Clone Name | rbart40g10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (E... | 50 | 2e-06 | 2 | GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC ... | 42 | 0.001 | 3 | MS3L1_MOUSE (Q9WVG9) Male-specific lethal 3-like 1 (MSL3-like 1)... | 29 | 4.9 |
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>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = -2 Query: 455 LSWMKVTDVLSGDKTFDAVKTPLLAAWVERFSAIDAAKAALP-DVGRLVEF 306 L W D L G + D +TP LAAW ERF A DAAK +P D +L+EF Sbjct: 173 LGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEF 223
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/47 (42%), Positives = 28/47 (59%) Frame = -2 Query: 446 MKVTDVLSGDKTFDAVKTPLLAAWVERFSAIDAAKAALPDVGRLVEF 306 ++ + L G DA TPLL W +RF+A AAK LPD ++V+F Sbjct: 175 LRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQF 221
>MS3L1_MOUSE (Q9WVG9) Male-specific lethal 3-like 1 (MSL3-like 1) (Male-specific| lethal-3 homolog 1) Length = 525 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -3 Query: 424 PVTRPSTPSRLRSWPRGWSASARSTRQRRPCRMWAGWLSSPRHER 290 P P+TP R ++ P + RSTR C + SSP+ +R Sbjct: 332 PTGEPATPKRRKAEPEALQSLRRSTRHSTNCDRLSESSSSPQPKR 376 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,345,801 Number of Sequences: 219361 Number of extensions: 904717 Number of successful extensions: 2063 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2041 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2062 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)