P +GAP Sbjct: 251 PGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAP 292
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 35.0 bits (79), Expect = 0.11 Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Frame = -2 Query: 430 PGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEA----AGSGGVAG 263 PG+P A P P G N PF S GN G+A+P+ P P+ G GG G Sbjct: 202 PGAP----AQRPGGRPGGPRPGNNPF----TSGGNAGMARPSAPRPQGGPRPGGPGGAPG 253 Query: 262 QGHAVEDVGQTIGFGSQPLV--DNSPYDSGAPK 170 G + G G G +P N P P+ Sbjct: 254 GGPRPQGPGGQ-GGGPRPQAPGGNRPSPGSMPR 285
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 34.7 bits (78), Expect = 0.15 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = -2 Query: 436 GMPGSPGLVSAM--PPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALP-LPEAAGSGGVA 266 G+PG PGL A P A P G G+ P G+ S + + P LP LP G+ G+ Sbjct: 730 GLPGKPGLPGAKGEPAVAMPGGPGTPGFP-GERGNSGEHGEIGLPGLPGLPGTPGNEGLD 788 Query: 265 G 263 G Sbjct: 789 G 789
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 34.7 bits (78), Expect = 0.15 Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 10/96 (10%) Frame = -2 Query: 430 PGSPGLVS---AMPPFAEPVGHGSSNLPFGQEPES----NGNTGVAQPALPLPEAAGSGG 272 PG P VS PP PV S+ PFG P + G + QP P + GG Sbjct: 98 PGGPPQVSQPGGFPPVGRPVAPPSNQPPFGGRPSTGPLVGGGSSFPQPG-GFPASGPPGG 156 Query: 271 VAGQGHAVEDVGQTIGFGSQPLVD---NSPYDSGAP 173 V + IGFGS P + + P SG P Sbjct: 157 VPS---GPPSGARPIGFGSPPPMGPGMSMPPPSGMP 189
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 34.3 bits (77), Expect = 0.19 Identities = 39/105 (37%), Positives = 43/105 (40%), Gaps = 5/105 (4%) Frame = -2 Query: 466 SDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEA 287 S +P A G PG PG+ A EP G S LP G +G P +P Sbjct: 204 SGQPGVAGENGHPGMPGMDGAN---GEPGASGESGLP--------GPSGFPGPR-GMPGT 251 Query: 286 AGSGGVAGQGHAVEDVGQT--IGFGSQPLVDNS---PYDSGAPKH 167 AGS G AG A D G T G P V S P D GAP H Sbjct: 252 AGSPGQAG---AKGDGGPTGEQGRPGAPGVKGSSGPPGDVGAPGH 293
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 33.9 bits (76), Expect = 0.25 Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-----EPESNGNTGVAQPALPLPEAAGSGG 272 G+PG+PGL+ A P P G++ +P GQ EP NG G P E AGS G Sbjct: 246 GIPGAPGLIGARGPPGPP---GTNGVP-GQRGAAGEPGKNGAKGDPGPRGERGE-AGSPG 300 Query: 271 VAG 263 +AG Sbjct: 301 IAG 303 Score = 32.7 bits (73), Expect = 0.56 Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ--EPESNGNTGVAQPALPLPEAAGSGGVAG 263 G PGSPG + P P GSS P GQ EP G+ G P P P + GS G G Sbjct: 186 GFPGSPGAKGEVGPAGSP---GSSGAP-GQRGEPGPQGHAGAPGPPGP-PGSDGSPGGKG 240 Query: 262 Q 260 + Sbjct: 241 E 241 Score = 30.8 bits (68), Expect = 2.1 Identities = 27/96 (28%), Positives = 37/96 (38%) Frame = -2 Query: 460 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAG 281 EP H G PG PG PP ++ G + P + G G P P G Sbjct: 214 EPGPQGHAGAPGPPG-----PPGSDGSPGGKGEMGPAGIPGAPGLIGARGP----PGPPG 264 Query: 280 SGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 + GV GQ A + G+ G P ++G+P Sbjct: 265 TNGVPGQRGAAGEPGKN-GAKGDPGPRGERGEAGSP 299
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 33.5 bits (75), Expect = 0.33 Identities = 22/58 (37%), Positives = 24/58 (41%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAG 263 G+PG PG P EP G L G+ GV QP LP A G GG G Sbjct: 179 GVPGPPGFQGEPGPQGEPGPPGDRGL--------KGDNGVGQPG--LPGAPGQGGAPG 226 Score = 28.9 bits (63), Expect = 8.1 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQG 257 G+PGSPG+ P P G+ P + TG+A L LP G V G+G Sbjct: 510 GVPGSPGITGPPGPPGPPGPPGA--------PGAFDETGIA--GLHLPNGGVEGAVLGKG 559
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 33.5 bits (75), Expect = 0.33 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -2 Query: 289 AAGSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLRIGV-ALGVSSAIV 113 ++G G VA QG +T GFG+ P+ + P G+P G GV A G + A Sbjct: 1948 SSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFG------GVPAFGSAPAFT 2001 Query: 112 MALG 101 LG Sbjct: 2002 SPLG 2005
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 33.5 bits (75), Expect = 0.33 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPESNGNTGV----AQPALPLPEAAGSGG 272 G PG PG+V P E G P + EP G G+ P LP+P AG+ G Sbjct: 326 GPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGPKGFPGLPGQPGPPGLPVPGQAGAPG 385 Query: 271 VAGQ 260 G+ Sbjct: 386 FPGE 389
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 33.1 bits (74), Expect = 0.43 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALP-LPEAAGSGGVAGQ 260 G+PG PG+ P P G + + P G+ G+ P +P LP G G G+ Sbjct: 136 GLPGPPGMPGFPGPPGVPGMKGEPAIGYAGAPGEKGDAGM--PGMPGLPGPPGRDGFPGE 193 Query: 259 GHAVEDVGQ 233 DVGQ Sbjct: 194 KGDRGDVGQ 202 Score = 31.6 bits (70), Expect = 1.2 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 11/69 (15%) Frame = -2 Query: 436 GMPGSPGLVSA--MPPFAEPVGH-GSSNLPF--GQE-----PESNGNTGVAQPALP-LPE 290 G+PG PG+V A +P P G G + LP G++ P G G QP +P LP Sbjct: 636 GLPGKPGIVGAPGLPGPPGPKGEPGLTGLPEKPGKDGIPGLPGLKGEPGYGQPGMPGLPG 695 Query: 289 AAGSGGVAG 263 G G+ G Sbjct: 696 MKGDAGLPG 704 Score = 29.6 bits (65), Expect = 4.7 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 2/90 (2%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEA-AGSGGVAG- 263 G+PG PGL A+ P PV P G G+ P LP P+ AG G G Sbjct: 701 GLPGLPGLPGAVGPMGPPVPESQ------LRPGPPGKDGL--PGLPGPKGEAGFPGAPGL 752 Query: 262 QGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 QG A G P + +P GAP Sbjct: 753 QGPA--------GLPGLPGMKGNPGLPGAP 774
>NFKB2_MOUSE (Q9WTK5) Nuclear factor NF-kappa-B p100 subunit (DNA-binding factor| KBF2) [Contains: Nuclear factor NF-kappa-B p52 subunit] Length = 899 Score = 33.1 bits (74), Expect = 0.43 Identities = 27/82 (32%), Positives = 33/82 (40%) Frame = -2 Query: 406 AMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHAVEDVGQTI 227 A+P F++P G GS GSGG AG G+ G ++ Sbjct: 342 ALPTFSQPFGGGSH------------------------MGGGSGGSAG-GYGGAGGGGSL 376 Query: 226 GFGSQPLVDNSPYDSGAPKHGC 161 GF S L N PY SGA GC Sbjct: 377 GFFSSSLAYN-PYQSGAAPMGC 397
>LIRB2_HUMAN (Q8N423) Leukocyte immunoglobulin-like receptor subfamily B member| 2 precursor (Leukocyte immunoglobulin-like receptor 2) (LIR-2) (Immunoglobulin-like transcript 4) (ILT-4) (Monocyte/macrophage immunoglobulin-like receptor 10) (MIR-10) (CD85d Length = 598 Score = 33.1 bits (74), Expect = 0.43 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 29/93 (31%) Frame = +3 Query: 297 SGRAGC-----------ATPVLPLLSGSCPK--------------GRLLLPCPTGSAKGG 401 +GR GC + P++ +++G+ PK GR+ L C + A GG Sbjct: 93 TGRYGCQYYSRARWSELSDPLVLVMTGAYPKPTLSAQPSPVVTSGGRVTLQCESQVAFGG 152 Query: 402 IAETKPGEPGIPQCC----AARGSSLAFHASSP 488 K GE PQC ARGSS A + P Sbjct: 153 FILCKEGEDEHPQCLNSQPHARGSSRAIFSVGP 185
>PRLR_PIG (Q6JTA8) Prolactin receptor precursor (PRL-R)| Length = 625 Score = 32.7 bits (73), Expect = 0.56 Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Frame = +3 Query: 297 SGRAGCATPVLPLLSGSCPKGRLLLP---CPTGSAKGGIAETKPGEPGIPQCCAARGSSL 467 SGR C +P LLS C + R P P G K G ET P PQ + L Sbjct: 349 SGRGSCDSP--SLLSEKCDEPRANPPKFHTPEGIEKPGDPETNLPRPQDPQSTSVESKLL 406 Query: 468 AFHA 479 FHA Sbjct: 407 YFHA 410
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 32.7 bits (73), Expect = 0.56 Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 2/109 (1%) Frame = -2 Query: 493 KGGELAWKASDEPRAAQHCGMPGS--PGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTG 320 +GG++ + +D G+ PG A P A P G N PF S G+TG Sbjct: 172 QGGQVRGERTDRGDRGDRGDRQGAARPG-GQAPRPGARPAGPRPGNNPF----TSGGSTG 226 Query: 319 VAQPALPLPEAAGSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 +A+P P P A G AG G G Q D +P G P Sbjct: 227 MARPQAPRPGGAPRPGGAGAPGGPRPQGA----GGQ---DRAPRPQGGP 268
>GYRB_ACIJU (Q44080) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 388 Score = 32.7 bits (73), Expect = 0.56 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +2 Query: 341 WFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 + L Q A S+ ++ + RD ARRA T + A + GLP KLA Sbjct: 254 YLLENPQAAKSIAGKIIDAARARDAARRAREMTRRKSALDIAGLPGKLA 302
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 32.7 bits (73), Expect = 0.56 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 5/78 (6%) Frame = -2 Query: 442 HCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ----EPESNGNTGVAQPALPLPEAAGSG 275 H GMPG PG+ A + G S P + +P +NG+ G P P E G Sbjct: 252 HPGMPGMPGMKGARGFDGKDGAKGDSGAPGPKGEAGQPGANGSPGQPGPGGPTGERGRPG 311 Query: 274 GVAGQG-HAVEDVGQTIG 224 G G H + T G Sbjct: 312 NPGGPGAHGKDGAPGTAG 329 Score = 29.3 bits (64), Expect = 6.2 Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 8/95 (8%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ----EPESNGNTGVAQPALPLPEAAGSGGV 269 G PG PG P G G++ P + P +NG+ G + P +P G G Sbjct: 848 GAPGPPGPQGVKGERGSPGGPGAAGFPGARGPPGPPGNNGDRGESGPP-GVPGPPGHPGP 906 Query: 268 AGQGHAVEDVGQTIGF----GSQPLVDNSPYDSGA 176 AG A G+ GF G Q + SP SGA Sbjct: 907 AGNNGAPGKAGER-GFQGPLGPQGAI-GSPGASGA 939
>KCD12_MOUSE (Q6WVG3) Potassium channel tetramerisation domain-containing| protein 12 (Pfetin) (Predominantly fetal expressed T1 domain) Length = 327 Score = 32.3 bits (72), Expect = 0.73 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 8/73 (10%) Frame = -2 Query: 457 PRAAQHCGMPGSPGLVSAMPPFAEPVGH-----GSSNLPFGQ---EPESNGNTGVAQPAL 302 P + G P PG PP + H G LP G EP+ + G P L Sbjct: 123 PELVRRLGAPQQPG-PGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTL 181 Query: 301 PLPEAAGSGGVAG 263 L + SGG AG Sbjct: 182 ELASRSPSGGAAG 194
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 32.3 bits (72), Expect = 0.73 Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALP-LPEAAGSGGVAG 263 G PG PG P EP G L G+ GV QP LP P AG+ G G Sbjct: 175 GAPGPPGFRGEPGPQGEPGPRGDRGL--------KGDNGVGQPGLPGAPGQAGAPGPPG 225 Score = 29.6 bits (65), Expect = 4.7 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQG 257 G+PGSPGL P P G+ P + TG+A L LP G V G+G Sbjct: 506 GVPGSPGLTGPPGPPGPPGPPGA--------PGALDETGIA--GLHLPNGGVEGAVLGKG 555
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 32.3 bits (72), Expect = 0.73 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = -2 Query: 493 KGGELAWKASDEPRAAQHCGMPGSPGLVSAMPPFAEP-VGHGSSNLPFGQEPESNGNTGV 317 K G++A K R A H +P PG + + PP A P + GS P G ++G Sbjct: 1814 KVGDIARKTD---RPALHLRIPPQPGALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKP 1870 Query: 316 AQPALPLPEAAG 281 ++P P++ G Sbjct: 1871 PAGSVPGPDSPG 1882
>COL40_CAEEL (P34804) Cuticle collagen 40| Length = 306 Score = 32.3 bits (72), Expect = 0.73 Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 2/90 (2%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESN-GNTGVAQPALPLPEA-AGSGGVAG 263 G PG+PG V+ P P G P G P N G+ G ++P P AG G G Sbjct: 217 GNPGAPGQVTETPGTPGPAGAAGPPGPPG--PAGNPGSAGASEPGPAGPAGDAGPDGAPG 274 Query: 262 QGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 A G+ GS D+ P AP Sbjct: 275 NAGAPGAPGEAGAPGSGGGCDHCPPPRTAP 304
>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor| Length = 680 Score = 32.3 bits (72), Expect = 0.73 Identities = 27/88 (30%), Positives = 38/88 (43%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQG 257 G+PGSPG + P P HG P + G G+ PA P P A G+ G G Sbjct: 335 GLPGSPGNMGPQGPKGIPGNHGI--------PGAKGEIGLVGPAGP-PGARGARGPPGLD 385 Query: 256 HAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 G+T G+ +P ++ + G P Sbjct: 386 ------GKT-GYPGEPGLNGPKGNPGLP 406
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 32.3 bits (72), Expect = 0.73 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPESNGNTGVAQPALPL--PEAAGSGGVA 266 G G PGL+ + P E G LP Q P + G+ G+ PA P+ P G G A Sbjct: 1448 GEKGHPGLIGLIGPPGEQGEKGDRGLPGSQGSPGAKGDGGIPGPAGPIGPPGPPGLPGPA 1507 Query: 265 G 263 G Sbjct: 1508 G 1508
>COL14_CAEEL (P18834) Cuticle collagen 14| Length = 345 Score = 32.3 bits (72), Expect = 0.73 Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 2/90 (2%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ--EPESNGNTGVAQPALPLPEAAGSGGVAG 263 G+PG+PG P EP + + P G+ P G G PA P P G GG G Sbjct: 243 GIPGAPGQPGRPGPPGEPGTYKTEVGPAGRAGAPGRPGPPGQPGPAGP-PGENGKGGGQG 301 Query: 262 QGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 GQ G P P D+GAP Sbjct: 302 PSGLPGPPGQP-GQNGAPGEVGQPGDNGAP 330
>GYRB_ACIGB (Q44274) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 389 Score = 32.0 bits (71), Expect = 0.95 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 329 AVAFWFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 A + + L Q A S+ ++ + RD AR+A T + A + GLP KLA Sbjct: 250 AFSEYLLENPQAAKSIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKLA 302
>CAPP_PHOLL (Q7MAX5) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 878 Score = 32.0 bits (71), Expect = 0.95 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 5/53 (9%) Frame = +3 Query: 342 GSCPKGRLLLPCPTGSAKGGIAETKPGEP-----GIPQCCAARGSSLAFHASS 485 G P LL P GS KGG+ T+ GE G+PQ SSLA +AS+ Sbjct: 587 GGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPQVTI---SSLALYASA 636
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 32.0 bits (71), Expect = 0.95 Identities = 25/70 (35%), Positives = 30/70 (42%) Frame = -2 Query: 469 ASDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPE 290 A+ P +A G PG G P EP G P G +P S+G GV PA P P Sbjct: 904 ATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPG-PRG-DPGSHGRVGVRGPAGP-PG 960 Query: 289 AAGSGGVAGQ 260 G G G+ Sbjct: 961 GPGDKGDPGE 970 Score = 29.3 bits (64), Expect = 6.2 Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 7/65 (10%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPES-----NGNTGVAQPALPLPE--AAGS 278 G+PG PG P EP HG P G E G+ G P P+ E A G+ Sbjct: 465 GLPGDPGFKGEAGPKGEPGPHGIQG-PIGPPGEEGKRGPRGDPGTLGPPGPVGERGAPGN 523 Query: 277 GGVAG 263 G G Sbjct: 524 RGFPG 528
>SM41_HEMPU (Q26264) 41 kDa spicule matrix protein precursor (HSM41) (HPSMC)| Length = 407 Score = 32.0 bits (71), Expect = 0.95 Identities = 24/79 (30%), Positives = 29/79 (36%) Frame = -2 Query: 445 QHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVA 266 Q G PG+ P F G G FG +P G QP G G Sbjct: 217 QQPGFGNQPGMGGRQPGFGNQPGMGGRQPGFGNQPGMGGR----QPGFGNQPGVG-GRQP 271 Query: 265 GQGHAVEDVGQTIGFGSQP 209 G G+ G+ GFG+QP Sbjct: 272 GFGNQPGMGGRQPGFGNQP 290 Score = 30.8 bits (68), Expect = 2.1 Identities = 26/99 (26%), Positives = 35/99 (35%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQG 257 G PG+ P F G G FG +P G P G+ GQ Sbjct: 259 GFGNQPGVGGRQPGFGNQPGMGGRQPGFGNQPGVGGRQ---------PGFGNQPGMGGQQ 309 Query: 256 HAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLRIGV 140 V G+ GFG+QP + + G + G + GV Sbjct: 310 PGVG--GRQPGFGNQPGMGGNQPGMGGQQPGMGGRQPGV 346 Score = 30.0 bits (66), Expect = 3.6 Identities = 24/68 (35%), Positives = 30/68 (44%) Frame = -2 Query: 412 VSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHAVEDVGQ 233 V+AM F V G N+P GQ+P G QP G G G G+ G+ Sbjct: 186 VTAMRAFVCEVPAGR-NVPIGQQPGMGQGFGNQQPGFGNQPGMG-GRQPGFGNQPGMGGR 243 Query: 232 TIGFGSQP 209 GFG+QP Sbjct: 244 QPGFGNQP 251
>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1904 Score = 32.0 bits (71), Expect = 0.95 Identities = 23/78 (29%), Positives = 32/78 (41%) Frame = -2 Query: 400 PPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHAVEDVGQTIGF 221 PPF+ P GH S+ ++ +PALP P + S G G G + +G Sbjct: 88 PPFSSPNGHNHSHHNTSTSSANHSLQSPPRPALPNPYMSSSTGAPG-GPVAPALPPPVGI 146 Query: 220 GSQPLVDNSPYDSGAPKH 167 S +SP S A H Sbjct: 147 NS----SSSPGSSAAGLH 160
>MBN_DROME (P52302) Protein lethal(3)malignant blood neoplasm 1 (Mbn(83))| Length = 653 Score = 32.0 bits (71), Expect = 0.95 Identities = 34/103 (33%), Positives = 41/103 (39%) Frame = -2 Query: 424 SPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHAVE 245 +P L SA P V ++N P G P SNG A A P+A GSGG+ G G Sbjct: 399 TPLLSSATAPGISGV---TANTPTGNVP-SNGGGIAAGKAPGNPQAGGSGGIIGAGAPGG 454 Query: 244 DVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLRIGVALGVSSAI 116 G GS + G G G A+G SAI Sbjct: 455 RKVSAGGIGSGSAI-------GGVSGGSKASGNGGAIGSGSAI 490
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 32.0 bits (71), Expect = 0.95 Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 5/72 (6%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLP-FGQEPESNGNTGV----AQPALPLPEAAGSGG 272 G+PG PG V P E G P EP G G P P P AG+ G Sbjct: 326 GLPGPPGTVIGTMPLGEKGDRGYPGAPGLRGEPGPKGFPGTPGQPGPPGFPTPGQAGAPG 385 Query: 271 VAGQGHAVEDVG 236 G+ D G Sbjct: 386 FPGERGEKGDQG 397
>GYRB_ACIJO (Q44081) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 389 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +2 Query: 341 WFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 + L Q A S+ ++ + RD AR+A T + A + GLP KLA Sbjct: 254 YLLENPQAAKSIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKLA 302
>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 482 Score = 31.6 bits (70), Expect = 1.2 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPESNGNTGVAQPALPL--PEAAGSGGVA 266 G G PGL+ + P E G LP Q P + G+ G+ PA P+ P G G A Sbjct: 126 GEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPIGPPGPPGLPGPA 185 Query: 265 G 263 G Sbjct: 186 G 186
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 31.6 bits (70), Expect = 1.2 Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 16/85 (18%) Frame = -2 Query: 469 ASDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGS-----SNLPFGQEPE----------- 338 A+ P A G PG PG V P P GS + P G+ E Sbjct: 776 ATGFPGPAGRAGAPGPPGNVGPSGPTGHPGKDGSRGPRGDSGPVGRPGEQGQHGPVGLAG 835 Query: 337 SNGNTGVAQPALPLPEAAGSGGVAG 263 G +G A PA P P AAG GV G Sbjct: 836 DKGPSGEAGPAGP-PGAAGPSGVLG 859
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 31.6 bits (70), Expect = 1.2 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Frame = -2 Query: 451 AAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGN-TGVAQPALPLPEAAGSG 275 A++H G S P GHG GQ P S + TG + + P +GSG Sbjct: 406 ASRHSSGRGQHSSGSGQSP-----GHGQRGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSG 460 Query: 274 GVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHG 164 +G GH + G+ S + SG +HG Sbjct: 461 YSSGFGHHESSSEHSSGYTQHG--SGSGHSSGHGQHG 495 Score = 30.0 bits (66), Expect = 3.6 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Frame = -2 Query: 388 EPVGHGSSNLPFGQEPE-SNGN--TGVAQPALPLPEAAGSGGVAGQGHAVEDVGQTIGFG 218 + +GHG GQ P S G +G Q + P +GSG + +G G + G G Sbjct: 2402 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLG 2461 Query: 217 SQPLVDNSPYDSGAPKHGCS 158 + S SG +HG S Sbjct: 2462 HRE--SRSGQSSGYGQHGSS 2479 Score = 29.3 bits (64), Expect = 6.2 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Frame = -2 Query: 388 EPVGHGSSNLPFGQEPE-SNGN--TGVAQPALPLPEAAGSGGVAGQGHAVEDVGQTIGFG 218 + +GHG GQ P S G +G Q + P +GSG + +G G + G G Sbjct: 1932 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESGSGHSSGLG 1991 Query: 217 SQPLVDNSPYDSGAPKHGCS 158 + S SG +HG S Sbjct: 1992 HRE--SRSGQSSGYGQHGSS 2009 Score = 28.9 bits (63), Expect = 8.1 Identities = 21/72 (29%), Positives = 31/72 (43%) Frame = -2 Query: 379 GHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHAVEDVGQTIGFGSQPLVD 200 G SS P+G + + G P +GSG +G GH GQ+ G+G Sbjct: 2429 GQSSSYSPYGSGSGWSSSRG--------PYESGSGHSSGLGHRESRSGQSSGYGQHG--S 2478 Query: 199 NSPYDSGAPKHG 164 +S + S +HG Sbjct: 2479 SSGHSSTHGQHG 2490 Score = 28.9 bits (63), Expect = 8.1 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 1/76 (1%) Frame = -2 Query: 388 EPVGHGSSNLPFGQEPES-NGNTGVAQPALPLPEAAGSGGVAGQGHAVEDVGQTIGFGSQ 212 + +GHG Q P +G + +GS +GH GQT GFG Sbjct: 292 QSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQTSGFGQH 351 Query: 211 PLVDNSPYDSGAPKHG 164 S SG KHG Sbjct: 352 E--SGSGQSSGYSKHG 365
>SCRT1_HUMAN (Q9BWW7) Transcriptional repressor scratch 1 (Scratch homolog 1| zinc finger protein) (Scratch 1) (SCRT) (hScrt) Length = 348 Score = 31.6 bits (70), Expect = 1.2 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 3/83 (3%) Frame = -2 Query: 454 RAAQHCGMPGSPGLVSAMPPFAEPVGHGSSN-LPFGQEPESNGNT--GVAQPALPLPEAA 284 R A + G +P SA P + G G + G P G T G A P AA Sbjct: 126 RKASNAGSAAAPSTASAAAPDGDAGGGGGAGGRSLGSGPGGRGGTRAGAGTEARAGPGAA 185 Query: 283 GSGGVAGQGHAVEDVGQTIGFGS 215 G+GG HA + G+T S Sbjct: 186 GAGG----RHACGECGKTYATSS 204
>GYRB_ACIHA (Q44065) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 388 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +2 Query: 341 WFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 + L Q A S+ ++ + RD AR+A T + A + GLP KLA Sbjct: 254 YLLENPQAAKSIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKLA 302
>GYRB_ACIG6 (Q44271) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 388 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +2 Query: 341 WFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 + L Q A S+ ++ + RD AR+A T + A + GLP KLA Sbjct: 254 YLLENPQAAKSIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKLA 302
>GYRB_ACIG3 (Q44270) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 388 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +2 Query: 341 WFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 + L Q A S+ ++ + RD AR+A T + A + GLP KLA Sbjct: 254 YLLENPQAAKSIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKLA 302
>GYRB_ACICA (Q43947) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 388 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +2 Query: 341 WFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 + L Q A S+ ++ + RD AR+A T + A + GLP KLA Sbjct: 254 YLLENPQAAKSIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKLA 302
>GYRB_ACIBA (Q43907) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 388 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +2 Query: 341 WFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 + L Q A S+ ++ + RD AR+A T + A + GLP KLA Sbjct: 254 YLLENPQAAKSIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKLA 302
>YRF2_CAEEL (Q09578) Putative cuticle collagen K03H9.2| Length = 285 Score = 31.6 bits (70), Expect = 1.2 Identities = 25/88 (28%), Positives = 36/88 (40%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQG 257 GMPGSPG+ +P G P+G + +S G G+ P +P G GV G Sbjct: 105 GMPGSPGIPGELPNILYQQVFGCRICPYGPKGKS-GYKGIDGPP-GIPGWPGEPGVRGMN 162 Query: 256 HAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 G +D +P + G+P Sbjct: 163 GERGSTG----------LDGAPGEPGSP 180
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 31.6 bits (70), Expect = 1.2 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 6/74 (8%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPESNGNTGVAQPALPL-----PEAAGSG 275 G G PGL+ + P E G LP Q P + G+ G+ PA PL P G Sbjct: 1450 GEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQ 1509 Query: 274 GVAGQGHAVEDVGQ 233 G G + GQ Sbjct: 1510 GPKGNKGSTGPAGQ 1523
>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor| Length = 1691 Score = 31.6 bits (70), Expect = 1.2 Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 6/102 (5%) Frame = -2 Query: 460 EPRAAQHCGMPGSPGLV--SAMPPFAEPVGHGSSNLP-FGQEPESNGNTG-VAQPALPLP 293 +P ++ G PGSPGLV +P F P G LP F P +G G + P LP Sbjct: 689 QPGSSGSKGEPGSPGLVHLPELPGFPGP--RGEKGLPGFPGLPGKDGLPGMIGSPGLP-- 744 Query: 292 EAAGSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPY--DSGAP 173 GS G G E+ G G Q L + + DSG P Sbjct: 745 ---GSKGATGDIFGAEN-GAPGEQGLQGLTGHKGFLGDSGLP 782 Score = 29.6 bits (65), Expect = 4.7 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPE-SNGNTG-VAQPALP-LPEAAGSGGVA 266 G+PG+PGLV P G + LP P+ G+ G V P +P LP +G+ G+ Sbjct: 867 GLPGNPGLVGLK---GSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGISGTRGLK 923 Query: 265 G 263 G Sbjct: 924 G 924 Score = 29.6 bits (65), Expect = 4.7 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLP-FGQEPESNGNTGV-AQPALP----LPEAAGSG 275 G+PG+PG + EP G +LP P G G+ P LP LP GS Sbjct: 682 GLPGTPGQPGSSGSKGEPGSPGLVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMIGSP 741 Query: 274 GVAGQGHAVEDV 239 G+ G A D+ Sbjct: 742 GLPGSKGATGDI 753
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 31.2 bits (69), Expect = 1.6 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ--EPESNGNTGVAQPALPLPEAAGSGGVAG 263 G PGSPG + P P +GS GQ EP G+ G P P GG Sbjct: 341 GFPGSPGAKGEVGPAGSPGSNGSP----GQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGE 396 Query: 262 QGHA 251 G A Sbjct: 397 MGPA 400 Score = 29.3 bits (64), Expect = 6.2 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ----EPESNGNTGVAQPALPLPEAAGSGGV 269 G+PG+PGL+ A P P G++ +P + EP NG G P A G G Sbjct: 401 GIPGAPGLIGARGP---PGPAGTNGIPGTRGPSGEPGKNGAKGE-------PGARGERGE 450 Query: 268 AG 263 AG Sbjct: 451 AG 452
>NFKB2_HUMAN (Q00653) Nuclear factor NF-kappa-B p100 subunit (DNA-binding factor| KBF2) (H2TF1) (Lymphocyte translocation chromosome 10) (Oncogene Lyt-10) (Lyt10) [Contains: Nuclear factor NF-kappa-B p52 subunit] Length = 899 Score = 31.2 bits (69), Expect = 1.6 Identities = 26/82 (31%), Positives = 32/82 (39%) Frame = -2 Query: 406 AMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHAVEDVGQTI 227 A+P F++P G GS GSGG AG G+ G ++ Sbjct: 342 ALPTFSQPFGGGSHM------------------------GGGSGGAAG-GYGGAGGGGSL 376 Query: 226 GFGSQPLVDNSPYDSGAPKHGC 161 GF L SPY SGA GC Sbjct: 377 GFFPSSLA-YSPYQSGAGPMGC 397
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 31.2 bits (69), Expect = 1.6 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ--EPESNGNTGVAQPALPLPEAAGSGGVAG 263 G PGSPG + P P +GS GQ EP G+ G P P GG Sbjct: 341 GFPGSPGAKGEVGPAGSPGSNGSP----GQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGE 396 Query: 262 QGHA 251 G A Sbjct: 397 MGPA 400
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 30.8 bits (68), Expect = 2.1 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEP-----VGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGG 272 G+PGSPGL + P EP G LP G + E G+A + P A G G Sbjct: 2275 GVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLP-GAKGEKGAPGGLAGDLVGEPGAKGDRG 2333 Query: 271 VAG 263 + G Sbjct: 2334 LPG 2336
>RLPA_TREPA (O83958) RlpA-like protein precursor| Length = 318 Score = 30.8 bits (68), Expect = 2.1 Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 20/81 (24%) Frame = -2 Query: 445 QHCGMPGSPGLVSAM---------PPFAEPV-GHGSSNLPFGQE-PESNGNTGVAQP--- 308 + G PG PG+ + PP A G S +P+G P S AQP Sbjct: 173 RRAGTPGVPGVANTTDVPASEYGAPPVAYAAPGSTPSRVPYGTAVPGSAAPNSHAQPVPS 232 Query: 307 ------ALPLPEAAGSGGVAG 263 A PLP AAG G V+G Sbjct: 233 SSSYAAAAPLPYAAGGGKVSG 253
>DPY7_CAEEL (P34688) Cuticle collagen dpy-7 precursor (Protein dumpy-7)| Length = 318 Score = 30.8 bits (68), Expect = 2.1 Identities = 20/58 (34%), Positives = 23/58 (39%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAG 263 G PG PG V P EP G + +S G TG+ P P P G G G Sbjct: 174 GRPGKPGRVGDAGPQGEPGEQGEPGIKGPPGDDSIGGTGIKGPPGP-PGPRGPKGPPG 230
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 30.8 bits (68), Expect = 2.1 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPESNGNTGVAQPALPLPEAAGSGGVAG 263 G+PG+PGL+ A P +G+ L G EP NG G P E AG GV G Sbjct: 402 GIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGE-AGIPGVPG 459 Score = 30.8 bits (68), Expect = 2.1 Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ--EPESNGNTGVAQPALPLPEAAGSGGVAG 263 G PGSPG + P P GS+ P GQ EP G+ G P P P GS G G Sbjct: 342 GFPGSPGAKGEVGPAGSP---GSNGAP-GQRGEPGPQGHAGAQGPPGP-PGINGSPGGKG 396 Query: 262 Q 260 + Sbjct: 397 E 397
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 30.8 bits (68), Expect = 2.1 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Frame = -2 Query: 451 AAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALP--LPEAAGS 278 A+++ PGSPG PP P L +G E E G+ P P L +A Sbjct: 2 ASENKQRPGSPGPTDGPPPTPSPDRDERGALGWGAETEEGGDDPDHDPDHPHDLDDARRD 61 Query: 277 GGVAGQG-HAVEDVGQTI 227 G G A ED G + Sbjct: 62 GRAPAAGTDAGEDAGDAV 79
>MAST1_HUMAN (Q9Y2H9) Microtubule-associated serine/threonine-protein kinase 1 (EC| 2.7.11.1) (Syntrophin-associated serine/threonine-protein kinase) Length = 1570 Score = 30.8 bits (68), Expect = 2.1 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +3 Query: 297 SGRAGCATPVLPLL-SGSCPKGRLLLPCPTGSAKGGIAETKPGEPGIPQCCAAR 455 SG AG TP++P++ + P + ++P P G+ G+ E P P +P+ R Sbjct: 1426 SGEAG--TPLVPIVVEPARPGAKAVVPQPLGADSKGLQEPAPLAPSVPEAPRGR 1477
>GYRB_ACILW (Q44088) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 390 Score = 30.8 bits (68), Expect = 2.1 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 329 AVAFWFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 A + + L Q A ++ ++ + RD AR+A T + A + GLP KLA Sbjct: 251 AFSEYLLENPQAAKAIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKLA 303
>GYRB_ACIG9 (Q44272) DNA gyrase subunit B (EC 5.99.1.3) (Fragment)| Length = 390 Score = 30.8 bits (68), Expect = 2.1 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 329 AVAFWFLSKGQVAASMPNRLREGRHCRDQARRAGHPTVLRGARLVTGLPRKLA 487 A + + L Q A ++ ++ + RD AR+A T + A + GLP KLA Sbjct: 251 AFSEYLLENPQAAKAIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKLA 303
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 30.4 bits (67), Expect = 2.8 Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 1/75 (1%) Frame = -2 Query: 430 PGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHA 251 P P + P A P + + P A PA+P P AA +GG AG A Sbjct: 255 PSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPA 314 Query: 250 -VEDVGQTIGFGSQP 209 G G QP Sbjct: 315 PAPAAGGPAGVSGQP 329
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 30.4 bits (67), Expect = 2.8 Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 14/106 (13%) Frame = -2 Query: 448 AQHCGMPGSPGLVSAMPPFAEPVGHGSSNL--PFGQEPESNGNTGVAQPALPLPE----- 290 A H G+PG PG+ + P EP G L P G + + + P +P P+ Sbjct: 464 AGHKGLPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGITGPSGPIGPPGIPGPKGEPGL 523 Query: 289 -------AAGSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 G GVAG H +G QP + P G P Sbjct: 524 PGPPGFPGVGKPGVAGL-HGPPGKPGALGPQGQPGLPGPPGPPGPP 568 Score = 29.3 bits (64), Expect = 6.2 Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 7/67 (10%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALP-------LPEAAGS 278 G PG PG P P G LP +P +G G QP P LP G Sbjct: 287 GKPGPPGEPGPQGPIGVPGVQGPPGLPGVGKPGQDGIPG--QPGFPGGKGEQGLPGLPGP 344 Query: 277 GGVAGQG 257 G+ G G Sbjct: 345 PGLPGVG 351
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 30.0 bits (66), Expect = 3.6 Identities = 32/108 (29%), Positives = 38/108 (35%), Gaps = 4/108 (3%) Frame = -2 Query: 490 GGELAWKASDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQ 311 GG+L A P G PG PG MP F GH G+E E Sbjct: 165 GGDLQCPALCPP------GPPGPPG----MPGFKGHTGHKGGPGEIGKEGEKGSPGPPGP 214 Query: 310 PALP----LPEAAGSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSG 179 P +P L G G+ G D G IGF P + P +G Sbjct: 215 PGIPGSVGLQGPRGLRGLPGPMGPAGDRGD-IGFRGPPGIPGPPGRAG 261
>FLCN_XENTR (Q5M7Q1) Folliculin| Length = 579 Score = 29.6 bits (65), Expect = 4.7 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -1 Query: 131 CQLCHCHGPRSLICVHAL 78 C C HGPR+L C AL Sbjct: 8 CHFCELHGPRTLFCTEAL 25
>ANXA7_HUMAN (P20073) Annexin A7 (Annexin VII) (Synexin)| Length = 488 Score = 29.6 bits (65), Expect = 4.7 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Frame = -2 Query: 430 PGSPGLVSAMPPFA--EPVGHGSSNLPFGQEPESNG---NTGVAQPALPLPEAAGSGGVA 266 PG P + PPF P G SS P GQ P +G G A P +P G+GG Sbjct: 4 PGYPP--TGYPPFPGYPPAGQESSFPPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYP 61 Query: 265 GQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKH 167 G G+ + +P GAP + Sbjct: 62 APG----------GYPAPGGYPGAPQPGGAPSY 84
>ADA2B_RABIT (O77830) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)| (Alpha-2B adrenoreceptor) (Fragment) Length = 394 Score = 29.6 bits (65), Expect = 4.7 Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 14/110 (12%) Frame = -2 Query: 460 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGS-SNLPF--------GQEPESNGNTGVAQP 308 E + Q C +PG P + +P A PV S +N P G+ PE G + Sbjct: 202 EGESRQACPVPGGPSASAKLPTLATPVASASEANGPSKPAGEKEEGETPEDPGTQALPPG 261 Query: 307 ALPLPEAA-----GSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 LP + G G + + A E+ + V SP G+P Sbjct: 262 WATLPNSGQGQKEGVSGASLEEEAEEEEEEEEEEDEPQAVPVSPASVGSP 311
>CASZ1_HUMAN (Q86V15) Castor homolog 1 zinc finger protein (Castor-related| protein) Length = 1044 Score = 29.6 bits (65), Expect = 4.7 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 13/70 (18%) Frame = -2 Query: 436 GMPGS---------PGLVSAMPPFAEPVGHGSSNLPFGQE----PESNGNTGVAQPALPL 296 G+PGS GL + P F G GS++LP G S+G+ A P P Sbjct: 657 GLPGSIPLALALSNSGLPTPTPYFPILAGRGSTSLPVGTPSLLGAVSSGSAASATPDTPT 716 Query: 295 PEAAGSGGVA 266 A+G+G A Sbjct: 717 LVASGAGDSA 726
>ARNT2_MOUSE (Q61324) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT| protein 2) Length = 712 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Frame = -2 Query: 487 GELAWKASDEPRAAQHCGMPGSP-GLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQ 311 G++AW S P Q S G+ S+ P A+P + + P P N +A Sbjct: 570 GQVAWTGSRPPFPGQPSKTQSSAFGIGSSHPYPADPSSYSPLSSPAASSPSGNAYPSLAN 629 Query: 310 PALPLPEAAGSGG 272 E+ SGG Sbjct: 630 RTPGFAESGQSGG 642
>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1774 Score = 29.6 bits (65), Expect = 4.7 Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPL--PEAAGSGGVAG 263 G+PG PG +A G + LP P G G P P P G GVAG Sbjct: 936 GLPGEPGRFGINGSYAP----GPAGLP--GVPGKEGPPGFPGPPGPPGPPGKEGPPGVAG 989 Query: 262 QGHAVEDVG 236 Q +V DVG Sbjct: 990 QKGSVGDVG 998
>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor| Length = 1603 Score = 29.6 bits (65), Expect = 4.7 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Frame = -2 Query: 469 ASDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVA----QPAL 302 A EP A G PG PG V P +P G S + + + G G+A QP Sbjct: 1273 AEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGP 1332 Query: 301 P----LPEAAGSGGVAGQ 260 P P G+ G AG+ Sbjct: 1333 PGHPGPPGEPGTDGAAGK 1350
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPESNGNTGVAQPALPLPEAAGSGGVAG 263 G G PGL+ + P E G LP Q P G TG+ + P+ G GG G Sbjct: 1408 GEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGSPGQKGETGIPGASGPI----GPGGPPG 1462 Score = 28.9 bits (63), Expect = 8.1 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPES-NGNTGVAQPALPLPEAAGSGGVAGQ 260 G PG PG P P G +P + P G GV P + LP AG GVAG+ Sbjct: 1030 GPPGRPG------PQGPPGAAGEKGVPGEKGPIGPTGRDGVQGP-VGLPGPAGPPGVAGE 1082 Query: 259 GHAVEDVG 236 +VG Sbjct: 1083 DGDKGEVG 1090
>PAWR_RAT (Q62627) PRKC apoptosis WT1 regulator protein (Prostate apoptosis| response-4 protein) (Par-4) (Transcriptional repressor Par-4-like protein PAWR) Length = 332 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/63 (31%), Positives = 24/63 (38%) Frame = -2 Query: 475 WKASDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPL 296 WKA E A+ P PG P P G + G ++G G A PA P Sbjct: 19 WKAKREKMRAKQ--NPVGPGSSGGDPAAKSPAGPLAQTTAAGTSELNHGPAGAAAPAAPG 76 Query: 295 PEA 287 P A Sbjct: 77 PGA 79
>US10_HHV11 (P06486) Virion protein US10| Length = 312 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 Query: 463 DEPRAAQHCGMPGSPGLVSAMPPFAEPVGH 374 D P G+PGSPGL + P A P H Sbjct: 75 DNPGLPGSPGLPGSPGLPGSPGPHAPPANH 104
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 29.3 bits (64), Expect = 6.2 Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 9/90 (10%) Frame = -2 Query: 487 GELAWKASDE---------PRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPES 335 GE A E P A G PGSPG A +P G N P GQ P + Sbjct: 202 GEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQP-GPKGPNGPDGQ-PGA 259 Query: 334 NGNTGVAQPALPLPEAAGSGGVAGQGHAVE 245 +GN G PA P P + G G+ + A++ Sbjct: 260 DGNPGAPGPAGP-PGSPGERGICPKYCAID 288
>CAPP_YERPS (Q66G74) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 878 Score = 29.3 bits (64), Expect = 6.2 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Frame = +3 Query: 342 GSCPKGRLLLPCPTGSAKGGIAETKPGEP-----GIPQCCAARGSSLAFHASS 485 G P LL P GS KGG+ T+ GE G+P+ SSLA +A + Sbjct: 587 GGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTI---SSLALYAGA 636
>CAPP_YERPE (Q8ZA84) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 878 Score = 29.3 bits (64), Expect = 6.2 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Frame = +3 Query: 342 GSCPKGRLLLPCPTGSAKGGIAETKPGEP-----GIPQCCAARGSSLAFHASS 485 G P LL P GS KGG+ T+ GE G+P+ SSLA +A + Sbjct: 587 GGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTI---SSLALYAGA 636
>STML1_MOUSE (Q8CI66) Stomatin-like protein 1 (SLP-1)| Length = 399 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/51 (25%), Positives = 21/51 (41%) Frame = -3 Query: 309 PLCRFQKRQGPVVSLGRGMQWRTWGRRLDLXXXXXXXXXXXXAVHRSMDAA 157 P C+ + G V+S+G +Q+R W L + H +M A Sbjct: 127 PPCKLASKDGAVLSVGADVQFRIWDPVLSVMAVKDLNTATRMTAHNAMTKA 177
>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)| Length = 320 Score = 29.3 bits (64), Expect = 6.2 Identities = 25/106 (23%), Positives = 34/106 (32%), Gaps = 11/106 (10%) Frame = -2 Query: 448 AQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPA-----LPLPEAA 284 AQH G G+ G P + +P + +LP Q + G PA E A Sbjct: 24 AQHSGSGGADGGPGGGPGYQQPPAPPTQHLPLQQPQLPHAGGGREPPASYYAPRTAREPA 83 Query: 283 GSGGVAGQGHAVEDVGQTIGF------GSQPLVDNSPYDSGAPKHG 164 H D G+ G P + P + P HG Sbjct: 84 YPAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQAKGPAHG 129
>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Plakophilin-related armadillo repeat protein-interacting PDZ protein) Length = 2766 Score = 29.3 bits (64), Expect = 6.2 Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 13/81 (16%) Frame = -2 Query: 379 GHGSSNLPFGQEPES-NGNTGVAQPALPLPEAAGSGGVAGQGHAVE------------DV 239 G+ F QEP S NG + LPL AG G A VE D Sbjct: 2635 GNDQPGPSFKQEPPSANGKGPFPRRTLPLEPGAGRNGAAHDALCVEVLKTSAGLGLSLDG 2694 Query: 238 GQTIGFGSQPLVDNSPYDSGA 176 G++ G PLV Y GA Sbjct: 2695 GKSSVSGEGPLVIKRVYKGGA 2715
>BIND_ARBPU (P24608) Bindin precursor| Length = 480 Score = 29.3 bits (64), Expect = 6.2 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 2/95 (2%) Frame = -2 Query: 457 PRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGS 278 P AA G G+P PP +P+G + F EP G + A+ + + E Sbjct: 288 PAAAGPAGGFGAP---QGQPPVGQPIGEAAGGGEFLGEPGVGGESEFAEYSSSIGE---- 340 Query: 277 GGVAGQGHAVEDVGQTIGFG--SQPLVDNSPYDSG 179 G +E + +G P+ N PYD G Sbjct: 341 -GETINAEVMEKIKAVLGATKIDLPVDINDPYDLG 374
>CLCF_ARATH (Q8RXR2) Chloride channel protein CLC-f (AtCLC-f)| Length = 781 Score = 29.3 bits (64), Expect = 6.2 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = -2 Query: 289 AAGS--GGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLRIGVALGVSSAI 116 AAG GG H+V+D GF + L D++P + +LL IG +GV++ I Sbjct: 92 AAGEEDGGGISNLHSVDDRNDEYGFDEEVLGDSAPPE-------WALLLIGCLIGVAAGI 144 Query: 115 VMA 107 +A Sbjct: 145 CVA 147
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 29.3 bits (64), Expect = 6.2 Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 11/107 (10%) Frame = -2 Query: 460 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGV-AQPALPLPEA- 287 +P G+PG PGL P GS +P G G+ QP P P Sbjct: 775 QPGTRGDAGLPGQPGLKGLPGETGAPGFRGSQGMP--------GMPGLKGQPGFPGPSGQ 826 Query: 286 AGSGGVAGQGHAVE-------DVGQ--TIGFGSQPLVDNSPYDSGAP 173 G G GQ HA +GQ + G G P P D G P Sbjct: 827 PGQSGPPGQ-HAFPGTPGREGPLGQPGSPGLGGLPGDRGEPGDPGVP 872
>FLCN_RAT (Q76JQ2) Folliculin (Birt-Hogg-Dube syndrome protein homolog)| Length = 579 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%) Frame = -1 Query: 131 CQLCHCHGPRSLIC---VHA-LLRRCGAGD 54 C C HGPR+L C +HA L + G+GD Sbjct: 8 CHFCELHGPRTLFCTEVLHAPLPQGAGSGD 37
>FLCN_MOUSE (Q8QZS3) Folliculin| Length = 579 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%) Frame = -1 Query: 131 CQLCHCHGPRSLIC---VHA-LLRRCGAGD 54 C C HGPR+L C +HA L + G+GD Sbjct: 8 CHFCELHGPRTLFCTEVLHAPLPQGAGSGD 37
>FLCN_HUMAN (Q8NFG4) Folliculin (Birt-Hogg-Dube syndrome protein) (BHD skin| lesion fibrofolliculoma protein) Length = 579 Score = 28.9 bits (63), Expect = 8.1 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = -1 Query: 131 CQLCHCHGPRSLICVHALLRRCGAGD 54 C C HGPR+L C L GD Sbjct: 8 CHFCELHGPRTLFCTEVLHAPLPQGD 33
>FLCN_BOVIN (Q3B7L5) Folliculin| Length = 579 Score = 28.9 bits (63), Expect = 8.1 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%) Frame = -1 Query: 131 CQLCHCHGPRSLIC---VHA-LLRRCGAGD 54 C C HGPR+L C +HA L + G+GD Sbjct: 8 CHFCELHGPRTLFCTEVLHAPLPQGAGSGD 37
>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV) (Restin) (Related to endostatin)] Length = 1388 Score = 28.9 bits (63), Expect = 8.1 Identities = 23/67 (34%), Positives = 27/67 (40%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQG 257 G+PG PG M P P G + P PE G GV A LP G G G Sbjct: 631 GIPGKPGTDVFMGPPGSPGEDGPAGEPGPPGPE--GQPGV-DGATGLPGMKGEKGARGPN 687 Query: 256 HAVEDVG 236 +V + G Sbjct: 688 GSVGEKG 694
>TAF9_YEAST (Q05027) Transcription initiation factor TFIID subunit 9| (TBP-associated factor 9) (TBP-associated factor 17 kDa) (TAFII-17) (TAFII20) Length = 157 Score = 28.9 bits (63), Expect = 8.1 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -2 Query: 322 GVAQPALPLPEAAGSGGVAGQGHAVEDVGQTIGFGSQ 212 GV + AL + AGSG AG G VED+ I +Q Sbjct: 66 GVLKDALVYNDYAGSGNSAGSGLGVEDIRLAIAARTQ 102
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 28.9 bits (63), Expect = 8.1 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -2 Query: 424 SPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQG 257 S GLVS P F + + + + +A P P P A+GS G +G G Sbjct: 2899 SSGLVSPAPSFYSKEYDNEGTVDYSE------TSSLADPCSPSPGASGSAGKSGDG 2948
>NAF1_MOUSE (Q9WUU8) Nef-associated factor 1 (Naf1) (TNFAIP3-interacting| protein 1) (A20-binding inhibitor of NF-kappa B activation) (ABIN) (Virion-associated nuclear shuttling protein) (VAN) (mVAN) Length = 647 Score = 28.9 bits (63), Expect = 8.1 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = -2 Query: 313 QPALPLPEAAGSGGVAGQGHA 251 QP+ P PE AG GVAGQ A Sbjct: 276 QPSSPKPEGAGKKGVAGQQQA 296
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.9 bits (63), Expect = 8.1 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPES-NGNTGVAQPALPLPEAAGSGGVAGQ 260 G PG PG P P G +P + P G GV P + LP AG GVAG+ Sbjct: 1030 GPPGRPG------PQGPPGAAGEKGVPGEKGPIGPTGRDGVQGP-VGLPGPAGPPGVAGE 1082 Query: 259 GHAVEDVG 236 +VG Sbjct: 1083 DGDKGEVG 1090
>UL06_EHV1V (P84458) Virion gene 56 protein| Length = 753 Score = 28.9 bits (63), Expect = 8.1 Identities = 16/68 (23%), Positives = 28/68 (41%) Frame = -2 Query: 427 GSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHAV 248 G+ GL+ + + H L + ++G+T + LP + G G GH V Sbjct: 471 GNSGLLDQLRDRESEITHLREQLLRVSQAAADGSTQPGASSAALPGSGAKSGAGGLGHEV 530 Query: 247 EDVGQTIG 224 D+ +G Sbjct: 531 IDIRNLMG 538
>UL06_EHV1B (P28944) Virion gene 56 protein| Length = 753 Score = 28.9 bits (63), Expect = 8.1 Identities = 16/68 (23%), Positives = 28/68 (41%) Frame = -2 Query: 427 GSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHAV 248 G+ GL+ + + H L + ++G+T + LP + G G GH V Sbjct: 471 GNSGLLDQLRDRESEITHLREQLLRVSQAAADGSTQPGASSAALPGSGAKSGAGGLGHEV 530 Query: 247 EDVGQTIG 224 D+ +G Sbjct: 531 IDIRNLMG 538
>TYR3_CAEEL (Q19673) Putative tyrosinase-like protein tyr-3 precursor| Length = 683 Score = 28.9 bits (63), Expect = 8.1 Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 15/65 (23%) Frame = -1 Query: 263 AGACSGGRGADDWIWQPTI------GGQQPI---------RQRCTEAWMQLAQNRSCTGC 129 A C GG GAD I PT GQQ +C W Q Q RS G Sbjct: 545 AATCGGGGGADS-ISNPTTMPPATNNGQQNTPCDSPMCYNEDQCCPIWAQRGQCRSNPGY 603 Query: 128 QLCHC 114 C C Sbjct: 604 MTCQC 608
>SM50_STRPU (P11994) 50 kDa spicule matrix protein precursor| Length = 445 Score = 28.9 bits (63), Expect = 8.1 Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 16/92 (17%) Frame = -2 Query: 421 PGLVSAMPPFAEPVGHGSSNLPFGQEPESNG---------NTGVAQPAL--PLPEAAGSG 275 PG+ P F G G FG +P G G QP + P Sbjct: 220 PGMGGRQPGFGNQPGMGGRQPGFGNQPGMGGRQPGWGNQPGVGGRQPGMGGQQPGWGNQP 279 Query: 274 GVAGQ----GHAVEDVGQTIGFGSQP-LVDNS 194 GV G+ G G+ GFG+QP +VDN+ Sbjct: 280 GVGGRQPGMGGQPGVGGRQPGFGNQPGMVDNN 311
>MDC1_MOUSE (Q5PSV9) Mediator of DNA damage checkpoint protein 1| Length = 1707 Score = 28.9 bits (63), Expect = 8.1 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = -2 Query: 358 PFGQEPESNGNTGVAQPALPLPEAAGSGGVAGQGHAVEDVGQTIGFGSQP 209 PFG +++ G QP + A S G AG+ E G T G +QP Sbjct: 215 PFGLGSDTDEEQG-QQPGVEESSLADSSGAAGEAEQPEANGTTAGIQAQP 263
>CAP1_DICDI (P19198) cAMP-binding protein CABP1A/CABP1B (CABP1 protein)| Length = 333 Score = 28.9 bits (63), Expect = 8.1 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 5/81 (6%) Frame = -2 Query: 436 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-----EPESNGNTGVAQPALPLPEAAGSGG 272 G P PG PP P G+ P GQ + + G G QPA G+ Sbjct: 62 GAPQQPGGYPTPPPPGAPGGYPPQQQPAGQYGAPPQQQPAGQYGAPQPA----GQYGAPQ 117 Query: 271 VAGQGHAVEDVGQTIGFGSQP 209 AGQ A + GQ +G+ P Sbjct: 118 PAGQYGAPQPAGQ---YGAPP 135
>GCP6_HUMAN (Q96RT7) Gamma-tubulin complex component 6 (GCP-6)| Length = 1819 Score = 28.9 bits (63), Expect = 8.1 Identities = 30/115 (26%), Positives = 41/115 (35%), Gaps = 14/115 (12%) Frame = -2 Query: 466 SDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQ-------- 311 S PR H +P ++ A+ P AEP P G +S + G Sbjct: 1261 STRPRWNTHVPIPPPHMVLGALSPEAEPNTPRPQQSPPGHTSQSALSLGAQSTVLDCGPR 1320 Query: 310 ------PALPLPEAAGSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHG 164 P+L P + G G V DV T QP N+P DS + + G Sbjct: 1321 LPVEVGPSLSSPSSGCGEGSISVGENVSDVAPT-----QPWWPNTPGDSVSEELG 1370
>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor| Length = 743 Score = 28.9 bits (63), Expect = 8.1 Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 17/107 (15%) Frame = -2 Query: 442 HCGMPGSPGLVSAMPPFAEPVGHGSSNL--------------PFGQEPESNGNTGVAQPA 305 H G+PG PG+ + P EP G L P G P G G +P Sbjct: 466 HKGLPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIVGPSGPIG-PPGIPGPKG--EPG 522 Query: 304 LPLP---EAAGSGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 173 LP P G GVAG H +G QP + P G P Sbjct: 523 LPGPPGFPGVGKPGVAGL-HGPPGKPGALGPQGQPGLPGPPGPPGPP 568
>KAPR_MAGGR (O14448) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 390 Score = 28.9 bits (63), Expect = 8.1 Identities = 17/40 (42%), Positives = 18/40 (45%) Frame = -2 Query: 394 FAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPEAAGSG 275 F P G S+ PFG E G G QP L EA G G Sbjct: 6 FTSPFGANSN--PFGSPEERRGVAGSIQPVLEEEEADGIG 43
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 28.9 bits (63), Expect = 8.1 Identities = 30/107 (28%), Positives = 38/107 (35%), Gaps = 8/107 (7%) Frame = -2 Query: 469 ASDEPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPESNGNTGVAQPALPLPE 290 A+ EP A G+PG+PGL P +G TG A P P Sbjct: 425 ANGEPGKAGEKGLPGAPGLRGL--------------------PGKDGETGAAGP----PG 460 Query: 289 AAGSGGVAGQGHAVEDVG--------QTIGFGSQPLVDNSPYDSGAP 173 AG G G+ A G G G +P P ++GAP Sbjct: 461 PAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAP 507 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,053,057 Number of Sequences: 219361 Number of extensions: 1988151 Number of successful extensions: 8490 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 7470 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8445 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
