ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart40g06 |
|---|---|
| Clone Library Name | barley_pub |
>PIR7B_ORYSA (Q43360) Putative esterase PIR7B (EC 3.1.-.-)| Length = 268 Score = 156 bits (395), Expect = 3e-38 Identities = 76/95 (80%), Positives = 85/95 (89%) Frame = -3 Query: 548 PPKDLALAKMLVRPGNQFLDDPVMKDACLLTADKYGSVKKVYVVAKADGSSTEEMQRWMV 369 P +DLALAKMLVRPGNQF+DDPVMKD LLT YGSVKKVYV+AKAD SSTEEMQRWMV Sbjct: 171 PAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKADSSSTEEMQRWMV 230 Query: 368 TLSPGTEVEEIAGADHASMSSKHKELCDVLIKIAD 264 +SPGT+VEEIAGADHA M+SK +ELCD+LIKIA+ Sbjct: 231 AMSPGTDVEEIAGADHAVMNSKPRELCDILIKIAN 265
>PIR7A_ORYSA (Q40708) Putative esterase PIR7A (EC 3.1.-.-)| Length = 263 Score = 131 bits (330), Expect = 1e-30 Identities = 61/94 (64%), Positives = 75/94 (79%) Frame = -3 Query: 548 PPKDLALAKMLVRPGNQFLDDPVMKDACLLTADKYGSVKKVYVVAKADGSSTEEMQRWMV 369 PP+DL LA MLVRPG ++DDP+MKD LLT YGSVK+V++VA D SS EEMQRW + Sbjct: 166 PPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDDASSDEEMQRWTI 225 Query: 368 TLSPGTEVEEIAGADHASMSSKHKELCDVLIKIA 267 LSPG EVEE+AGADH +M SK +ELCD+L++IA Sbjct: 226 DLSPGVEVEELAGADHMAMCSKPRELCDLLLRIA 259
>PNAE_RAUSE (Q9SE93) Polyneuridine-aldehyde esterase precursor (EC 3.1.1.78)| (Polyneuridine aldehyde esterase) Length = 264 Score = 72.8 bits (177), Expect = 6e-13 Identities = 38/94 (40%), Positives = 55/94 (58%) Frame = -3 Query: 542 KDLALAKMLVRPGNQFLDDPVMKDACLLTADKYGSVKKVYVVAKADGSSTEEMQRWMVTL 363 +DL LAKML RPG+ F D + A + ++YGSVK+ Y+ D S E Q+W V Sbjct: 173 EDLELAKMLTRPGSLFFQD--LAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVES 230 Query: 362 SPGTEVEEIAGADHASMSSKHKELCDVLIKIADN 261 +V+EI ADH M S+ +E+C L+ I+D+ Sbjct: 231 VGADKVKEIKEADHMGMLSQPREVCKCLLDISDS 264
>HNL_HEVBR (P52704) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39)| ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) Length = 257 Score = 60.5 bits (145), Expect = 3e-09 Identities = 32/97 (32%), Positives = 51/97 (52%) Frame = -3 Query: 545 PKDLALAKMLVRPGNQFLDDPVMKDACLLTADKYGSVKKVYVVAKADGSSTEEMQRWMVT 366 P++ LAKML R G+ F + ++ T + YGS+KK+YV D E Q W + Sbjct: 163 PEEYELAKMLTRKGSLFQN--ILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIE 220 Query: 365 LSPGTEVEEIAGADHASMSSKHKELCDVLIKIADNLN 255 +V ++ G DH +K KE+ ++L ++AD N Sbjct: 221 NYKPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTYN 257
>HNL_MANES (P52705) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39)| ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase) (Oxynitrilase) Length = 257 Score = 52.8 bits (125), Expect = 6e-07 Identities = 29/89 (32%), Positives = 47/89 (52%) Frame = -3 Query: 530 LAKMLVRPGNQFLDDPVMKDACLLTADKYGSVKKVYVVAKADGSSTEEMQRWMVTLSPGT 351 LAKM++R G+ F + V+ T YGS+KKVY+ D + QRW + Sbjct: 168 LAKMVMRKGSLFQN--VLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRWQIANYKPD 225 Query: 350 EVEEIAGADHASMSSKHKELCDVLIKIAD 264 +V ++ G DH +K +E+ +L ++AD Sbjct: 226 KVYQVQGGDHKLQLTKTEEVAHILQEVAD 254
>SYA_BARQU (Q6FZF1) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 888 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = -3 Query: 539 DLALAKMLVRPGNQFLDDPVMKDACLLTADKYGSVKKVYVVAKADGSSTEEM-QRWMVTL 363 D+ L V LDD + + A L +KYG +V VV+ + E + +RW + L Sbjct: 618 DIVLQNSEVTTHLMALDDAISEGAMALFGEKYGD--EVRVVSMGNPLEPEGLKKRWSIEL 675 Query: 362 SPGTEVE 342 GT VE Sbjct: 676 CGGTHVE 682
>Y632_PROMM (Q7V7V1) UPF0247 protein PMT0632| Length = 144 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Frame = -3 Query: 452 DKYGSVKKVYVVAKADGSSTE--EMQRWMVTLSPGTEVEEIA 333 +KYGS + +V+ ADG S E +W ++LS T E+A Sbjct: 80 EKYGSQRLAFVIGGADGLSAELKNSTQWQLSLSAMTLPHELA 121
>QSEB_SALTY (P66795) Transcriptional regulatory protein qseB| Length = 219 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/50 (30%), Positives = 30/50 (60%) Frame = -3 Query: 422 VVAKADGSSTEEMQRWMVTLSPGTEVEEIAGADHASMSSKHKELCDVLIK 273 +V +A G ++ E++ VTL+PG V +AG + ++ K L ++L++ Sbjct: 115 LVRRASGQASSELRHGQVTLNPGNLVATLAG-EPLALKPKEFALLELLLR 163
>QSEB_SALTI (P66796) Transcriptional regulatory protein qseB| Length = 219 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/50 (30%), Positives = 30/50 (60%) Frame = -3 Query: 422 VVAKADGSSTEEMQRWMVTLSPGTEVEEIAGADHASMSSKHKELCDVLIK 273 +V +A G ++ E++ VTL+PG V +AG + ++ K L ++L++ Sbjct: 115 LVRRASGQASSELRHGQVTLNPGNLVATLAG-EPLALKPKEFALLELLLR 163
>TNR21_MOUSE (Q9EPU5) Tumor necrosis factor receptor superfamily member 21| precursor (TNFR-related death receptor 6) (Death receptor 6) Length = 655 Score = 30.0 bits (66), Expect = 4.5 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 12/76 (15%) Frame = +1 Query: 307 ELMLAWSAPAISSTSVPGLSVTIQRCISSVLEPSALATTYTFFTD---PYL--------- 450 +L L S +S + +P +V ++ +EPS L FF D P L Sbjct: 508 KLALPMSPSPLSPSPMPSPNVKLENSTLLTVEPSPLDKNKCFFVDESEPLLRCDSTSSGS 567 Query: 451 SAVSRHASFITGSSRN 498 SA+SR+ SFIT ++ Sbjct: 568 SALSRNGSFITKEKKD 583
>TDGF2_HUMAN (P51864) Teratocarcinoma-derived growth factor 2 (Epidermal growth| factor-like cripto protein CR3) (Cripto-3 growth factor) Length = 188 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Frame = +2 Query: 299 CAWSSCWHGQLQQSPR---PLCQGLXXXXXXXXXLCWSHQPWLPHIPSSQT 442 C+ CWHGQL+ P+ P C GL L S P LP PS++T Sbjct: 128 CSLCKCWHGQLRCFPQAFLPGCDGL----VMDEHLVASRTPELP--PSART 172
>TDGF1_HUMAN (P13385) Teratocarcinoma-derived growth factor 1 precursor| (Epidermal growth factor-like cripto protein CR1) (Cripto-1 growth factor) (CRGF) Length = 188 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Frame = +2 Query: 299 CAWSSCWHGQLQQSPR---PLCQGLXXXXXXXXXLCWSHQPWLPHIPSSQT 442 C+ CWHGQL+ P+ P C GL L S P LP PS++T Sbjct: 128 CSLCKCWHGQLRCFPQAFLPGCDGL----VMDEHLVASRTPELP--PSART 172
>OMP_RAT (P08523) Olfactory marker protein (Olfactory neuronal-specific| protein) Length = 162 Score = 29.3 bits (64), Expect = 7.7 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 478 ITGSSRNWFPGLTNIFAR 531 ITG+S+NW P LTN+ R Sbjct: 79 ITGTSQNWTPDLTNLMTR 96
>OMP_MOUSE (Q64288) Olfactory marker protein| Length = 162 Score = 29.3 bits (64), Expect = 7.7 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 478 ITGSSRNWFPGLTNIFAR 531 ITG+S+NW P LTN+ R Sbjct: 79 ITGTSQNWTPDLTNLMTR 96
>OMP_HUMAN (P47874) Olfactory marker protein (Olfactory neuronal-specific| protein) Length = 162 Score = 29.3 bits (64), Expect = 7.7 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 478 ITGSSRNWFPGLTNIFAR 531 ITG+S+NW P LTN+ R Sbjct: 79 ITGTSQNWTPDLTNLMTR 96
>DCTA2_PSEAE (Q9I4F5) C4-dicarboxylate transport protein 2| Length = 436 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = -3 Query: 485 PVMKDACLLTADKYGSVKKVYVVAKADGSSTEEMQRWMVTLSPGTEVEEIAGADHAS 315 PV A +L D++ S + +G +T + +W L GT E+AG +AS Sbjct: 366 PVAGLALILGIDRFMSEARALTNLVGNGVATVVVSKWCKQLDEGTLQRELAGEGNAS 422 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,245,899 Number of Sequences: 219361 Number of extensions: 1669793 Number of successful extensions: 4580 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4370 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4576 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
