ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart40f02 |
|---|---|
| Clone Library Name | barley_pub |
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 98.2 bits (243), Expect = 7e-21 Identities = 47/56 (83%), Positives = 51/56 (91%) Frame = -1 Query: 423 LGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 L L G +G+Y+PDTEKLERLK+AEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL Sbjct: 201 LALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 98.2 bits (243), Expect = 7e-21 Identities = 47/56 (83%), Positives = 51/56 (91%) Frame = -1 Query: 423 LGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 L L G +G+Y+PDTEKLERLKVAEIKH+RLAMLAMLIFYFEAGQGKTPLGALGL Sbjct: 201 LALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 256
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 93.6 bits (231), Expect = 2e-19 Identities = 45/56 (80%), Positives = 50/56 (89%) Frame = -1 Query: 423 LGLGGETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 L L G +G+Y PDT+KLERLK+AEIKH+RLAMLAMLIFYFEAGQGKTPLGALGL Sbjct: 206 LSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 261
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 45.8 bits (107), Expect = 4e-05 Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEAG-QGKTPLGAL 262 D EKL+ LK+AEIKHSRLAM+A LIF +A GK P+ L Sbjct: 231 DPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFL 271
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 37.7 bits (86), Expect = 0.011 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFE-AGQGKTPL 271 D EK +L++AEIKH+RLAM+A L F + A GK PL Sbjct: 231 DPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPL 268
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 34.3 bits (77), Expect = 0.12 Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D IY D E L LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 173 GEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 230
>FCPB_PHATR (Q08585) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 198 Score = 34.3 bits (77), Expect = 0.12 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 7/42 (16%) Frame = -1 Query: 417 LGGETKDGIYIP-------DTEKLERLKVAEIKHSRLAMLAM 313 LG + G Y P D EK +RL+ EIKH R++MLA+ Sbjct: 37 LGAQAPLGFYDPLGLVADGDQEKFDRLRYVEIKHGRISMLAV 78
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 33.9 bits (76), Expect = 0.16 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIYI----------PDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D +Y+ D E+ LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 181 GEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 238
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 33.9 bits (76), Expect = 0.16 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPLGAL 262 D E+ RLK AEIKH+RLAM++ + +A G+ LG+L Sbjct: 226 DEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSL 266
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 33.9 bits (76), Expect = 0.16 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE +D +Y + D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 41 GEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 98
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 33.5 bits (75), Expect = 0.21 Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D IY D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 162 GEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 219
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 33.5 bits (75), Expect = 0.21 Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA---GQGKTPLGALGL*DDF 244 D E+ LKV EIK+ RLAM AML F+ +A G+G A L D F Sbjct: 214 DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPF 262
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 33.1 bits (74), Expect = 0.27 Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFE-AGQGKTPL 271 D K +L++AEIKH+RLAM+ L F + A GK PL Sbjct: 228 DPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPL 265
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 33.1 bits (74), Expect = 0.27 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPLGAL 262 D E LKV EIK+ RLAM +M F+ +A GK PL L Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNL 244
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 33.1 bits (74), Expect = 0.27 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 201 DAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 238
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 33.1 bits (74), Expect = 0.27 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 7/44 (15%) Frame = -1 Query: 423 LGLGGETKDGIYIP-------DTEKLERLKVAEIKHSRLAMLAM 313 L +G + G + P D E+ ERL+ E+KH R+AMLA+ Sbjct: 8 LEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAI 51
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 33.1 bits (74), Expect = 0.27 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 9/49 (18%) Frame = -1 Query: 411 GETKDGIY---------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA 292 GE D +Y DTE LKV E+K+ RLAM +M F+ +A Sbjct: 186 GEVTDPLYPGSFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQA 234
>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor Length = 197 Score = 33.1 bits (74), Expect = 0.27 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%) Frame = -1 Query: 417 LGGETKDGIYIP-------DTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 274 LG + G + P D EK +RL+ EIKH R++MLA++ + + + P Sbjct: 37 LGAQPPLGFFDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLP 91
>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 197 Score = 33.1 bits (74), Expect = 0.27 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%) Frame = -1 Query: 417 LGGETKDGIYIP-------DTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 274 LG + G + P D EK +RL+ EIKH R++MLA++ + + + P Sbjct: 37 LGAQPPLGFFDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLP 91
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 32.7 bits (73), Expect = 0.36 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D IY D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 123 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 180
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 32.7 bits (73), Expect = 0.36 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D IY D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 172 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 229
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPL 240
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 217 Score = 32.7 bits (73), Expect = 0.36 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAM 313 D E+ ERL+ E+KH R+AMLA+ Sbjct: 64 DQERFERLRYVEVKHGRIAMLAI 86
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 32.7 bits (73), Expect = 0.36 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D IY D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 191 GEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 248
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 32.7 bits (73), Expect = 0.36 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAM 313 D E+ ERL+ E+KH R+AMLA+ Sbjct: 58 DQERFERLRYVEVKHGRIAMLAI 80
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 32.7 bits (73), Expect = 0.36 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE +D IY D E LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 182 GEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 32.7 bits (73), Expect = 0.36 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D IY D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 180 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 237
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 198 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 235
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 53 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 90
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 212 Score = 32.3 bits (72), Expect = 0.46 Identities = 13/24 (54%), Positives = 19/24 (79%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAML 310 D E+ +RL+ EIKH R+AMLA++ Sbjct: 59 DQERFDRLRYVEIKHGRIAMLAVV 82
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 32.3 bits (72), Expect = 0.46 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E+ LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 201 DPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 238
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 32.3 bits (72), Expect = 0.46 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K RLAML+M F+ +A GK PL Sbjct: 202 DPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPL 239
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 32.3 bits (72), Expect = 0.46 Identities = 14/30 (46%), Positives = 23/30 (76%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA 292 D + ++ LK+ EIK+ RLAMLA+L ++ +A Sbjct: 214 DEKSMKELKLKEIKNGRLAMLAILGYFIQA 243
>FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 197 Score = 32.3 bits (72), Expect = 0.46 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 7/42 (16%) Frame = -1 Query: 417 LGGETKDGIYIP-------DTEKLERLKVAEIKHSRLAMLAM 313 LG + G + P D EK +RL+ EIKH R++MLA+ Sbjct: 37 LGAQPPLGFFDPLGLVADGDQEKFDRLRYVEIKHGRISMLAV 78
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 32.3 bits (72), Expect = 0.46 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D IY D + LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 185 GEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 32.3 bits (72), Expect = 0.46 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = -1 Query: 390 YIPDTEKLERLKVAEIKHSRLAMLAMLIF 304 Y D K E LKV EIK+ RLA+LA++ F Sbjct: 178 YSKDPAKFEELKVKEIKNGRLALLAIVGF 206
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 32.0 bits (71), Expect = 0.61 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 199 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 236
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 32.0 bits (71), Expect = 0.61 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 238
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 32.0 bits (71), Expect = 0.61 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 205 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 242
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.61 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 32.0 bits (71), Expect = 0.61 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 174 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 211
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.61 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.61 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor Length = 197 Score = 32.0 bits (71), Expect = 0.61 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 7/43 (16%) Frame = -1 Query: 417 LGGETKDGIYIP-------DTEKLERLKVAEIKHSRLAMLAML 310 LG + G + P D EK +RL+ E+KH R++MLA++ Sbjct: 37 LGAQPPLGFFDPLGLVADGDQEKFDRLRYVELKHGRISMLAVV 79
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 32.0 bits (71), Expect = 0.61 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 206 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 243
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 31.6 bits (70), Expect = 0.79 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D IY D + LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 195 GEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 252
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 31.6 bits (70), Expect = 0.79 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 203 DPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 240
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 31.6 bits (70), Expect = 0.79 Identities = 16/30 (53%), Positives = 19/30 (63%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA 292 D + LKV EIK+ RLAM ML FY +A Sbjct: 59 DPDTFPELKVKEIKNGRLAMSGMLGFYAQA 88
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 31.2 bits (69), Expect = 1.0 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E K+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPL 241
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 31.2 bits (69), Expect = 1.0 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 241
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 31.2 bits (69), Expect = 1.0 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 241
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 31.2 bits (69), Expect = 1.0 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E L+V EIK+ RLAM +M F+ +A GK PL Sbjct: 203 DPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 31.2 bits (69), Expect = 1.0 Identities = 12/24 (50%), Positives = 19/24 (79%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAML 310 D + ER+++AE+ H RLAMLA++ Sbjct: 33 DPDTFERMRIAEVYHGRLAMLAVV 56 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAML 310 D ER++VAE+ H RL+MLA++ Sbjct: 402 DPVTFERMQVAEVFHCRLSMLALV 425 Score = 28.1 bits (61), Expect = 8.8 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 19/78 (24%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAML----------IFYFEAGQGKTPLG------ALGL*D 250 D + R++VAE+ H RLAML + +FEAG L A+ Sbjct: 218 DPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGKGAWFEAGDSVDGLKLGFITMAIAAPT 277 Query: 249 DFWLARGG---RKGLLHR 205 ++W +GG +KG L R Sbjct: 278 EYWRGQGGFNWQKGELDR 295
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 31.2 bits (69), Expect = 1.0 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLAM A L F+ +A GK P+ Sbjct: 211 DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPI 248
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 31.2 bits (69), Expect = 1.0 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 87 DPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 124
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E LKV IK+ RLAM +M F+ +A GK PL Sbjct: 204 DPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 30.8 bits (68), Expect = 1.4 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Frame = -1 Query: 414 GGETKDGIYIPDTEK-LERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GG+ D + + D LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 190 GGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 30.8 bits (68), Expect = 1.4 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Frame = -1 Query: 414 GGETKDGIYIPDTE-KLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GG+ D + + D LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 193 GGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 202 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = -1 Query: 411 GETKDGIYIPDTEKLERLKVAEIKHSRLAMLAMLIFYFEAGQGKTP 274 G T DG E ++L EIKH R+AMLA + + + GK P Sbjct: 19 GFTADG----SVENFKKLAQTEIKHGRVAMLATMGYITQEITGKLP 60
>EXON_HHV2 (P06489) Alkaline exonuclease (EC 3.1.11.-)| Length = 620 Score = 30.4 bits (67), Expect = 1.8 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -2 Query: 419 ASVARPRTASTSPTPRSLSGSRWPRSSTRASP 324 A+V PR A PT GS WP+S R P Sbjct: 34 ATVFGPRPAPPRPTSPGAPGSHWPQSPPRGQP 65
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 30.4 bits (67), Expect = 1.8 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 202 DPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 239
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 217 Score = 30.0 bits (66), Expect = 2.3 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAM 313 D + ERL+ E+KH R+AMLA+ Sbjct: 64 DQDGFERLRYVEVKHGRIAMLAI 86
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D E +KV E+K+ RLAM +M F+ +A GK PL Sbjct: 202 DPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 239
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV E+K+ RLAM +M F+ +A GK P+ Sbjct: 200 DPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 237
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%) Frame = -1 Query: 360 LKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 29.6 bits (65), Expect = 3.0 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 11/58 (18%) Frame = -1 Query: 411 GETKDGIY----------IPDTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE D IY D + +KV EIK+ RLAM +M F+ +A GK P+ Sbjct: 195 GEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 252
>FCPA_PHATR (Q08584) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 196 Score = 29.6 bits (65), Expect = 3.0 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 375 EKLERLKVAEIKHSRLAMLAM 313 EK +RL+ EIKH R+ MLA+ Sbjct: 58 EKFDRLRYVEIKHGRICMLAV 78
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 381 DTEKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 D + LKV EIK+ RLAM + L F+ +A GK P+ Sbjct: 190 DPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPV 227
>FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 203 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 7/43 (16%) Frame = -1 Query: 417 LGGETKDGIYIP-------DTEKLERLKVAEIKHSRLAMLAML 310 LG + G + P D E+ +RL+ E+KH R+A +A L Sbjct: 36 LGAQPPLGFFDPLGMLADADQERFDRLRYVEVKHGRIAHVAFL 78
>KITH_RHOSI (Q9ZIG2) Thymidine kinase (EC 2.7.1.21)| Length = 213 Score = 29.3 bits (64), Expect = 3.9 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 206 RCNKPFLPPRASQKSSYRPSAPSGVLPCP 292 RC + F PPR + SS + AP+ P P Sbjct: 182 RCRRCFQPPRPTSTSSLKAPAPAATAPRP 210
>RPA2_NEUCR (O74633) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)| (RNA polymerase I subunit 2) Length = 1234 Score = 28.9 bits (63), Expect = 5.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 54 ITWYIRWRKKEYLIPHSIYTRHLKEVTDTD 143 +T+ WRK EYLIP + + L E D + Sbjct: 252 VTFRFSWRKNEYLIPVMMIMKALVETNDRE 281
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 28.9 bits (63), Expect = 5.1 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -1 Query: 411 GETKDGIYIPDT-EKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE+ D + + D + LKV EIK+ RLAM + F+ +A GK P+ Sbjct: 182 GESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPI 230
>HEMH_SYNP6 (Q5N2B2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 387 Score = 28.9 bits (63), Expect = 5.1 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -1 Query: 351 AEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 AE+ + R+AML L E G+ PL ALGL Sbjct: 355 AEVWNGRIAMLGFLALLVELLTGRGPLHALGL 386
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 28.9 bits (63), Expect = 5.1 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -1 Query: 375 EKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 E LKV E+K+ RLAM +M F+ A GK PL Sbjct: 167 EAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPL 202
>EMAL2_HUMAN (O95834) Echinoderm microtubule-associated protein-like 2 (EMAP-2)| (HuEMAP-2) Length = 649 Score = 28.5 bits (62), Expect = 6.7 Identities = 10/41 (24%), Positives = 19/41 (46%) Frame = -2 Query: 248 IFGWRAVGERVCCIASDRTHGLNGICSTSNKQQHFICVRDF 126 + G VCC+ +++G N +C+ H + V D+ Sbjct: 152 VLGLGVFDRAVCCVGFSKSNGGNLLCAVDESNDHMLSVWDW 192
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = -1 Query: 411 GETKDGIYIPDT-EKLERLKVAEIKHSRLAMLAMLIFYFEA-GQGKTPL 271 GE+ D + + D + LKV EIK+ RLA +M F+ +A GK P+ Sbjct: 179 GESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPV 227
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = -1 Query: 372 KLERLKVAEIKHSRLAMLAMLIFYFE 295 K++ L+ EIK+ RLAMLA++ +F+ Sbjct: 214 KIKELRTKEIKNGRLAMLAVMGAWFQ 239
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = -1 Query: 372 KLERLKVAEIKHSRLAMLAMLIFYFE 295 K++ L+ EIK+ RLAMLA++ +F+ Sbjct: 214 KIKELRTKEIKNGRLAMLAVMGAWFQ 239
>RPA2_ASHGO (Q75DS1) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)| (RNA polymerase I subunit 2) Length = 1198 Score = 28.1 bits (61), Expect = 8.8 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = +3 Query: 54 ITWYIRWRKKEYLIPHSIYTRHLKEVTDTD 143 +T+ WRK EYL+P + + L + +D + Sbjct: 252 VTFRFSWRKNEYLVPVVLILKALTDASDRE 281
>HEMH_SYNPX (Q7U5G0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -1 Query: 351 AEIKHSRLAMLAMLIFYFEAGQGKTPLGALGL 256 +E+ + RLAML F E G PL ALGL Sbjct: 359 SEVWNGRLAMLGFSAFLLELISGHGPLHALGL 390 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,338,626 Number of Sequences: 219361 Number of extensions: 1181198 Number of successful extensions: 3792 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 3650 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3790 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
