>RS3_SPICI (O31161) 30S ribosomal protein S3|
          Length = 251

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = +1

Query: 1   KTWHSNWYSVSI*RSENKNEHSFFLQKKCIIQGTKGSS----SIERTKASILLINKNYRM 168
           KTW S WY+    +   K  H     +K +++  KG+S     IERTK  I++  +  R+
Sbjct: 15  KTWDSRWYAEK--QEYVKWLHQDIKIRKALMKELKGASVSKIEIERTKKEIVIFIRTARV 72

Query: 169 TTIVNLNQRDYAQ 207
             ++    ++ A+
Sbjct: 73  GVVLGQEGKNIAK 85

>MFN1_RAT (Q8R4Z9) Transmembrane GTPase MFN1 (EC 3.6.5.-) (Mitofusin-1)|
           (Mitochondrial transmembrane GTPase FZO1B)
          Length = 741

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 95  CIIHFFWRKKECSFLFSDLYI 33
           C++H FW K +C+ L  DL +
Sbjct: 156 CLVHVFWPKAKCALLRDDLVL 176

>MFN1_MOUSE (Q811U4) Transmembrane GTPase MFN1 (EC 3.6.5.-) (Mitofusin-1)|
          Length = 741

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 95  CIIHFFWRKKECSFLFSDLYI 33
           C++H FW K +C+ L  DL +
Sbjct: 156 CLVHVFWPKAKCALLRDDLVL 176

>SC160_YEAST (P06105) Protein SCP160 (Protein HX)|
          Length = 1222

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +1

Query: 115 SIERTKASILLINK--NYRMTTIVNLNQRDYAQPMDQTTTLFKGTMSSWDLNGPSITQQG 288
           SIE  +AS+   N+  N   T   N+  + Y    +   +LFK + ++W L    I++Q 
Sbjct: 534 SIEEIQASLNKANESLNSLRTKQNNMETKTYEFSEEVQDSLFKPSSATWKLIMEDISEQE 593

Query: 289 GKLRCPL 309
           G L+  L
Sbjct: 594 GHLQIKL 600

>GLTF_ECOLI (P28721) Protein gltF precursor|
          Length = 254

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +1

Query: 82  KCIIQGTKGSS-SIERTKASILLI-NKNYRMTTIVNLNQRDYAQPMDQTTTLFKGTMSSW 255
           K +  G K S+ +I  T  +++ + +K+ R +TIV LN   Y +    T    KGT +++
Sbjct: 72  KLVQLGRKNSTLNITCTAPTLIAVTSKDNRQSTIVALNDTSYIEKAYDTLVDMKGTKNAF 131

Query: 256 DLNGPSITQQGG 291
            L      Q+ G
Sbjct: 132 GLGSAPNGQKIG 143

>TRI63_HUMAN (Q969Q1) Ubiquitin ligase TRIM63 (EC 6.3.2.-) (Tripartite|
           motif-containing 63) (Muscle-specific RING finger
           protein 1) (MuRF1) (MURF-1) (RING finger protein 28)
           (Striated muscle RING zinc finger protein) (Iris RING
           finger protein)
          Length = 353

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 229 LFKGTMSSWDLNGPSITQQGGKLRCP 306
           +F+     W   G S++  GG+ RCP
Sbjct: 51  IFQAANPYWTSRGSSVSMSGGRFRCP 76

>VTER_HHV6U (P24443) Probable DNA packaging protein (Terminase)|
          Length = 667

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +1

Query: 61  HSFFLQKKCIIQGTKGSSSIERTKASI---LLINKNYRMTTIVNLNQRDYAQP 210
           H FF + K II+G    +S  +    I   +  NK+ ++T     +Q   AQP
Sbjct: 519 HPFFTEVKIIIEGNSNQASAVKIACIIKENITANKSIQVTFFHTPDQNQIAQP 571

>GCC2_MOUSE (Q8CHG3) GRIP and coiled-coil domain-containing protein 2 (Golgi|
            coiled coil protein GCC185)
          Length = 1679

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = +1

Query: 91   IQGTKGSSSIERTKASILLINKNYRMTTIVNLNQRDYAQPMDQ 219
            +Q  K    +++T   + L+ K+ + TT++N+   DY + M +
Sbjct: 1120 LQFQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKE 1162

>RBP24_HUMAN (Q4ZG46) Ran-binding protein 2-like 4 (RanBP2L4)|
          Length = 1583

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = +1

Query: 91   IQGTKGSSSIERTKASILLINKNYRMTTIVNLNQRDYAQPMDQ 219
            +Q  K    +++T   + L+ K+ + TT++N+   DY + M +
Sbjct: 1028 VQLQKQKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKE 1070

>GCC2_HUMAN (Q8IWJ2) GRIP and coiled-coil domain-containing protein 2 (Golgi|
            coiled coil protein GCC185) (CTCL tumor antigen se1-1)
            (CLL-associated antigen KW-11) (NY-REN-53 antigen)
          Length = 1583

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = +1

Query: 91   IQGTKGSSSIERTKASILLINKNYRMTTIVNLNQRDYAQPMDQ 219
            +Q  K    +++T   + L+ K+ + TT++N+   DY + M +
Sbjct: 1028 VQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKE 1070


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,083,028
Number of Sequences: 219361
Number of extensions: 722110
Number of successful extensions: 1792
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)