ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476027.1| Oryza sativa (japonica cultivar-group), predic... 74 4e-10
2gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
3gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
4gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
6dbj|AK058553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
7emb|AJ131719.1|ZMA131719 Zea mays mRNA for legumain-like proteas... 58 2e-05
8gb|AY104034.1| Zea mays PCO131778 mRNA sequence 58 2e-05
9gb|AF082347.1|AF082347 Zea mays C13 endopeptidase NP1 precursor,... 58 2e-05
10emb|AJ007743.1|VSA007743 Vicia sativa mRNA for cysteine proteina... 54 3e-04
11emb|AJ251453.1|ZMA251453 Zea mays see2a gene for putative leguma... 50 0.005
12emb|AJ131718.1|ZMA131718 Zea mays mRNA for legumain-like proteas... 50 0.005
13ref|XM_467011.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.020
14ref|XM_467012.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.020
15gb|AY062178.1| Oryza sativa subsp. indica C13 cysteine proteinas... 48 0.020
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
17dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
18dbj|AK101360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
19dbj|AK070079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
20dbj|AB081465.1| Oryza sativa (japonica cultivar-group) gene for ... 48 0.020
21dbj|AB081464.1| Oryza sativa (japonica cultivar-group) mRNA for ... 48 0.020
22emb|Z99174.1|VNCYSTPRO Vicia narbonensis mRNA for cysteine prote... 48 0.020
23emb|AJ843978.1| Plantago major partial mRNA for endopeptidase 1 ... 46 0.079
24ref|NM_185324.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.31
25dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
27gb|AF260827.1|AF260827 Ipomoea batatas cysteine protease mRNA, c... 44 0.31
28dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
29emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.31
30gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.31
31emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F... 44 0.31
32emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.31
33ref|XM_728198.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 1.2
34dbj|AB224691.1| Aspergillus oryzae cDNA, contig sequence: AoEST1540 42 1.2
35dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 42 1.2
36emb|AJ251454.1|ZMA251454 Zea mays see2b gene for putative leguma... 42 1.2
37gb|AF082346.1|AF082346 Hordeum vulgare C13 endopeptidase NP1 pre... 42 1.2
38gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, comple... 40 4.9
39gb|AC186002.3| Pan troglodytes BAC clone CH251-86D23 from chromo... 40 4.9
40gb|AC124434.3| Mus musculus BAC clone RP24-250K22 from chromosom... 40 4.9
41emb|AL772307.15| Human DNA sequence from clone RP11-416B15 on ch... 40 4.9
42emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on ch... 40 4.9
43emb|AL772155.6| Human DNA sequence from clone RP11-149F8 on chro... 40 4.9
44emb|AL591438.6| Human DNA sequence from clone RP11-452D2 on chro... 40 4.9
45emb|AL591479.3| Human DNA sequence from clone RP11-154P18 on chr... 40 4.9
46emb|AL354718.10| Human DNA sequence from clone RP11-187C18 on ch... 40 4.9
47emb|AL023713.1|HS324L9 Human DNA sequence from clone RP3-324L9 o... 40 4.9
48gb|AC183610.3| Pan troglodytes BAC clone CH251-223D9 from chromo... 40 4.9
49emb|AL592220.6| Human DNA sequence from clone RP11-12P21 on chro... 40 4.9
50emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chr... 40 4.9
51dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
52emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chr... 40 4.9
53emb|AL162252.17| Human DNA sequence from clone RP11-55J24 on chr... 40 4.9 
>ref|XM_476027.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1425

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 250  ggacgccggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtca 309
            |||||||||||||||| |||||||| || || ||||||||||| |||||||||||   ||
Sbjct: 1360 ggacgccggcgttgcagatgttggcgaaggagcgcatgtgctttatcccgtactgtccca 1301

                                             
Query: 310  gcgggccgcaccgctcctcgaacctccgcacca 342
            |||  || ||| | ||||||||| |||||||||
Sbjct: 1300 gcgacccacactgatcctcgaacgtccgcacca 1268
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>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0030I14, complete sequence
          Length = 159035

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                        
Query: 250  ggacgccggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtca 309
            |||||||||||||||| |||||||| || || ||||||||||| |||||||||||   ||
Sbjct: 6913 ggacgccggcgttgcagatgttggcgaaggagcgcatgtgctttatcccgtactgtccca 6972

                                             
Query: 310  gcgggccgcaccgctcctcgaacctccgcacca 342
            |||  || ||| | ||||||||| |||||||||
Sbjct: 6973 gcgacccacactgatcctcgaacgtccgcacca 7005
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
              complete sequence
          Length = 142196

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                          
Query: 250    ggacgccggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtca 309
              |||||||||||||||| |||||||| || || ||||||||||| |||||||||||   ||
Sbjct: 137545 ggacgccggcgttgcagatgttggcgaaggagcgcatgtgctttatcccgtactgtccca 137604

                                               
Query: 310    gcgggccgcaccgctcctcgaacctccgcacca 342
              |||  || ||| | ||||||||| |||||||||
Sbjct: 137605 gcgacccacactgatcctcgaacgtccgcacca 137637
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>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03,
             complete sequence
          Length = 45160

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                         
Query: 250   ggacgccggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtca 309
             |||||||||||||||| |||||||| || || ||||||||||| |||||||||||   ||
Sbjct: 34377 ggacgccggcgttgcagatgttggcgaaggagcgcatgtgctttatcccgtactgtccca 34318

                                              
Query: 310   gcgggccgcaccgctcctcgaacctccgcacca 342
             |||  || ||| | ||||||||| |||||||||
Sbjct: 34317 gcgacccacactgatcctcgaacgtccgcacca 34285
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                            
Query: 250      ggacgccggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtca 309
                |||||||||||||||| |||||||| || || ||||||||||| |||||||||||   ||
Sbjct: 29358888 ggacgccggcgttgcagatgttggcgaaggagcgcatgtgctttatcccgtactgtccca 29358947

                                                 
Query: 310      gcgggccgcaccgctcctcgaacctccgcacca 342
                |||  || ||| | ||||||||| |||||||||
Sbjct: 29358948 gcgacccacactgatcctcgaacgtccgcacca 29358980
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>dbj|AK058553.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C11, full
            insert sequence
          Length = 1522

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 250  ggacgccggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtca 309
            |||||||||||||||| |||||||| || || ||||||||||| |||||||||||   ||
Sbjct: 1360 ggacgccggcgttgcagatgttggcgaaggagcgcatgtgctttatcccgtactgtccca 1301

                                             
Query: 310  gcgggccgcaccgctcctcgaacctccgcacca 342
            |||  || ||| | ||||||||| |||||||||
Sbjct: 1300 gcgacccacactgatcctcgaacgtccgcacca 1268
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>emb|AJ131719.1|ZMA131719 Zea mays mRNA for legumain-like protease (see2a)
          Length = 1864

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 258  gcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcg 306
            |||||||| ||||| || || |||||||||||||||||||| |||||||
Sbjct: 1390 gcgttgcagatgtttgcgaaggaccgcatgtgcttcatcccatactgcg 1342
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>gb|AY104034.1| Zea mays PCO131778 mRNA sequence
          Length = 1981

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 258  gcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcg 306
            |||||||| ||||| || || |||||||||||||||||||| |||||||
Sbjct: 1428 gcgttgcagatgtttgcgaaggaccgcatgtgcttcatcccatactgcg 1380
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>gb|AF082347.1|AF082347 Zea mays C13 endopeptidase NP1 precursor, mRNA, complete cds
          Length = 1919

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 258  gcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcg 306
            |||||||| ||||| || || |||||||||||||||||||| |||||||
Sbjct: 1425 gcgttgcagatgtttgcgaaggaccgcatgtgcttcatcccatactgcg 1377
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>emb|AJ007743.1|VSA007743 Vicia sativa mRNA for cysteine proteinase precursor
          Length = 1851

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcag 310
            ||||||||||||||| || | ||||||||| |||||||| ||||| |||||
Sbjct: 1427 gttgcaaatgttggcaaatgcccgcatgtgtttcatcccatactgagtcag 1377
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>emb|AJ251453.1|ZMA251453 Zea mays see2a gene for putative legumain, exons 1-9
          Length = 6914

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 258  gcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcg 306
            |||||||| ||||| || || || ||||||||||||||||| |||||||
Sbjct: 6772 gcgttgcacatgttcgcgaaggatcgcatgtgcttcatcccatactgcg 6724
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>emb|AJ131718.1|ZMA131718 Zea mays mRNA for legumain-like protease (see2a)
          Length = 1569

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 258  gcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcg 306
            |||||||| ||||| || || || ||||||||||||||||| |||||||
Sbjct: 1404 gcgttgcacatgttcgcgaaggatcgcatgtgcttcatcccatactgcg 1356
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>ref|XM_467011.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1889

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
            ||||||||| || || |||| || |||||||||||| |||||||| || ||||| |||||
Sbjct: 1600 gttgcaaatattagcaaacgccctcatgtgcttcataccgtactgagtgagcggtccgca 1541
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>ref|XM_467012.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1774

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
            ||||||||| || || |||| || |||||||||||| |||||||| || ||||| |||||
Sbjct: 1484 gttgcaaatattagcaaacgccctcatgtgcttcataccgtactgagtgagcggtccgca 1425
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>gb|AY062178.1| Oryza sativa subsp. indica C13 cysteine proteinase precursor (NP1)
            mRNA, complete cds
          Length = 1642

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
            ||||||||| || || |||| || |||||||||||| |||||||| || ||||| |||||
Sbjct: 1341 gttgcaaatattagcaaacgccctcatgtgcttcataccgtactgagtgagcggtccgca 1282
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                            
Query: 260      gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
                ||||||||| || || |||| || |||||||||||| |||||||| || ||||| |||||
Sbjct: 25909228 gttgcaaatattagcaaacgccctcatgtgcttcataccgtactgagtgagcggtccgca 25909287
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>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1282_H11
          Length = 143314

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                         
Query: 260   gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
             ||||||||| || || |||| || |||||||||||| |||||||| || ||||| |||||
Sbjct: 60569 gttgcaaatattagcaaacgccctcatgtgcttcataccgtactgagtgagcggtccgca 60628
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>dbj|AK101360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035H01, full
            insert sequence
          Length = 1888

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
            ||||||||| || || |||| || |||||||||||| |||||||| || ||||| |||||
Sbjct: 1599 gttgcaaatattagcaaacgccctcatgtgcttcataccgtactgagtgagcggtccgca 1540
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>dbj|AK070079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043E22, full
            insert sequence
          Length = 1774

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
            ||||||||| || || |||| || |||||||||||| |||||||| || ||||| |||||
Sbjct: 1484 gttgcaaatattagcaaacgccctcatgtgcttcataccgtactgagtgagcggtccgca 1425
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>dbj|AB081465.1| Oryza sativa (japonica cultivar-group) gene for asparaginyl
            endopeptidase REP-2, complete cds
          Length = 4532

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
            ||||||||| || || |||| || |||||||||||| |||||||| || ||||| |||||
Sbjct: 4276 gttgcaaatattagcaaacgccctcatgtgcttcataccgtactgagtgagcggtccgca 4217
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>dbj|AB081464.1| Oryza sativa (japonica cultivar-group) mRNA for asparaginyl
            endopeptidase REP-2, complete cds
          Length = 1682

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
            ||||||||| || || |||| || |||||||||||| |||||||| || ||||| |||||
Sbjct: 1389 gttgcaaatattagcaaacgccctcatgtgcttcataccgtactgagtgagcggtccgca 1330
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>emb|Z99174.1|VNCYSTPRO Vicia narbonensis mRNA for cysteine proteinase precursor
          Length = 1840

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggccgca 319
            |||||||||||| || || | ||||||||| |||||||| ||||| ||||| | ||||||
Sbjct: 1400 gttgcaaatgttcgcaaatgcccgcatgtgtttcatcccatactgggtcagtgagccgca 1341
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>emb|AJ843978.1| Plantago major partial mRNA for endopeptidase 1 (enp1 gene)
          Length = 783

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 282 cgcatgtgcttcatcccgtactg 304
           |||||||||||||||||||||||
Sbjct: 375 cgcatgtgcttcatcccgtactg 353
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>ref|NM_185324.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1359

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                        
Query: 256  cggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggc 315
            |||||||||| |||||||| || |  ||  ||||||||||||| ||||||  ||||||||
Sbjct: 1288 cggcgttgcacatgttggcgaaggcgcgtgtgtgcttcatcccatactgccccagcgggc 1229

                                                  
Query: 316  cgcaccgctcctcgaacctccgcaccacagacttgagg 353
            | ||  |  |||||||| | |||||||  |||||||||
Sbjct: 1228 cacagtgagcctcgaacgtgcgcaccatggacttgagg 1191
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 53      atatatttacagcaattacatacttg 78
               ||||||||||||||| ||||||||||
Sbjct: 5585379 atatatttacagcaagtacatacttg 5585354
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                          
Query: 256    cggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggc 315
              |||||||||| |||||||| || |  ||  ||||||||||||| ||||||  ||||||||
Sbjct: 360511 cggcgttgcacatgttggcgaaggcgcgtgtgtgcttcatcccatactgccccagcgggc 360452

                                                    
Query: 316    cgcaccgctcctcgaacctccgcaccacagacttgagg 353
              | ||  |  |||||||| | |||||||  |||||||||
Sbjct: 360451 cacagtgagcctcgaacgtgcgcaccatggacttgagg 360414



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 242      ctcctcccggacgccggcgttgca 265
                ||||||||||||||||||| ||||
Sbjct: 19314609 ctcctcccggacgccggcgatgca 19314586
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>gb|AF260827.1|AF260827 Ipomoea batatas cysteine protease mRNA, complete cds
          Length = 1572

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 255  ccggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactg 304
            ||||| ||||| |||||||| |  || |||||||| ||||||||||||||
Sbjct: 1412 ccggcattgcagatgttggcaatggagcgcatgtgtttcatcccgtactg 1363
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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                         
Query: 256   cggcgttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactgcgtcagcgggc 315
             |||||||||| |||||||| || |  ||  ||||||||||||| ||||||  ||||||||
Sbjct: 70464 cggcgttgcacatgttggcgaaggcgcgtgtgtgcttcatcccatactgccccagcgggc 70405

                                                   
Query: 316   cgcaccgctcctcgaacctccgcaccacagacttgagg 353
             | ||  |  |||||||| | |||||||  |||||||||
Sbjct: 70404 cacagtgagcctcgaacgtgcgcaccatggacttgagg 70367
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>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 117585

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 53    atatatttacagcaattacatacttg 78
             ||||||||||||||| ||||||||||
Sbjct: 12756 atatatttacagcaagtacatacttg 12781
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 53      atatatttacagcaattacatacttg 78
               ||||||||||||||| ||||||||||
Sbjct: 5585368 atatatttacagcaagtacatacttg 5585343
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>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar
              Nipponbare of ssp. japonica of Oryza sativa (rice),
              complete sequence
          Length = 160556

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 53     atatatttacagcaattacatacttg 78
              ||||||||||||||| ||||||||||
Sbjct: 138184 atatatttacagcaagtacatacttg 138159
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>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 53    atatatttacagcaattacatacttg 78
             ||||||||||||||| ||||||||||
Sbjct: 67506 atatatttacagcaagtacatacttg 67531
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>ref|XM_728198.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000510.00.0)
           partial mRNA
          Length = 465

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 41  agcaataaaagcatatattta 61
           |||||||||||||||||||||
Sbjct: 196 agcaataaaagcatatattta 176
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>dbj|AB224691.1| Aspergillus oryzae cDNA, contig sequence: AoEST1540
          Length = 939

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 183 cagatgatcaaggatgaaggactag 207
           |||||||||||||||||||| ||||
Sbjct: 598 cagatgatcaaggatgaagggctag 622
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 183     cagatgatcaaggatgaaggactag 207
               |||||||||||||||||||| ||||
Sbjct: 1942582 cagatgatcaaggatgaagggctag 1942558
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>emb|AJ251454.1|ZMA251454 Zea mays see2b gene for putative legumain, exons 1-9
          Length = 8994

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 258  gcgttgcaaatgttggctaacgaccgcatgtgcttcatccc 298
            |||||||| ||||| |  || ||||||||||||||||||||
Sbjct: 5356 gcgttgcagatgtttgggaaggaccgcatgtgcttcatccc 5316
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>gb|AF082346.1|AF082346 Hordeum vulgare C13 endopeptidase NP1 precursor, mRNA, partial cds
          Length = 1485

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 260  gttgcaaatgttggctaacgaccgcatgtgcttcatcccgtactg 304
            |||||| ||||| || |||| || |||||||||||| ||||||||
Sbjct: 1135 gttgcagatgtttgcgaacgccctcatgtgcttcatgccgtactg 1091
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>gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, complete sequence
          Length = 184603

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 38     tatagcaataaaagcatatattta 61
              ||||||| ||||||||||||||||
Sbjct: 118768 tatagcattaaaagcatatattta 118745
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>gb|AC186002.3| Pan troglodytes BAC clone CH251-86D23 from chromosome 9, complete
              sequence
          Length = 162651

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     aataaaagcatatatttaca 63
              ||||||||||||||||||||
Sbjct: 103535 aataaaagcatatatttaca 103554
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>gb|AC124434.3| Mus musculus BAC clone RP24-250K22 from chromosome 8, complete sequence
          Length = 167741

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 38    tatagcaataaaagcatatattta 61
             ||||||| ||||||||||||||||
Sbjct: 46248 tatagcattaaaagcatatattta 46225
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>emb|AL772307.15| Human DNA sequence from clone RP11-416B15 on chromosome 9 Contains a
              pseudogene similar to part of ribosomal protein L7a (RPL7A)
              and a CpG island, complete sequence
          Length = 161380

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     aataaaagcatatatttaca 63
              ||||||||||||||||||||
Sbjct: 120272 aataaaagcatatatttaca 120253
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>emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on chromosome 9 Contains
             three novel pseudogenes, a pseudogene similar to part of
             meprin A, alpha (PABA peptide hydrolase) (MEP1A), a
             pseudogene similar to part of G protein-coupled receptor
             116 (GPR116), two novel genes, the 5' end of a novel gene
             similar to ankyrin repeat domain 20A (ANKRD20A) and three
             CpG islands, complete sequence
          Length = 165886

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aataaaagcatatatttaca 63
             ||||||||||||||||||||
Sbjct: 16474 aataaaagcatatatttaca 16455
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>emb|AL772155.6| Human DNA sequence from clone RP11-149F8 on chromosome 9 Contains a
             novel gene, two novel pseudogenes, a  pseudogene similar
             to part of myosin V family protein, a tumor suppressor
             deleted in oral cancer-related 1 (DOC-1R) pseudogene, a
             pseudogene similar to part of prostaglandin E receptor 4
             (subtype EP4) (PTGER4) and a CpG island, complete sequence
          Length = 163569

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aataaaagcatatatttaca 63
             ||||||||||||||||||||
Sbjct: 93812 aataaaagcatatatttaca 93831
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>emb|AL591438.6| Human DNA sequence from clone RP11-452D2 on chromosome 9 Contains a
             pseudogene similar to part of ribosomal protein L7a
             (RPL7A), a novel pseudogene and a CpG island, complete
             sequence
          Length = 176097

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aataaaagcatatatttaca 63
             ||||||||||||||||||||
Sbjct: 35387 aataaaagcatatatttaca 35406
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>emb|AL591479.3| Human DNA sequence from clone RP11-154P18 on chromosome 9 Contains two
             novel pseudogene, a CDRT15 protein pseudogene, a
             pseudogene similar to part of meprin A, alpha (PABA
             peptide hydrolase) (MEP1A) and two CpG islands, complete
             sequence
          Length = 178933

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aataaaagcatatatttaca 63
             ||||||||||||||||||||
Sbjct: 69045 aataaaagcatatatttaca 69026
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>emb|AL354718.10| Human DNA sequence from clone RP11-187C18 on chromosome 9 Contains a
              pseudogene similar to part of ribosomal protein L7a
              (RPL7A), three novel genes, three novel pseudogene and two
              CpG islands, complete sequence
          Length = 175271

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     aataaaagcatatatttaca 63
              ||||||||||||||||||||
Sbjct: 103241 aataaaagcatatatttaca 103222
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>emb|AL023713.1|HS324L9 Human DNA sequence from clone RP3-324L9 on chromosome 6p22.3-23,
             complete sequence
          Length = 73427

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ttttctttatatagcaataa 48
             ||||||||||||||||||||
Sbjct: 54236 ttttctttatatagcaataa 54217
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>gb|AC183610.3| Pan troglodytes BAC clone CH251-223D9 from chromosome 9, complete
              sequence
          Length = 159456

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     aataaaagcatatatttaca 63
              ||||||||||||||||||||
Sbjct: 116210 aataaaagcatatatttaca 116229
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>emb|AL592220.6| Human DNA sequence from clone RP11-12P21 on chromosome 9 Contains a
             tumor suppressor deleted in oral cancer-related 1 (DOC-1R)
             pseudogene, a novel pseudogene and a CpG island, complete
             sequence
          Length = 163556

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aataaaagcatatatttaca 63
             ||||||||||||||||||||
Sbjct: 93827 aataaaagcatatatttaca 93846
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>emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chromosome 21, complete
             sequence
          Length = 278310

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aataaaagcatatatttaca 63
             ||||||||||||||||||||
Sbjct: 78818 aataaaagcatatatttaca 78799
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>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0438E12
          Length = 146851

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 242   ctcctcccggacgccggcgttgca 265
             ||||||||||||||||||| ||||
Sbjct: 19382 ctcctcccggacgccggcgatgca 19359
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>emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chromosome 22, complete
             sequence
          Length = 219376

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aataaaagcatatatttaca 63
             ||||||||||||||||||||
Sbjct: 22354 aataaaagcatatatttaca 22335
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>emb|AL162252.17| Human DNA sequence from clone RP11-55J24 on chromosome 9, complete
             sequence
          Length = 176845

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aataaaagcatatatttaca 63
             ||||||||||||||||||||
Sbjct: 68781 aataaaagcatatatttaca 68762


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,257,379
Number of Sequences: 3902068
Number of extensions: 3257379
Number of successful extensions: 64575
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 64386
Number of HSP's gapped (non-prelim): 193
length of query: 368
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 346
effective length of database: 17,147,199,772
effective search space: 5932931121112
effective search space used: 5932931121112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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