ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190046.1| Oryza sativa (japonica cultivar-group), predic... 168 1e-38
2emb|Z34270.1|OSPIR7BR O.sativa (cv. Nohrin) Pir7b mRNA 168 1e-38
3emb|Z34271.1|OSPIR7BAR O.sativa (var. IR36) PIR7a and PIR7b genes 167 5e-38
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
5dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
6dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic D... 167 5e-38
7dbj|AK073211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
8dbj|AK099792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
9emb|AL663098.8| Mouse DNA sequence from clone RP23-24L23 on chro... 44 0.48
10gb|AC158594.12| Mus musculus 10 BAC RP23-197I5 (Roswell Park Can... 42 1.9
11gb|AC131743.3| Mus musculus BAC clone RP23-68K21 from chromosome... 42 1.9
12emb|CR855956.1| Paramecium tetraurelia macronuclear, putative ge... 42 1.9
13gb|AC130307.3| Homo sapiens chromosome 11, clone RP11-15D10, com... 42 1.9
14gb|AC121901.2| Mus musculus BAC clone RP24-168D2 from 6, complet... 42 1.9
15gb|AC153523.7| Mus musculus 10 BAC RP23-463C2 (Roswell Park Canc... 42 1.9
16gb|AC115082.3| Homo sapiens chromosome 11, clone CTD-2386P16, co... 42 1.9
17gb|AC096651.1| Homo sapiens BAC clone RP11-16J15 from 4, complet... 42 1.9
18gb|AC108940.3| Homo sapiens BAC clone RP11-728F4 from 2, complet... 42 1.9
19gb|AC068769.19| Homo sapiens 3 BAC RP11-14I2 (Roswell Park Cance... 42 1.9
20gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, co... 42 1.9
21emb|BX897744.17| Zebrafish DNA sequence from clone DKEY-168A10 i... 42 1.9
22gb|AC171002.2| Mus musculus BAC clone RP23-145F22 from chromosom... 42 1.9
23gb|AC102892.9| Mus musculus chromosome 5, clone RP24-362B10, com... 40 7.5
24ref|NM_127925.2| Arabidopsis thaliana catalytic/ hydrolase, acti... 40 7.5
25gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, com... 40 7.5
26gb|BT014901.1| Arabidopsis thaliana At2g23610 gene, complete cds 40 7.5
27gb|BT015031.1| Arabidopsis thaliana At2g23610 mRNA, complete cds 40 7.5
28gb|AC125531.3| Mus musculus BAC clone RP23-396D12 from chromosom... 40 7.5
29gb|AC156606.12| Mus musculus chromosome 7, clone RP23-78N8, comp... 40 7.5
30emb|AL355580.13| Human DNA sequence from clone RP11-76K10 on chr... 40 7.5
31emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chrom... 40 7.5
32emb|AL139274.17| Human DNA sequence from clone RP11-393I2 on chr... 40 7.5
33gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, c... 40 7.5
34gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence 40 7.5
35emb|BX324115.8| Zebrafish DNA sequence from clone DKEYP-70E6, co... 40 7.5
36gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map... 40 7.5
37gb|AC160123.2| Mus musculus BAC clone RP23-354J5 from chromosome... 40 7.5
38emb|BX821370.1|CNS0A981 Arabidopsis thaliana Full-length cDNA Co... 40 7.5
39emb|BX004868.9| Zebrafish DNA sequence from clone DKEY-209F8, co... 40 7.5
40emb|BX000487.7| Zebrafish DNA sequence from clone BUSM1-162F22 i... 40 7.5
41emb|CR354391.7| Zebrafish DNA sequence from clone CH211-256L9 in... 40 7.5
42dbj|AP001695.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.5
43gb|AC110885.14| Mus musculus chromosome 7, clone RP24-342P18, co... 40 7.5
44gb|AC138151.3| Mus musculus BAC clone RP24-294E11 from 7, comple... 40 7.5
45emb|CT030173.7| Mouse DNA sequence from clone RP24-264B23 on chr... 40 7.5
46emb|AL109967.2|HS22F01 Homo sapiens chromosome 21 PAC LLNCO21F01... 40 7.5
47dbj|AP000229.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 7.5
48dbj|AP000144.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL... 40 7.5
49dbj|AP001594.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 7.5 
>ref|NM_190046.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 807

 Score =  168 bits (85), Expect = 1e-38
 Identities = 208/249 (83%)
 Strand = Plus / Minus

                                                                       
Query: 302 gcttggagctcatgctggcatggtcagctccagcaatctcctcgacctctgtgccagggc 361
           |||||||| |||||  ||| ||||||||||| || ||||||||||| || ||||||||||
Sbjct: 757 gcttggagttcatgacggcgtggtcagctccggcgatctcctcgacgtccgtgccagggc 698

                                                                       
Query: 362 ttagcgtcaccatccagcgctgcatctcctctgtgctggagccatcagccttggctacca 421
           | | || ||||||||| |||||||||||||| ||||||||||  ||||||||||| | ||
Sbjct: 697 tcatcgccaccatccaccgctgcatctcctcggtgctggagctgtcagccttggcgatca 638

                                                                       
Query: 422 catataccttcttcacagacccatatttgtctgcggtgagcaggcatgcatccttcatca 481
           | || ||||||||||| || ||||| ||| |   |||||||| ||   |||| |||||||
Sbjct: 637 cgtacaccttcttcaccgatccatagttgccattggtgagcaagctctcatctttcatca 578

                                                                       
Query: 482 ccggatcatccaggaactggtttccaggcctcaccaacattttcgccagggccaaatcct 541
           |||||||||||| |||||| || ||||| ||||||| ||| |||||||| |||| |||||
Sbjct: 577 ccggatcatccatgaactgattgccaggtctcaccagcatcttcgccagtgccagatcct 518

                    
Query: 542 ttggtggac 550
            || |||||
Sbjct: 517 ctgctggac 509
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>emb|Z34270.1|OSPIR7BR O.sativa (cv. Nohrin) Pir7b mRNA
          Length = 948

 Score =  168 bits (85), Expect = 1e-38
 Identities = 208/249 (83%)
 Strand = Plus / Minus

                                                                       
Query: 302 gcttggagctcatgctggcatggtcagctccagcaatctcctcgacctctgtgccagggc 361
           |||||||| |||||  ||| ||||||||||| || ||||||||||| || ||||||||||
Sbjct: 741 gcttggagttcatgacggcgtggtcagctccggcgatctcctcgacgtccgtgccagggc 682

                                                                       
Query: 362 ttagcgtcaccatccagcgctgcatctcctctgtgctggagccatcagccttggctacca 421
           | | || ||||||||| |||||||||||||| ||||||||||  ||||||||||| | ||
Sbjct: 681 tcatcgccaccatccaccgctgcatctcctcggtgctggagctgtcagccttggcgatca 622

                                                                       
Query: 422 catataccttcttcacagacccatatttgtctgcggtgagcaggcatgcatccttcatca 481
           | || ||||||||||| || ||||| ||| |   |||||||| ||   |||| |||||||
Sbjct: 621 cgtacaccttcttcaccgatccatagttgccattggtgagcaagctctcatctttcatca 562

                                                                       
Query: 482 ccggatcatccaggaactggtttccaggcctcaccaacattttcgccagggccaaatcct 541
           |||||||||||| |||||| || ||||| ||||||| ||| |||||||| |||| |||||
Sbjct: 561 ccggatcatccatgaactgattgccaggtctcaccagcatcttcgccagtgccagatcct 502

                    
Query: 542 ttggtggac 550
            || |||||
Sbjct: 501 ctgctggac 493
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>emb|Z34271.1|OSPIR7BAR O.sativa (var. IR36) PIR7a and PIR7b genes
          Length = 4397

 Score =  167 bits (84), Expect = 5e-38
 Identities = 201/240 (83%)
 Strand = Plus / Minus

                                                                        
Query: 302  gcttggagctcatgctggcatggtcagctccagcaatctcctcgacctctgtgccagggc 361
            |||||||| |||||  ||| ||||||||||| || ||||||||||| || ||||||||||
Sbjct: 4155 gcttggagttcatgacggcgtggtcagctccggcgatctcctcgacgtccgtgccagggc 4096

                                                                        
Query: 362  ttagcgtcaccatccagcgctgcatctcctctgtgctggagccatcagccttggctacca 421
            | | || ||||||||| |||||||||||||| ||||||||||  ||||||||||| | ||
Sbjct: 4095 tcatcgccaccatccaccgctgcatctcctcggtgctggagctgtcagccttggcgatca 4036

                                                                        
Query: 422  catataccttcttcacagacccatatttgtctgcggtgagcaggcatgcatccttcatca 481
            | || ||||||||||| || ||||| ||| |   |||||||| ||   |||| |||||||
Sbjct: 4035 cgtacaccttcttcaccgatccatagttgccattggtgagcaagctctcatctttcatca 3976

                                                                        
Query: 482  ccggatcatccaggaactggtttccaggcctcaccaacattttcgccagggccaaatcct 541
            |||||||||||| |||||| || ||||| ||||||| ||| |||||||| |||| |||||
Sbjct: 3975 ccggatcatccatgaactgattgccaggtctcaccagcatcttcgccagtgccagatcct 3916
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  167 bits (84), Expect = 5e-38
 Identities = 201/240 (83%)
 Strand = Plus / Plus

                                                                            
Query: 302      gcttggagctcatgctggcatggtcagctccagcaatctcctcgacctctgtgccagggc 361
                |||||||| |||||  ||| ||||||||||| || ||||||||||| || ||||||||||
Sbjct: 40996853 gcttggagttcatgacggcgtggtcagctccggcgatctcctcgacgtccgtgccagggc 40996912

                                                                            
Query: 362      ttagcgtcaccatccagcgctgcatctcctctgtgctggagccatcagccttggctacca 421
                | | || ||||||||| |||||||||||||| ||||||||||  ||||||||||| | ||
Sbjct: 40996913 tcatcgccaccatccaccgctgcatctcctcggtgctggagctgtcagccttggcgatca 40996972

                                                                            
Query: 422      catataccttcttcacagacccatatttgtctgcggtgagcaggcatgcatccttcatca 481
                | || ||||||||||| || ||||| ||| |   |||||||| ||   |||| |||||||
Sbjct: 40996973 cgtacaccttcttcaccgatccatagttgccattggtgagcaagctctcatctttcatca 40997032

                                                                            
Query: 482      ccggatcatccaggaactggtttccaggcctcaccaacattttcgccagggccaaatcct 541
                |||||||||||| |||||| || ||||| ||||||| ||| |||||||| |||| |||||
Sbjct: 40997033 ccggatcatccatgaactgattgccaggtctcaccagcatcttcgccagtgccagatcct 40997092



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                            
Query: 470      catccttcatcaccggatcatccaggaactggtttccaggcctcaccaacattttcgcca 529
                |||||||||||| |||||||||| |||||||| | |||||  ||| ||| | ||| ||||
Sbjct: 40992399 catccttcatcatcggatcatcctggaactggctgccaggtgtcatcaataattttgcca 40992458

                            
Query: 530      gggccaaatcct 541
                ||| ||||||||
Sbjct: 40992459 gggtcaaatcct 40992470



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 322      tggtcagctccagcaatctcctcgacctctgtgccagggct 362
                ||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 40992257 tggtcggctccagcaatctcctcgacttccgtgcccgggct 40992297
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>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0492G09
          Length = 142239

 Score =  167 bits (84), Expect = 5e-38
 Identities = 201/240 (83%)
 Strand = Plus / Plus

                                                                         
Query: 302   gcttggagctcatgctggcatggtcagctccagcaatctcctcgacctctgtgccagggc 361
             |||||||| |||||  ||| ||||||||||| || ||||||||||| || ||||||||||
Sbjct: 33783 gcttggagttcatgacggcgtggtcagctccggcgatctcctcgacgtccgtgccagggc 33842

                                                                         
Query: 362   ttagcgtcaccatccagcgctgcatctcctctgtgctggagccatcagccttggctacca 421
             | | || ||||||||| |||||||||||||| ||||||||||  ||||||||||| | ||
Sbjct: 33843 tcatcgccaccatccaccgctgcatctcctcggtgctggagctgtcagccttggcgatca 33902

                                                                         
Query: 422   catataccttcttcacagacccatatttgtctgcggtgagcaggcatgcatccttcatca 481
             | || ||||||||||| || ||||| ||| |   |||||||| ||   |||| |||||||
Sbjct: 33903 cgtacaccttcttcaccgatccatagttgccattggtgagcaagctctcatctttcatca 33962

                                                                         
Query: 482   ccggatcatccaggaactggtttccaggcctcaccaacattttcgccagggccaaatcct 541
             |||||||||||| |||||| || ||||| ||||||| ||| |||||||| |||| |||||
Sbjct: 33963 ccggatcatccatgaactgattgccaggtctcaccagcatcttcgccagtgccagatcct 34022



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 470   catccttcatcaccggatcatccaggaactggtttccaggcctcaccaacattttcgcca 529
             |||||||||||| |||||||||| |||||||| | |||||  ||| ||| | ||| ||||
Sbjct: 29329 catccttcatcatcggatcatcctggaactggctgccaggtgtcatcaataattttgcca 29388

                         
Query: 530   gggccaaatcct 541
             ||| ||||||||
Sbjct: 29389 gggtcaaatcct 29400



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 322   tggtcagctccagcaatctcctcgacctctgtgccagggct 362
             ||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 29187 tggtcggctccagcaatctcctcgacttccgtgcccgggct 29227
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>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0423A12
          Length = 178649

 Score =  167 bits (84), Expect = 5e-38
 Identities = 201/240 (83%)
 Strand = Plus / Plus

                                                                          
Query: 302    gcttggagctcatgctggcatggtcagctccagcaatctcctcgacctctgtgccagggc 361
              |||||||| |||||  ||| ||||||||||| || ||||||||||| || ||||||||||
Sbjct: 125278 gcttggagttcatgacggcgtggtcagctccggcgatctcctcgacgtccgtgccagggc 125337

                                                                          
Query: 362    ttagcgtcaccatccagcgctgcatctcctctgtgctggagccatcagccttggctacca 421
              | | || ||||||||| |||||||||||||| ||||||||||  ||||||||||| | ||
Sbjct: 125338 tcatcgccaccatccaccgctgcatctcctcggtgctggagctgtcagccttggcgatca 125397

                                                                          
Query: 422    catataccttcttcacagacccatatttgtctgcggtgagcaggcatgcatccttcatca 481
              | || ||||||||||| || ||||| ||| |   |||||||| ||   |||| |||||||
Sbjct: 125398 cgtacaccttcttcaccgatccatagttgccattggtgagcaagctctcatctttcatca 125457

                                                                          
Query: 482    ccggatcatccaggaactggtttccaggcctcaccaacattttcgccagggccaaatcct 541
              |||||||||||| |||||| || ||||| ||||||| ||| |||||||| |||| |||||
Sbjct: 125458 ccggatcatccatgaactgattgccaggtctcaccagcatcttcgccagtgccagatcct 125517



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                          
Query: 470    catccttcatcaccggatcatccaggaactggtttccaggcctcaccaacattttcgcca 529
              |||||||||||| |||||||||| |||||||| | |||||  ||| ||| | ||| ||||
Sbjct: 120824 catccttcatcatcggatcatcctggaactggctgccaggtgtcatcaataattttgcca 120883

                          
Query: 530    gggccaaatcct 541
              ||| ||||||||
Sbjct: 120884 gggtcaaatcct 120895



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 322    tggtcagctccagcaatctcctcgacctctgtgccagggct 362
              ||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 120682 tggtcggctccagcaatctcctcgacttccgtgcccgggct 120722
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>dbj|AK073211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033014N13, full
            insert sequence
          Length = 2411

 Score =  167 bits (84), Expect = 5e-38
 Identities = 201/240 (83%)
 Strand = Plus / Plus

                                                                        
Query: 302  gcttggagctcatgctggcatggtcagctccagcaatctcctcgacctctgtgccagggc 361
            |||||||| |||||  ||| ||||||||||| || ||||||||||| || ||||||||||
Sbjct: 2057 gcttggagttcatgacggcgtggtcagctccggcgatctcctcgacgtccgtgccagggc 2116

                                                                        
Query: 362  ttagcgtcaccatccagcgctgcatctcctctgtgctggagccatcagccttggctacca 421
            | | || ||||||||| |||||||||||||| ||||||||||  ||||||||||| | ||
Sbjct: 2117 tcatcgccaccatccaccgctgcatctcctcggtgctggagctgtcagccttggcgatca 2176

                                                                        
Query: 422  catataccttcttcacagacccatatttgtctgcggtgagcaggcatgcatccttcatca 481
            | || ||||||||||| || ||||| ||| |   |||||||| ||   |||| |||||||
Sbjct: 2177 cgtacaccttcttcaccgatccatagttgccattggtgagcaagctctcatctttcatca 2236

                                                                        
Query: 482  ccggatcatccaggaactggtttccaggcctcaccaacattttcgccagggccaaatcct 541
            |||||||||||| |||||| || ||||| ||||||| ||| |||||||| |||| |||||
Sbjct: 2237 ccggatcatccatgaactgattgccaggtctcaccagcatcttcgccagtgccagatcct 2296



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 322 tggtcagctccagcaatctcctcgacctctgtgccagggct 362
           ||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 465 tggtcggctccagcaatctcctcgacttccgtgcccgggct 505
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>dbj|AK099792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E21, full
           insert sequence
          Length = 4332

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 470 catccttcatcaccggatcatccaggaactggtttccaggcctcaccaacattttcgcca 529
           |||||||||||| |||||||||| |||||||| | |||||  ||| ||| | ||| ||||
Sbjct: 597 catccttcatcatcggatcatcctggaactggctgccaggtgtcatcaataattttgcca 656

                       
Query: 530 gggccaaatcct 541
           ||| ||||||||
Sbjct: 657 gggtcaaatcct 668



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 322 tggtcagctccagcaatctcctcgacctctgtgccagggct 362
           ||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 455 tggtcggctccagcaatctcctcgacttccgtgcccgggct 495
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>emb|AL663098.8| Mouse DNA sequence from clone RP23-24L23 on chromosome X, complete
              sequence
          Length = 227133

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 423    atataccttcttcacagaccca 444
              ||||||||||||||||||||||
Sbjct: 147244 atataccttcttcacagaccca 147265
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>gb|AC158594.12| Mus musculus 10 BAC RP23-197I5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 218257

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 130    catatgaatacatctagcatacaaattta 158
              |||||||||||| ||||||||||| ||||
Sbjct: 137538 catatgaatacaactagcatacaatttta 137566
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>gb|AC131743.3| Mus musculus BAC clone RP23-68K21 from chromosome 13, complete sequence
          Length = 235930

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 370    accatccagcgctgcatctcctctgtgct 398
              ||||| || ||||||||||||||||||||
Sbjct: 164927 accatgcatcgctgcatctcctctgtgct 164955
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>emb|CR855956.1| Paramecium tetraurelia macronuclear, putative gene for
           cGMP-dependent protein kinase 12, isoform 1, complete
           gene
          Length = 2850

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 239 tcccaacttactatatattta 259
           |||||||||||||||||||||
Sbjct: 37  tcccaacttactatatattta 17
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>gb|AC130307.3| Homo sapiens chromosome 11, clone RP11-15D10, complete sequence
          Length = 159817

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 165    acacacatatccagaggtaat 185
              |||||||||||||||||||||
Sbjct: 142167 acacacatatccagaggtaat 142147
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>gb|AC121901.2| Mus musculus BAC clone RP24-168D2 from 6, complete sequence
          Length = 140714

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 130  catatgaatacatctagcata 150
            |||||||||||||||||||||
Sbjct: 8155 catatgaatacatctagcata 8175
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>gb|AC153523.7| Mus musculus 10 BAC RP23-463C2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200141

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 130    catatgaatacatctagcatacaaattta 158
              |||||||||||| ||||||||||| ||||
Sbjct: 182530 catatgaatacaactagcatacaatttta 182502
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>gb|AC115082.3| Homo sapiens chromosome 11, clone CTD-2386P16, complete sequence
          Length = 99781

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 165   acacacatatccagaggtaat 185
             |||||||||||||||||||||
Sbjct: 43601 acacacatatccagaggtaat 43621
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>gb|AC096651.1| Homo sapiens BAC clone RP11-16J15 from 4, complete sequence
          Length = 158661

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 239  tcccaacttactatatattta 259
            |||||||||||||||||||||
Sbjct: 5640 tcccaacttactatatattta 5660
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>gb|AC108940.3| Homo sapiens BAC clone RP11-728F4 from 2, complete sequence
          Length = 126219

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   tatatgtcatacatatgaata 139
             |||||||||||||||||||||
Sbjct: 21070 tatatgtcatacatatgaata 21090
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>gb|AC068769.19| Homo sapiens 3 BAC RP11-14I2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191246

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 14     aactcaagtgtttattagatgaaat 38
              ||||||||| |||||||||||||||
Sbjct: 137070 aactcaagtatttattagatgaaat 137094
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>gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, complete sequence
          Length = 186744

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   acacacatatccagaggtaat 185
             |||||||||||||||||||||
Sbjct: 12840 acacacatatccagaggtaat 12820
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>emb|BX897744.17| Zebrafish DNA sequence from clone DKEY-168A10 in linkage group 3,
              complete sequence
          Length = 144823

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    atcacaaagctccttgtgctt 305
              |||||||||||||||||||||
Sbjct: 109104 atcacaaagctccttgtgctt 109124
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>gb|AC171002.2| Mus musculus BAC clone RP23-145F22 from chromosome 6, complete sequence
          Length = 186846

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 130   catatgaatacatctagcata 150
             |||||||||||||||||||||
Sbjct: 46968 catatgaatacatctagcata 46948
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>gb|AC102892.9| Mus musculus chromosome 5, clone RP24-362B10, complete sequence
          Length = 158043

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    ttggagctcatgctggcatg 323
              ||||||||||||||||||||
Sbjct: 138326 ttggagctcatgctggcatg 138345
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>ref|NM_127925.2| Arabidopsis thaliana catalytic/ hydrolase, acting on ester bonds
           AT2G23610 mRNA, complete cds
          Length = 1152

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 cctcaccaacattttcgcca 529
           ||||||||||||||||||||
Sbjct: 669 cctcaccaacattttcgcca 650
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>gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, complete sequence
          Length = 226006

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   ttggagctcatgctggcatg 323
             ||||||||||||||||||||
Sbjct: 97782 ttggagctcatgctggcatg 97801
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>gb|BT014901.1| Arabidopsis thaliana At2g23610 gene, complete cds
          Length = 878

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 cctcaccaacattttcgcca 529
           ||||||||||||||||||||
Sbjct: 547 cctcaccaacattttcgcca 528
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>gb|BT015031.1| Arabidopsis thaliana At2g23610 mRNA, complete cds
          Length = 792

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 cctcaccaacattttcgcca 529
           ||||||||||||||||||||
Sbjct: 540 cctcaccaacattttcgcca 521
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>gb|AC125531.3| Mus musculus BAC clone RP23-396D12 from chromosome 10, complete
             sequence
          Length = 219818

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   tagatttctagacacatata 122
             ||||||||||||||||||||
Sbjct: 60703 tagatttctagacacatata 60722
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>gb|AC156606.12| Mus musculus chromosome 7, clone RP23-78N8, complete sequence
          Length = 200034

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 114  acacatatatgtcatacatatgaa 137
            |||||||||||| |||||||||||
Sbjct: 6592 acacatatatgttatacatatgaa 6569
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>emb|AL355580.13| Human DNA sequence from clone RP11-76K10 on chromosome 13 Contains the
             3' end of a novel gene, complete sequence
          Length = 179497

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   acacatatatgtcatacata 133
             ||||||||||||||||||||
Sbjct: 66571 acacatatatgtcatacata 66590
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>emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chromosome 10 Contains a
             ribosomal protein S3A (RPS3A) pseudogene, the PYCS gene
             for pyrroline-5-carboxylate synthetase (glutamate
             gamma-semialdehyde synthetase) (GSAS, P5CS), the gene for
             a novel protein (DKFZP564D116, FLJ40976), the 5' end of
             the ENTPD1 gene for ectonucleoside triphosphate
             diphosphohydrolase 1 and two CpG islands, complete
             sequence
          Length = 163166

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   taaatatattaaacccatga 204
             ||||||||||||||||||||
Sbjct: 21172 taaatatattaaacccatga 21153



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   taaatatattaaacccatga 204
             ||||||||||||||||||||
Sbjct: 19921 taaatatattaaacccatga 19940
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>emb|AL139274.17| Human DNA sequence from clone RP11-393I2 on chromosome 6 Contains a
            reticulocalbin 1, EF-hand calcium binding domain (RCN1)
            pseudogene, a novel gene, a novel pseudogene, the gene
            for a novel zinc finger protein (C2H2 type) and 3 CpG
            islands, complete sequence
          Length = 163481

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 113  gacacatatatgtcatacatatga 136
            ||||||||||||||||| ||||||
Sbjct: 8106 gacacatatatgtcatatatatga 8083
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>gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, complete sequence
          Length = 195494

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    aactggtttccaggcctcac 515
              ||||||||||||||||||||
Sbjct: 166241 aactggtttccaggcctcac 166222
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>gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence
          Length = 185378

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   aactggtttccaggcctcac 515
             ||||||||||||||||||||
Sbjct: 45347 aactggtttccaggcctcac 45328
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>emb|BX324115.8| Zebrafish DNA sequence from clone DKEYP-70E6, complete sequence
          Length = 202547

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    catacatatgaatacatcta 145
              ||||||||||||||||||||
Sbjct: 201056 catacatatgaatacatcta 201037
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>gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map CIC06C07, complete
             sequence
          Length = 123360

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   cctcaccaacattttcgcca 529
             ||||||||||||||||||||
Sbjct: 96027 cctcaccaacattttcgcca 96046
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>gb|AC160123.2| Mus musculus BAC clone RP23-354J5 from chromosome 9, complete sequence
          Length = 199457

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 487    tcatccaggaactggtttcc 506
              ||||||||||||||||||||
Sbjct: 113509 tcatccaggaactggtttcc 113490
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>emb|BX821370.1|CNS0A981 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL37ZB05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 911

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 cctcaccaacattttcgcca 529
           ||||||||||||||||||||
Sbjct: 565 cctcaccaacattttcgcca 546
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>emb|BX004868.9| Zebrafish DNA sequence from clone DKEY-209F8, complete sequence
          Length = 153986

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tcaagtgtttattagatgaa 36
             ||||||||||||||||||||
Sbjct: 43716 tcaagtgtttattagatgaa 43735
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>emb|BX000487.7| Zebrafish DNA sequence from clone BUSM1-162F22 in linkage group 20,
             complete sequence
          Length = 105024

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   catacatatgaatacatcta 145
             ||||||||||||||||||||
Sbjct: 23794 catacatatgaatacatcta 23775
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>emb|CR354391.7| Zebrafish DNA sequence from clone CH211-256L9 in linkage group 20,
           complete sequence
          Length = 92464

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 catacatatgaatacatcta 145
           ||||||||||||||||||||
Sbjct: 509 catacatatgaatacatcta 490
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>dbj|AP001695.1| Homo sapiens genomic DNA, chromosome 21q, section 39/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 119    tatatgtcatacatatgaatacat 142
              ||||| ||||||||||||||||||
Sbjct: 281419 tatatatcatacatatgaatacat 281396
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>gb|AC110885.14| Mus musculus chromosome 7, clone RP24-342P18, complete sequence
          Length = 223826

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 114    acacatatatgtcatacatatgaa 137
              |||||||||||| |||||||||||
Sbjct: 191809 acacatatatgttatacatatgaa 191786
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>gb|AC138151.3| Mus musculus BAC clone RP24-294E11 from 7, complete sequence
          Length = 203368

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 171    atatccagaggtaataaatatatt 194
              |||||||||| |||||||||||||
Sbjct: 163319 atatccagagataataaatatatt 163342
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>emb|CT030173.7| Mouse DNA sequence from clone RP24-264B23 on chromosome 12, complete
             sequence
          Length = 156510

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 202   tgatacatgattttatttcaaaca 225
             |||||||||| |||||||||||||
Sbjct: 61506 tgatacatgaatttatttcaaaca 61483
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>emb|AL109967.2|HS22F01 Homo sapiens chromosome 21 PAC LLNCO21F0122, complete sequence
          Length = 123631

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   tatatgtcatacatatgaatacat 142
             ||||| ||||||||||||||||||
Sbjct: 46189 tatatatcatacatatgaatacat 46166
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>dbj|AP000229.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:T1539,
             LL56-APP region, complete sequence
          Length = 35143

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   tatatgtcatacatatgaatacat 142
             ||||| ||||||||||||||||||
Sbjct: 33655 tatatatcatacatatgaatacat 33632
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>dbj|AP000144.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone
             B2291C14-R44F3, segment 9/10, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   tatatgtcatacatatgaatacat 142
             ||||| ||||||||||||||||||
Sbjct: 16141 tatatatcatacatatgaatacat 16118
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>dbj|AP001594.1| Homo sapiens genomic DNA, chromosome 21, clone:KB580H10, APP-D21S292
             region, complete sequence
          Length = 100634

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   tatatgtcatacatatgaatacat 142
             ||||| ||||||||||||||||||
Sbjct: 86799 tatatatcatacatatgaatacat 86776


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,975,797
Number of Sequences: 3902068
Number of extensions: 5975797
Number of successful extensions: 118865
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118713
Number of HSP's gapped (non-prelim): 145
length of query: 550
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 527
effective length of database: 17,143,297,704
effective search space: 9034517890008
effective search space used: 9034517890008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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