ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PER24_ARATH (Q9ZV04) Peroxidase 24 precursor (EC 1.11.1.7) (Atpe... 43 6e-04
2PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atpe... 40 0.004
3PER39_ARATH (Q9SUT2) Peroxidase 39 precursor (EC 1.11.1.7) (Atpe... 37 0.041
4PER36_ARATH (Q9SD46) Peroxidase 36 precursor (EC 1.11.1.7) (Atpe... 36 0.053
5Q300_MOUSE (Q02722) Protein Q300 32 1.3
6PER65_ARATH (Q9FJR1) Peroxidase 65 precursor (EC 1.11.1.7) (Atpe... 32 1.3
7ANKK1_MOUSE (Q8BZ25) Ankyrin repeat and protein kinase domain-co... 30 3.8
8SNX9_HUMAN (Q9Y5X1) Sorting nexin-9 (SH3 and PX domain-containin... 30 3.8
9PER8_ARATH (Q9LNL0) Peroxidase 8 precursor (EC 1.11.1.7) (Atpero... 30 3.8
10CR023_HUMAN (Q8NB54) Protein C18orf23 30 5.0
11GLGA_THIDA (Q3SH79) Glycogen synthase (EC 2.4.1.21) (Starch [bac... 30 5.0
12PER41_ARATH (O23609) Peroxidase 41 precursor (EC 1.11.1.7) (Atpe... 30 5.0
13PER52_ARATH (Q9FLC0) Peroxidase 52 precursor (EC 1.11.1.7) (Atpe... 30 5.0
14PER59_ARATH (Q39034) Peroxidase 59 precursor (EC 1.11.1.7) (Atpe... 29 6.5
15SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3 29 6.5
16AEGP_RAT (Q63191) Apical endosomal glycoprotein precursor 29 6.5
17PER15_ARATH (Q9SI16) Peroxidase 15 precursor (EC 1.11.1.7) (Atpe... 29 6.5
18PER14_ARATH (Q9SI17) Peroxidase 14 precursor (EC 1.11.1.7) (Atpe... 29 8.5
19PER43_ARATH (Q9SZH2) Peroxidase 43 precursor (EC 1.11.1.7) (Atpe... 29 8.5

>PER24_ARATH (Q9ZV04) Peroxidase 24 precursor (EC 1.11.1.7) (Atperox P24)|
           (ATP47)
          Length = 350

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 27/65 (41%), Positives = 36/65 (55%)
 Frame = -2

Query: 386 HKVLFTSDAVLNSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKV 207
           +K LFTSDA L +  +   +      +GA+  +F  +M  M  I V T+GD QG EIRK 
Sbjct: 287 NKGLFTSDAALLTDPSAAHIASVFQNSGAFLAQFGRSMIKMSSIKVLTLGD-QGGEIRKN 345

Query: 206 CWRVN 192
           C  VN
Sbjct: 346 CRLVN 350



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>PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atperox P55)|
           (ATP20a)
          Length = 330

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = -2

Query: 383 KVLFTSD-AVLNSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKV 207
           K LFTSD A+ N   +   V   AN A  +   F SAM N+G++GVK +G+Q   EIR+ 
Sbjct: 269 KGLFTSDQALFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVK-VGNQ--GEIRRD 325

Query: 206 CWRVN 192
           C   N
Sbjct: 326 CSAFN 330



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>PER39_ARATH (Q9SUT2) Peroxidase 39 precursor (EC 1.11.1.7) (Atperox P39)|
           (ATP19a)
          Length = 326

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = -2

Query: 377 LFTSDAVLNSTETITQVTENANVAGAWERKF----ESAMENMGKIGVKTMGDQQGAEIRK 210
           LF SDA L  T     + +    AG  E++F     ++ME MG+IGVKT  D    EIR+
Sbjct: 266 LFESDAAL--TMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSD---GEIRR 320

Query: 209 VCWRVN 192
            C  VN
Sbjct: 321 TCAFVN 326



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>PER36_ARATH (Q9SD46) Peroxidase 36 precursor (EC 1.11.1.7) (Atperox P36)|
          Length = 336

 Score = 36.2 bits (82), Expect = 0.053
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = -2

Query: 377 LFTSDAVL--NSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVC 204
           L +SD +L   S ET+  V   A   GA+  +F  +M  MG I   T  D    EIR++C
Sbjct: 273 LLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTD---GEIRRIC 329

Query: 203 WRVNN 189
            RVN+
Sbjct: 330 RRVNH 334



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>Q300_MOUSE (Q02722) Protein Q300|
          Length = 77

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 90 WFSYTKIMYACVCQCVCLFRCI 25
          W   T + Y CVC CVC+  C+
Sbjct: 18 WEGETNLFYVCVCVCVCVCVCV 39



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>PER65_ARATH (Q9FJR1) Peroxidase 65 precursor (EC 1.11.1.7) (Atperox P65)|
           (ATP43)
          Length = 334

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -2

Query: 377 LFTSDAVL---NSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKV 207
           L  SD +L   NST+    +   A    A+   F  AME +G +GVK  GD+ G E+R+ 
Sbjct: 271 LLASDHILIKDNSTKPFVDLY--ATNETAFFEDFARAMEKLGTVGVK--GDKDG-EVRRR 325

Query: 206 CWRVNN 189
           C   NN
Sbjct: 326 CDHFNN 331



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>ANKK1_MOUSE (Q8BZ25) Ankyrin repeat and protein kinase domain-containing|
           protein 1 (EC 2.7.11.1)
          Length = 745

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 165 ATEY*PALVVDSPAYLPDLCALLVSHGLDPDFA 263
           A+ Y P L+       PDLCALL++HG D + A
Sbjct: 401 ASGYTPLLIATQDQQ-PDLCALLLAHGADTNLA 432



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>SNX9_HUMAN (Q9Y5X1) Sorting nexin-9 (SH3 and PX domain-containing protein 1)|
           (SDP1 protein)
          Length = 595

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -3

Query: 292 GSSRVPWRIWAKSGSRPWETSK---AQRSGRYAGESTTNAGQYSVA 164
           GS   PW  W+ S S  WE+S+   AQ  G  A  +T     +  A
Sbjct: 102 GSGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWDTA 147



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>PER8_ARATH (Q9LNL0) Peroxidase 8 precursor (EC 1.11.1.7) (Atperox P8)|
          Length = 310

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = -2

Query: 380 VLFTSDAVLNSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVCW 201
           +L   D ++    T + V++ A     ++  F  AM+ MG+IGV T GD    EIR  C 
Sbjct: 250 ILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLT-GD--SGEIRTNCR 306

Query: 200 RVNN 189
             NN
Sbjct: 307 AFNN 310



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>CR023_HUMAN (Q8NB54) Protein C18orf23|
          Length = 160

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = -1

Query: 99  CRCW---FSYTKIMYACVCQCVCLFRCI 25
           C C    ++ ++ + ACVC CVCL+ C+
Sbjct: 42  CLCMTVAYTGSRCLGACVCVCVCLYVCV 69



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>GLGA_THIDA (Q3SH79) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase)
          Length = 493

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
 Frame = +3

Query: 123 HRGIR-HGAGQLPRIATEY*PALVVDSPAYLPDLCALLVSHGLD---PDFAHILHGTL 284
           H G+  HG   + +    Y  A+   SP Y  ++C     +GLD       H LHG L
Sbjct: 193 HEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGLDGLLRSRRHKLHGIL 250



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>PER41_ARATH (O23609) Peroxidase 41 precursor (EC 1.11.1.7) (Atperox P41)|
          Length = 326

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -2

Query: 377 LFTSDAVLNSTETITQVTE-NANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVCW 201
           L  SD +L    +     E  AN   A+   F  AME +G++GVK  G++ G E+R+ C 
Sbjct: 263 LLASDHILFKDPSTRPFVELYANNQTAFFEDFARAMEKLGRVGVK--GEKDG-EVRRRCD 319

Query: 200 RVN 192
             N
Sbjct: 320 HFN 322



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>PER52_ARATH (Q9FLC0) Peroxidase 52 precursor (EC 1.11.1.7) (Atperox P52)|
           (ATP49)
          Length = 324

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -2

Query: 377 LFTSDAVL-NSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVCW 201
           L  SD VL N   T + V   +N   ++   F +AM  MG I   T       EIRKVC 
Sbjct: 265 LLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLT---GSSGEIRKVCG 321

Query: 200 RVN 192
           R N
Sbjct: 322 RTN 324



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>PER59_ARATH (Q39034) Peroxidase 59 precursor (EC 1.11.1.7) (Atperox P59)|
           (Peroxidase N) (ATPN)
          Length = 328

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = -2

Query: 383 KVLFTSDAVLNSTETITQVTENANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKVC 204
           ++LF+SD  +N+T+ + +    +     + R F  AM  MG I     G     E+R  C
Sbjct: 271 QILFSSDLAVNTTKKLVEAYSRSQ--SLFFRDFTCAMIRMGNISNGASG-----EVRTNC 323

Query: 203 WRVNN 189
             +NN
Sbjct: 324 RVINN 328



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>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3|
          Length = 465

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 93  CWF--SYTKIMYACVCQCVCLFRCI-INK*LCVF 1
           CW+  S    +  CVC CVC++ C+ + +  CV+
Sbjct: 362 CWYLCSILSSVCVCVCVCVCMYVCMCVMESACVY 395



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>AEGP_RAT (Q63191) Apical endosomal glycoprotein precursor|
          Length = 1216

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -3

Query: 253 GSRPWETSKAQRSGRYAGESTTNAGQYSVAMRGSW 149
           G   W+ ++AQ SG+ A ++  NA  + +++R +W
Sbjct: 508 GKLQWQRAEAQESGKPARDTNRNAPGHFLSLRKAW 542



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>PER15_ARATH (Q9SI16) Peroxidase 15 precursor (EC 1.11.1.7) (Atperox P15)|
           (ATP36)
          Length = 338

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
 Frame = -2

Query: 428 PRRSG*AVLSECD*H----------KVLFTSDAVLNSTETITQVTENAN-----VAGAWE 294
           PR  G   LSE D +          K L  +  +LNS E +    E +       A   E
Sbjct: 243 PRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQE 302

Query: 293 RKFESAMENMGKIGVKTMGDQQGAEIRKVCWRVNN 189
             FE   E+M K+G  +       EIRK C ++NN
Sbjct: 303 EFFEQFAESMIKMGNISPLTGSSGEIRKNCRKINN 337



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>PER14_ARATH (Q9SI17) Peroxidase 14 precursor (EC 1.11.1.7) (Atperox P14)|
          Length = 337

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
 Frame = -2

Query: 428 PRRSG*AVLSECD*H----------KVLFTSDAVLNSTETITQVTENAN-----VAGAWE 294
           PR  G   LSE D +          K L  +  +LNS + +    E +       A   E
Sbjct: 242 PRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYAEDQE 301

Query: 293 RKFESAMENMGKIGVKTMGDQQGAEIRKVCWRVNN 189
             FE   E+M K+G  +       EIRK C ++NN
Sbjct: 302 EFFEQFAESMIKMGKISPLTGSSGEIRKKCRKINN 336



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>PER43_ARATH (Q9SZH2) Peroxidase 43 precursor (EC 1.11.1.7) (Atperox P43)|
          Length = 326

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
 Frame = -2

Query: 368 SDAVLNSTETITQVTE------NANVAGAWERKFESAMENMGKIGVKTMGDQQGAEIRKV 207
           +DA L    T  QV +      N      +E  F  A+  MGKIGVKT       EIR+V
Sbjct: 265 TDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKT---GFKGEIRRV 321

Query: 206 CWRVN 192
           C   N
Sbjct: 322 CSAFN 326


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,646,719
Number of Sequences: 219361
Number of extensions: 1262364
Number of successful extensions: 3342
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3334
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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