>VPE_CITSI (P49043) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
          Length = 494

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVM 236
           DDWG LKS+VR FE  CG L+QYGMKHMRSLANICN G+ +E M
Sbjct: 426 DDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKM 469

>VPEB_ARATH (Q39044) Vacuolar processing enzyme, beta-isozyme precursor (EC|
           3.4.22.-) (Beta-VPE)
          Length = 486

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVMDK 230
           DDW  LKS+VR FEE CG LTQYGMKHMR+ AN+CN GV +E+M++
Sbjct: 416 DDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEE 461

>VPE_RICCO (P49042) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
          Length = 497

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 32/46 (69%), Positives = 36/46 (78%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVMDK 230
           DDWG LKS+VR FE  CG LTQYGMKHMR+ ANICNAGV    M++
Sbjct: 429 DDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEE 474

>VPE2_PHAVU (O24326) Vacuolar processing enzyme precursor (EC 3.4.22.-)|
           (Pv-VPE)
          Length = 493

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVMDK 230
           DDW  LKS+VR +E  CG LTQYGMKHMR+ ANICN+GV E  M+K
Sbjct: 425 DDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEK 470

>VPE_SOYBN (P49045) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
          Length = 495

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVMDK 230
           DDW  LKS+VR FE  CG LTQYGMKHMR+ ANICN+GV E  M++
Sbjct: 427 DDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEE 472

>VPEG_ARATH (Q39119) Vacuolar processing enzyme, gamma-isozyme precursor (EC|
           3.4.22.-) (Gamma-VPE)
          Length = 490

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVMDK 230
           DDW  LK+ VR FE  CG L+QYG+KHMRS ANICNAG++ E M++
Sbjct: 422 DDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEE 467

>VPE1_PHAVU (O24325) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
           (Legumain-like proteinase) (LLP)
          Length = 484

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVM 236
           DDW  LK++VR FE  CG L+QYGMKHMRS AN+CN G+++E M
Sbjct: 416 DDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQM 459

>VPEA_ARATH (P49047) Vacuolar processing enzyme, alpha-isozyme precursor (EC|
           3.4.22.-) (Alpha-VPE)
          Length = 478

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVMDK 230
           DDW  LKS+VR FE  CG L+QYG+KHMRS+AN+CNAG++   M++
Sbjct: 410 DDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEE 455

>LEGU_CANEN (P49046) Legumain precursor (EC 3.4.22.34) (Asparaginyl|
           endopeptidase)
          Length = 475

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVMDK 230
           DDW  LKS+VR FE  CG LTQYGMKHMR+  N+CN+GV +  M++
Sbjct: 407 DDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEE 452

>VPE_VICSA (P49044) Vacuolar processing enzyme precursor (EC 3.4.22.-) (VPE)|
           (Proteinase B)
          Length = 493

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVM 236
           D+W  LK++V+ FE  CG L+QYGMKHMRS ANICNAG+  E M
Sbjct: 425 DNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPM 468

>APOA1_RABIT (P09809) Apolipoprotein A-I precursor (Apo-AI) (ApoA-I)|
          Length = 266

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQYGMKHMRSLANICNAGVREEV 239
           D+W SL S V + +E+ GP+TQ    ++         G+REE+
Sbjct: 71  DNWDSLSSTVSKLQEQLGPVTQEFWDNLEKETE----GLREEM 109

>APOA1_CANFA (P02648) Apolipoprotein A-I precursor (Apo-AI) (ApoA-I)|
          Length = 266

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQ 302
           D+W SL S V +  E+ GP+TQ
Sbjct: 71  DNWDSLSSTVTKLREQIGPVTQ 92

>Y571_MYCPN (P75207) Hypothetical ABC transporter ATP-binding MG390 homolog|
           (D02_orf660)
          Length = 660

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +3

Query: 39  IAIKAYIYSNYILAGQHGLEYLQQSRPYISTTPY 140
           + IK   Y+N++L  +H L ++   +  I+ +PY
Sbjct: 623 LLIKPLTYNNFVLMVEHDLRFVNSEQDLINLSPY 656

>APOA1_RAT (P04639) Apolipoprotein A-I precursor (Apo-AI) (ApoA-I)|
          Length = 259

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQ 302
           D+W +L S V R +E+ GP+TQ
Sbjct: 71  DNWDTLGSTVGRLQEQLGPVTQ 92

>SGO1_MAIZE (Q4QSC8) Shugoshin-1 (ZmSGO1)|
          Length = 474

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -2

Query: 304 QYGM---KHMRSLANICNAGVREEVM 236
           QYG    KHM+SL N C+A V E +M
Sbjct: 255 QYGQTTGKHMKSLQNECSATVHEVIM 280

>ODPA_ZYMMO (O66112) Pyruvate dehydrogenase E1 component, alpha subunit (EC|
           1.2.4.1)
          Length = 354

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 343 VVRRFEERCGPLTQYGMKHMRSLANICNAGVREEVM 236
           ++RRFEERCG L   G+     +A  C+  + +E +
Sbjct: 48  MIRRFEERCGQLYGLGL-----IAGFCHLYIGQEAV 78

>ALG11_YARLI (Q6C9T3) Alpha-1,2-mannosyltransferase ALG11 (EC 2.4.1.-)|
           (Asparagine-linked glycosylation protein 11)
          Length = 635

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 50  SIYLQQLHTCWAAWTGVFTAITTVYIDHT--IFWMTDVTWIDH 172
           ++ +Q   + W AW G+ T +  V++D     F    V+W+ H
Sbjct: 233 TLMMQAAGSVWMAWHGISTLVPDVFVDTMGYPFAYPLVSWVTH 275

>BORL2_ARATH (Q9XI23) Boron transporter-like protein 2|
          Length = 683

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +2

Query: 5   AAPTMLELFSLYS---NKSIYLQQLHTCWAAWTGVFTAI 112
           A PT+L    LY+    +    +QL+  WAAW  V+TA+
Sbjct: 101 AEPTVLMYVYLYNFAIGRPELGKQLYLAWAAWVCVWTAL 139

>ACH92_ONCMY (Q68RJ7) Neuronal acetylcholine receptor protein, alpha-9-II|
           subunit precursor (Nicotinic acetylcholine receptor
           subunit alpha 9-II) (NACHR alpha 9-II)
          Length = 550

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 112 DCCKYSSPCCP 80
           DCCK + PCCP
Sbjct: 449 DCCKEAPPCCP 459

>APOA1_PAPHA (P68293) Apolipoprotein A-I precursor (Apo-AI) (ApoA-I)|
          Length = 267

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQ 302
           D+W S+ S V +  E+ GP+TQ
Sbjct: 72  DNWDSVTSTVSKLREQLGPVTQ 93

>APOA1_MACFA (P68292) Apolipoprotein A-I precursor (Apo-AI) (ApoA-I)|
          Length = 267

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 367 DDWGSLKSVVRRFEERCGPLTQ 302
           D+W S+ S V +  E+ GP+TQ
Sbjct: 72  DNWDSVTSTVSKLREQLGPVTQ 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,147,897
Number of Sequences: 219361
Number of extensions: 792646
Number of successful extensions: 2172
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2172
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)