Clone Information

BLAST Search Result

Clone Name	rbart40d11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	C1TC_SPOFR (Q27772) C-1-tetrahydrofolate synthase, cytoplasmic (...	134	1e-31
2	C1TC_DROME (O96553) C-1-tetrahydrofolate synthase, cytoplasmic (...	134	1e-31
3	C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial...	122	7e-28
4	C1TC_MOUSE (Q922D8) C-1-tetrahydrofolate synthase, cytoplasmic (...	120	3e-27
5	C1TC_RAT (P27653) C-1-tetrahydrofolate synthase, cytoplasmic (C1...	118	8e-27
6	C1TC_HUMAN (P11586) C-1-tetrahydrofolate synthase, cytoplasmic (...	114	2e-25
7	C1TC_YEAST (P07245) C-1-tetrahydrofolate synthase, cytoplasmic (...	113	3e-25
8	MTDC_DROME (Q04448) Bifunctional methylenetetrahydrofolate dehyd...	111	1e-24
9	MTDC_MOUSE (P18155) Bifunctional methylenetetrahydrofolate dehyd...	108	1e-23
10	MTDC_CHICK (Q5ZKA5) Bifunctional methylenetetrahydrofolate dehyd...	107	2e-23
11	MTDC_HUMAN (P13995) Bifunctional methylenetetrahydrofolate dehyd...	105	5e-23
12	FOLD_HAEIN (P44313) FolD bifunctional protein [Includes: Methyle...	105	7e-23
13	FOLD_BUCBP (Q89A92) FolD bifunctional protein [Includes: Methyle...	96	7e-20
14	FOLD_BUCAP (Q8K979) FolD bifunctional protein [Includes: Methyle...	94	2e-19
15	FOLD_BACSU (P54382) FolD bifunctional protein [Includes: Methyle...	94	2e-19
16	FOLD_BUCAI (P57557) FolD bifunctional protein [Includes: Methyle...	94	3e-19
17	FOLD_RICCN (Q92HY4) FolD bifunctional protein [Includes: Methyle...	93	3e-19
18	FOLD_ECOLI (P24186) FolD bifunctional protein [Includes: Methyle...	93	5e-19
19	FOLD_CHLPN (Q9Z8K3) FolD bifunctional protein [Includes: Methyle...	92	6e-19
20	FOLD_STRTR (P96050) FolD bifunctional protein [Includes: Methyle...	92	1e-18
21	FOLD_RICPR (Q9ZD32) FolD bifunctional protein [Includes: Methyle...	91	1e-18
22	FOLD_PHOPO (P51696) FolD bifunctional protein (PPDC) [Includes: ...	89	7e-18
23	FOLD_HELPJ (Q9ZLQ4) FolD bifunctional protein [Includes: Methyle...	89	9e-18
24	FOLD_SALTY (P58688) FolD bifunctional protein [Includes: Methyle...	88	1e-17
25	FOLD_SALTI (Q60006) FolD bifunctional protein [Includes: Methyle...	88	1e-17
26	FOLD_HELPY (P56467) FolD bifunctional protein [Includes: Methyle...	87	2e-17
27	FOLD_CHLMU (Q9PKW1) FolD bifunctional protein [Includes: Methyle...	86	4e-17
28	FOLD_CHLTR (O84081) FolD bifunctional protein [Includes: Methyle...	84	2e-16
29	FOLD_THEAC (Q05213) Probable folD bifunctional protein [Includes...	77	3e-14
30	FOLD_MYCPN (P75096) FolD bifunctional protein [Includes: Methyle...	60	3e-09
31	FOLD_MYCGE (P47259) FolD bifunctional protein [Includes: Methyle...	52	7e-07
32	OCD2_RHIME (P58339) Ornithine cyclodeaminase 2 (EC 4.3.1.12) (OC...	35	0.11
33	IKBE_HUMAN (O00221) NF-kappa-B inhibitor epsilon (NF-kappa-BIE) ...	34	0.25
34	AKAP8_HUMAN (O43823) A-kinase anchor protein 8 (A-kinase anchor ...	33	0.56
35	RL2_BORBU (P94270) 50S ribosomal protein L2	33	0.56
36	AKAP8_MOUSE (Q9DBR0) A-kinase anchor protein 8 (A-kinase anchor ...	32	0.73
37	GP111_HUMAN (Q8IZF7) Probable G-protein coupled receptor 111 (G-...	32	0.73
38	V_NDVU2 (Q06428) Nonstructural protein V	32	1.2
39	CD97_MOUSE (Q9Z0M6) CD97 antigen precursor	31	1.6
40	LRP2_HUMAN (P98164) Low-density lipoprotein receptor-related pro...	31	2.1
41	B3GA2_CANFA (Q5CAZ6) Galactosylgalactosylxylosylprotein 3-beta-g...	31	2.1
42	PRRT1_MOUSE (O35449) Proline-rich transmembrane protein 1	31	2.1
43	SECD_MYCLE (P38387) Protein-export membrane protein secD	30	2.8
44	MATR3_MOUSE (Q8K310) Matrin-3	30	2.8
45	MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-...	30	2.8
46	DCUD_ECOLI (P45428) Putative cryptic C4-dicarboxylate transporte...	30	2.8
47	AKAP8_RAT (Q63014) A-kinase anchor protein 8 (A-kinase anchor pr...	30	3.6
48	DISJ_BOTJA (P30431) Venom metalloproteinase jararhagin precursor...	30	4.7
49	ZN307_HUMAN (Q969J2) Zinc finger protein 307 (P373c6.1)	30	4.7
50	PRRT1_HUMAN (Q99946) Proline-rich transmembrane protein 1	30	4.7
51	SAM68_RAT (Q91V33) KH domain-containing, RNA-binding, signal tra...	30	4.7
52	MURE_BRUSU (Q8FZP0) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-...	29	6.2
53	SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich...	29	6.2
54	CD97_HUMAN (P48960) CD97 antigen precursor (Leukocyte antigen CD97)	29	6.2
55	PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing famil...	29	6.2
56	MATR3_RAT (P43244) Matrin-3 (Nuclear scaffold protein P130/MAT3)	29	6.2
57	EMR2_HUMAN (Q9UHX3) EGF-like module-containing mucin-like hormon...	29	6.2
58	AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor ...	29	8.1
59	KRAF1_CAEEL (Q07292) Raf homolog serine/threonine-protein kinase...	29	8.1
60	SYN3_HUMAN (O14994) Synapsin-3 (Synapsin III)	29	8.1

>C1TC_SPOFR (Q27772) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF|
           synthase) [Includes: Methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
           synthetase (EC 6.3.4.3)]
          Length = 933

 Score =  134 bits (338), Expect = 1e-31
 Identities = 64/104 (61%), Positives = 79/104 (75%)
 Frame = -3

Query: 489 ATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKSG 310
           ATV++ HS+T N   I   ADI++ A G+  M++G WIKPGA VID G N I DPT+KSG
Sbjct: 188 ATVTVCHSKTKNLSEITKTADILVVAIGRGEMVRGSWIKPGAVVIDCGINPISDPTKKSG 247

Query: 309 YRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
            RLVGDV + EA +VA H+TPVPGGVGPMTVAML++NTV  A+R
Sbjct: 248 QRLVGDVAYEEAVQVASHVTPVPGGVGPMTVAMLMRNTVQAARR 291

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>C1TC_DROME (O96553) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF|
           synthase) [Includes: Methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
           synthetase (EC 6.3.4.3)]
          Length = 968

 Score =  134 bits (338), Expect = 1e-31
 Identities = 67/106 (63%), Positives = 80/106 (75%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A+ATV++ HS+T N E I   ADI++   G A M+KG WIKPGA VID G N   D ++ 
Sbjct: 221 ANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKPDASKA 280

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
           SG +LVGDVD+AEA +VAGHLTPVPGGVGPMTVAML+KNTV  A R
Sbjct: 281 SGSKLVGDVDYAEALQVAGHLTPVPGGVGPMTVAMLMKNTVRSAAR 326

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>C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial precursor|
           (C1-THF synthase) [Includes: Methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
           synthetase (EC 6.3.
          Length = 975

 Score =  122 bits (305), Expect = 7e-28
 Identities = 61/109 (55%), Positives = 76/109 (69%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A+ATV++ HS T N   +V QADIVIAA G    +K DWIK GA VIDVG N + D ++K
Sbjct: 217 ANATVTVCHSHTRNIAEVVSQADIVIAACGIPQYVKSDWIKEGAVVIDVGINYVPDISKK 276

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQRGIV 169
           SG +LVGDVDF    +   ++TPVPGGVGPMTVAML+ N +  A+R  V
Sbjct: 277 SGQKLVGDVDFDSVKEKTSYITPVPGGVGPMTVAMLVSNVLLAAKRQFV 325

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>C1TC_MOUSE (Q922D8) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF|
           synthase) [Includes: Methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
           synthetase (EC 6.3.4.3)]
          Length = 934

 Score =  120 bits (300), Expect = 3e-27
 Identities = 57/105 (54%), Positives = 78/105 (74%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKS 313
           +ATV+  HS+T N +  V + DI++ A GQ  M+KG+WIKPGA VID G N + D T+ +
Sbjct: 188 NATVTTCHSKTANLDKEVNKGDILVVATGQPEMVKGEWIKPGAVVIDCGINYVPDDTKPN 247

Query: 312 GYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
           G ++VGDV + EA + A  +TPVPGGVGPMTVAML+++TV+ AQR
Sbjct: 248 GRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAQR 292

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>C1TC_RAT (P27653) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF|
           synthase) [Includes: Methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
           synthetase (EC 6.3.4.3)]
          Length = 934

 Score =  118 bits (296), Expect = 8e-27
 Identities = 56/105 (53%), Positives = 78/105 (74%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKS 313
           +ATV+  HS+T + +  V + DI++ A GQ  M+KG+WIKPGA VID G N + D T+ +
Sbjct: 188 NATVTTCHSKTADLDKEVNKGDILVVATGQPEMVKGEWIKPGAVVIDCGINYVPDDTKPN 247

Query: 312 GYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
           G ++VGDV + EA + A  +TPVPGGVGPMTVAML+++TV+ AQR
Sbjct: 248 GRKVVGDVAYDEAKEKASFITPVPGGVGPMTVAMLMQSTVESAQR 292

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>C1TC_HUMAN (P11586) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF|
           synthase) [Includes: Methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
           synthetase (EC 6.3.4.3)]
          Length = 934

 Score =  114 bits (284), Expect = 2e-25
 Identities = 54/105 (51%), Positives = 77/105 (73%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKS 313
           +ATV+  HS+T + +  V + DI++ A GQ  M+KG+WIKPGA VID G N + D  + +
Sbjct: 188 NATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVPDDKKPN 247

Query: 312 GYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
           G ++VGDV + EA + A  +TPVPGGVGPMTVAML+++TV+ A+R
Sbjct: 248 GRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKR 292

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>C1TC_YEAST (P07245) C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF|
           synthase) [Includes: Methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
           synthetase (EC 6.3.4.3)]
          Length = 946

 Score =  113 bits (282), Expect = 3e-25
 Identities = 57/113 (50%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPG--------AAVIDVGTNS 337
           ++TV+I HS+T +  + +  ADIV+ A GQ   +KG+W KP           VIDVGTN 
Sbjct: 186 NSTVTITHSKTRDIASYLHDADIVVVAIGQPEFVKGEWFKPRDGTSSDKKTVVIDVGTNY 245

Query: 336 IDDPTRKSGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
           + DP++KSG++ VGDV+F EA K    +TPVPGGVGPMTVAML++NT+  A+R
Sbjct: 246 VADPSKKSGFKCVGDVEFNEAIKYVHLITPVPGGVGPMTVAMLMQNTLIAAKR 298

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>MTDC_DROME (Q04448) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           (DNMDMC) [Includes: NAD-dependent
           methylenetetrahydrofolate dehydrogenase (EC 1.5.1.15);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)
          Length = 309

 Score =  111 bits (277), Expect = 1e-24
 Identities = 59/107 (55%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETI--VCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTR 319
           DATV+I H  TP  E      QADI++ A G+  +I  D +KPGA VIDVG N I D + 
Sbjct: 196 DATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKDEST 255

Query: 318 KSGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
              ++LVGDVDF E  +VAGH+TPVPGGVGPMTVAML+ NT+  A++
Sbjct: 256 GQ-FKLVGDVDFEEVRQVAGHITPVPGGVGPMTVAMLMHNTLKAARK 301

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>MTDC_MOUSE (P18155) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           [Includes: NAD-dependent methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9)]
          Length = 350

 Score =  108 bits (269), Expect = 1e-23
 Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPE----TIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDP 325
           DATV+I H  TP  +    TI+  ADIVI+AAG   +I  D IK GAAVIDVG N + DP
Sbjct: 225 DATVTISHRYTPKEQLKKHTIL--ADIVISAAGIPNLITADMIKEGAAVIDVGINRVQDP 282

Query: 324 TRKSGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
                 +LVGDVDF    K AG++TPVPGGVGPMTVAML+KNT+  A++
Sbjct: 283 VTAKP-KLVGDVDFEGVKKKAGYITPVPGGVGPMTVAMLMKNTIIAAKK 330

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>MTDC_CHICK (Q5ZKA5) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           [Includes: NAD-dependent methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9)]
          Length = 337

 Score =  107 bits (267), Expect = 2e-23
 Identities = 62/108 (57%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETI--VCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDP-T 322
           DATV+I H  TP  +      +ADIV+AAAG   +I  D IK GAAVIDVG   + DP T
Sbjct: 220 DATVTISHRYTPKEQLKQHTIRADIVVAAAGIPNLITADMIKEGAAVIDVGITRVQDPIT 279

Query: 321 RKSGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
            KS  RLVGDVDF    K A ++TPVPGGVGPMTVAML+KNT+  A++
Sbjct: 280 AKS--RLVGDVDFEGVKKKASYITPVPGGVGPMTVAMLMKNTIIAAKK 325

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>MTDC_HUMAN (P13995) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           [Includes: NAD-dependent methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9)]
          Length = 344

 Score =  105 bits (263), Expect = 5e-23
 Identities = 61/109 (55%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPE----TIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDP 325
           DATV+I H  TP  +    TI+  ADIVI+AAG   +I  D IK GAAVIDVG N + DP
Sbjct: 219 DATVTISHRYTPKEQLKKHTIL--ADIVISAAGIPNLITADMIKEGAAVIDVGINRVHDP 276

Query: 324 TRKSGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
                 +LVGDVDF    + AG++TPVPGGVGPMTVAML+KNT+  A++
Sbjct: 277 VTAKP-KLVGDVDFEGVRQKAGYITPVPGGVGPMTVAMLMKNTIIAAKK 324

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>FOLD_HAEIN (P44313) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 281

 Score =  105 bits (262), Expect = 7e-23
 Identities = 54/101 (53%), Positives = 70/101 (69%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A ATV++ H  T N E  V QADI++ A G+  +I GDWIK  A VIDVG N +D     
Sbjct: 181 AGATVTVTHRFTKNLENHVRQADILVVAVGKPNLISGDWIKESAVVIDVGINRVDG---- 236

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTV 193
              +LVGDV+F +A++ A ++TPVPGGVGPMTVAML+ NT+
Sbjct: 237 ---KLVGDVEFDKAAEKAAYITPVPGGVGPMTVAMLMSNTL 274

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>FOLD_BUCBP (Q89A92) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 287

 Score = 95.5 bits (236), Expect = 7e-20
 Identities = 52/101 (51%), Positives = 65/101 (64%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A  T +I H  T N +  V QAD+++ A G A  +KG WIK GA VIDVG N +     K
Sbjct: 182 AGCTTTITHRFTKNLKHYVKQADLIVIAIGHAHFLKGTWIKKGAIVIDVGINRL-----K 236

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTV 193
           +G  +VGDVDF  A K + ++TPVPGGVGPMTV  LL NT+
Sbjct: 237 NG-EIVGDVDFKTAYKKSSYITPVPGGVGPMTVITLLNNTL 276

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>FOLD_BUCAP (Q8K979) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 285

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 47/106 (44%), Positives = 66/106 (62%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A  T ++ H  T N    +  AD+++ A G+   + GDWIK GA VIDVG N + D +  
Sbjct: 182 AGCTTTVTHRFTKNLRHHIKNADLLVVAIGKPNFLHGDWIKEGAIVIDVGINKLKDGS-- 239

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
               +VGDVDF  AS  A ++TPVPGGVGP+TV  LL+NT++  ++
Sbjct: 240 ----IVGDVDFKSASLKAAYITPVPGGVGPITVITLLENTLEACEK 281

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>FOLD_BACSU (P54382) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 283

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 51/105 (48%), Positives = 66/105 (62%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKS 313
           +ATV+  HSRT N      +ADI++ A G+A  I  D IK GA VIDVG N +++     
Sbjct: 182 NATVTYCHSRTENITEHTKKADILVVAVGRANFISADQIKEGAVVIDVGVNRLENG---- 237

Query: 312 GYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQR 178
             +L GDV+F  A + A  +TPVPGGVGPMT+ ML  NTV  A+R
Sbjct: 238 --KLCGDVEFEGAKEKASFITPVPGGVGPMTITMLAHNTVKSAKR 280

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>FOLD_BUCAI (P57557) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 285

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 50/105 (47%), Positives = 69/105 (65%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A  T ++ H  T N +  V  AD++I A G+A  +KG WIK G+ VIDVG N +     K
Sbjct: 182 AGCTTTVTHRFTKNLKDHVQNADLLIVAVGKANFLKGSWIKTGSIVIDVGINRL-----K 236

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQ 181
           +G ++VGDV+F  A   A ++TPVPGGVGPMTVA LL+NT++  +
Sbjct: 237 NG-KVVGDVEFKTAYLRASYITPVPGGVGPMTVATLLQNTLEACE 280

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>FOLD_RICCN (Q92HY4) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 288

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 46/102 (45%), Positives = 65/102 (63%)
 Frame = -3

Query: 498 KADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTR 319
           K + +V+I HS+T N  +I  +ADIV+AA G  + +  ++  P + VIDVG N I     
Sbjct: 181 KENCSVTICHSKTHNLRSITSKADIVVAAIGSPLKLTAEYFNPKSIVIDVGINRI----- 235

Query: 318 KSGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTV 193
            S  +++GDVDF        ++TPVPGG+GPMT+A LLKNTV
Sbjct: 236 -SSNKIIGDVDFENVQSKVQYITPVPGGIGPMTIAFLLKNTV 276

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>FOLD_ECOLI (P24186) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 287

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 49/101 (48%), Positives = 66/101 (65%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A  T ++ H  T N    V  AD++I A G+   I GDWIK GA VIDVG N +++    
Sbjct: 181 AGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENG--- 237

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTV 193
              ++VGDV F +A+K A ++TPVPGGVGPMTVA L++NT+
Sbjct: 238 ---KVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL 275

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>FOLD_CHLPN (Q9Z8K3) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 286

 Score = 92.4 bits (228), Expect = 6e-19
 Identities = 47/101 (46%), Positives = 64/101 (63%)
 Frame = -3

Query: 498 KADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTR 319
           + + TV+++HS++ N   I+  ADI+IAA G  + IK   + P A ++DVGT  +     
Sbjct: 179 QTNCTVTVLHSQSENLPEILKTADIIIAALGAPLFIKETMVAPHAVIVDVGTTRVPADNA 238

Query: 318 KSGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNT 196
           K GY L+GDVDF         +TPVPGGVGPMTVAML+ NT
Sbjct: 239 K-GYTLLGDVDFNNVVTKCAAITPVPGGVGPMTVAMLMSNT 278

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>FOLD_STRTR (P96050) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 284

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 46/107 (42%), Positives = 67/107 (62%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKS 313
           +ATV++ HSRTP+   +  +AD++I A G+A  +  +++K GA VIDVG N      R  
Sbjct: 182 NATVTLTHSRTPHLAKVCNKADVLIVAIGRAKFVTEEFVKEGAVVIDVGIN------RDE 235

Query: 312 GYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQRGI 172
             +L GDVDF +  +    +TPVPGGVGPMT+ ML++ T   A R +
Sbjct: 236 EGKLCGDVDFDQVKEKVSMITPVPGGVGPMTITMLMEQTYQAALRSL 282

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>FOLD_RICPR (Q9ZD32) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 286

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 47/109 (43%), Positives = 65/109 (59%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKS 313
           + +V+I HS+T N  +I  +ADIV+ A G  + +  ++  P A VIDVG N I      S
Sbjct: 184 NCSVTICHSKTCNLSSITSKADIVVVAIGSPLKLTAEYFNPEAIVIDVGINRI------S 237

Query: 312 GYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQRGIVL 166
             ++ GDVDF        ++TPVPGG+GPMT+A LLKNTV   +  I L
Sbjct: 238 HNKIAGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVKAFKNAIAL 286

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>FOLD_PHOPO (P51696) FolD bifunctional protein (PPDC) [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 285

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 48/101 (47%), Positives = 65/101 (64%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A AT +  H  T + E  + QADI++ A G+   I G WIK GA VIDVG N +++    
Sbjct: 182 AGATTTTCHRFTQDLEGHIRQADILVVAVGKPNFIPGGWIKEGATVIDVGINRLENG--- 238

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTV 193
              +L GDV+F  A + A ++TPVPGGVGPMTVA L++NT+
Sbjct: 239 ---KLCGDVEFDVACQRAKYITPVPGGVGPMTVASLIENTL 276

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>FOLD_HELPJ (Q9ZLQ4) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 290

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 46/101 (45%), Positives = 62/101 (61%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A A+VS+ H  T +       ADIV    G+  +IK   +K GA V+D+G N ++D    
Sbjct: 185 AGASVSVCHILTKDISFYTKNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHLNDG--- 241

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTV 193
              R+VGDVDF  A K+AG +TPVP GVGPMT+  LL+NT+
Sbjct: 242 ---RIVGDVDFINAQKIAGFITPVPKGVGPMTIVSLLENTL 279

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>FOLD_SALTY (P58688) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 287

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 47/101 (46%), Positives = 65/101 (64%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A  T ++ H  T +    V  AD++I A G+   I G+WIK GA VIDVG N +++    
Sbjct: 181 AGCTTTVTHRFTKDLRHHVEHADLLIVAVGKPGFIPGEWIKEGAIVIDVGINRLENG--- 237

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTV 193
              ++VGDV F EA+  A ++TPVPGGVGPMTVA L++NT+
Sbjct: 238 ---KVVGDVVFDEAAARASYITPVPGGVGPMTVATLIENTL 275

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>FOLD_SALTI (Q60006) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 287

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 47/101 (46%), Positives = 65/101 (64%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A  T ++ H  T +    V  AD++I A G+   I G+WIK GA VIDVG N +++    
Sbjct: 181 AGCTTTVTHRFTKDLRHHVEHADLLIVAVGKPGFIPGEWIKEGAIVIDVGINRLENG--- 237

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTV 193
              ++VGDV F EA+  A ++TPVPGGVGPMTVA L++NT+
Sbjct: 238 ---KVVGDVVFDEAAARASYITPVPGGVGPMTVATLIENTL 275

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>FOLD_HELPY (P56467) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 290

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 46/101 (45%), Positives = 61/101 (60%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRK 316
           A A+VS+ H  T +       ADIV    G+  +IK   +K GA V+D+G N ++D    
Sbjct: 185 AGASVSVCHILTKDISFYTQNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHLNDG--- 241

Query: 315 SGYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTV 193
              R+VGDVDF    KVAG +TPVP GVGPMT+  LL+NT+
Sbjct: 242 ---RIVGDVDFNNVQKVAGFITPVPKGVGPMTIVSLLENTL 279

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>FOLD_CHLMU (Q9PKW1) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 287

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 45/99 (45%), Positives = 65/99 (65%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKS 313
           +A+V+++HS++ + + I   ADI+++A G  + +  + I     VIDVGT+ +     K 
Sbjct: 181 NASVTVLHSQSEHLKEITKTADILVSAIGVPLFVTKEMISEKCIVIDVGTSRVPADNPK- 239

Query: 312 GYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNT 196
           GY LVGDVDF     V   +TPVPGGVGPMTVAML++NT
Sbjct: 240 GYSLVGDVDFNNVVPVCQAITPVPGGVGPMTVAMLMRNT 278

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>FOLD_CHLTR (O84081) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 287

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 45/99 (45%), Positives = 64/99 (64%)
 Frame = -3

Query: 492 DATVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKS 313
           +A+V+++HS++ +   I   ADI+I+A G  + +  + I     ++DVGT+ I     K 
Sbjct: 181 NASVTLLHSQSEHLTEITRTADILISAIGVPLFVNKEMIAEKTVIMDVGTSRIPAANPK- 239

Query: 312 GYRLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNT 196
           GY LVGDVDF     V   +TPVPGGVGPMTVAML++NT
Sbjct: 240 GYILVGDVDFNNVVPVCRAITPVPGGVGPMTVAMLMRNT 278

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>FOLD_THEAC (Q05213) Probable folD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 276

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 38/102 (37%), Positives = 62/102 (60%)
 Frame = -3

Query: 486 TVSIVHSRTPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKSGY 307
           TVS+ HS+T +  ++   + IV+ A G+   +  + + PG+ VIDVG N ++D       
Sbjct: 176 TVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINYVND------- 228

Query: 306 RLVGDVDFAEASKVAGHLTPVPGGVGPMTVAMLLKNTVDGAQ 181
           ++VGD +F + S+    +TPVPGGVGP+T   +L+N V  A+
Sbjct: 229 KVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAE 270

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>FOLD_MYCPN (P75096) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 269

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 35/88 (39%), Positives = 46/88 (52%)
 Frame = -3

Query: 462 TPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKSGYRLVGDVDF 283
           TPN   ++  AD+VI A G+    K    KPG  + DVG +      R    +L GD+D 
Sbjct: 176 TPNTMELIKTADVVITAIGKPHFFKTTNFKPGVILYDVGVS------RNVLNKLCGDIDP 229

Query: 282 AEASKVAGHLTPVPGGVGPMTVAMLLKN 199
               KVA   +P PGGVGP TV  ++KN
Sbjct: 230 NGIEKVAKWWSPTPGGVGPFTVLAIMKN 257

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>FOLD_MYCGE (P47259) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 273

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 30/88 (34%), Positives = 43/88 (48%)
 Frame = -3

Query: 462 TPNPETIVCQADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKSGYRLVGDVDF 283
           TPN   ++  ADIV  A G++   +    K G  + D+G +      R    +L GD++ 
Sbjct: 176 TPNTFELIKSADIVFTAIGKSHFFQAKNFKKGVILFDIGVS------RNKQNKLCGDINP 229

Query: 282 AEASKVAGHLTPVPGGVGPMTVAMLLKN 199
               K A   T  PGGVGP TV  ++KN
Sbjct: 230 EGIEKKARWWTKTPGGVGPFTVLAIIKN 257

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>OCD2_RHIME (P58339) Ornithine cyclodeaminase 2 (EC 4.3.1.12) (OCD 2)|
          Length = 342

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -3

Query: 435 QADIVIAAA-GQAMMIKGDWIKPGAAVIDVGTN 340
           QADI+I    G+  +++ DW+KPG  ++ +GT+
Sbjct: 208 QADILITTTRGKGSLVEADWVKPGTHIVAIGTD 240

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>IKBE_HUMAN (O00221) NF-kappa-B inhibitor epsilon (NF-kappa-BIE)|
           (I-kappa-B-epsilon) (IkappaBepsilon) (IKB-epsilon)
           (IKBE)
          Length = 361

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 153 DKESTRLYPSGRRPPCSSATLPRSSAQRLQGPESGDPRPCLPPRNPHRQ 299
           D+     Y SG     S  +LP S++    GP  G P+PC  P  P ++
Sbjct: 9   DEAEESQYDSGIESLRSLRSLPESTSAPASGPSDGSPQPCTHPPGPVKE 57

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>AKAP8_HUMAN (O43823) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)|
           (AKAP 95)
          Length = 692

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 219 RSSAQRLQGPESGDPRPCLPPRNPHR 296
           R S+ R Q  ES D RPCLP  NP+R
Sbjct: 122 RESSFRFQPFESYDSRPCLPEHNPYR 147

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>RL2_BORBU (P94270) 50S ribosomal protein L2|
          Length = 277

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 496 SRRYRVDRAFTDAKSRNDCLXXXXXXXXXRPGHDDQGRLDQTRR-GSHRCRYKL 338
           S RY+   +F D    ND L         + G D  GR+   RR G H+ +Y+L
Sbjct: 12  SLRYKTTLSFDDLSKGNDPLKSLTKGKKFKSGRDSSGRISIRRRGGGHKRKYRL 65

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>AKAP8_MOUSE (Q9DBR0) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)|
           (AKAP 95)
          Length = 687

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 219 RSSAQRLQGPESGDPRPCLPPRNPHR 296
           R S+ R Q  ES D RPC+P  NP+R
Sbjct: 122 RDSSFRFQPYESYDARPCIPEHNPYR 147

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>GP111_HUMAN (Q8IZF7) Probable G-protein coupled receptor 111 (G-protein coupled|
           receptor PGR20)
          Length = 708

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 295 ANEPVPGLPGRVVDGVCTDIDDCRAWFDPVSLDHHGLAC 411
           + E VP  P  V DGVCTD   C     P +  + G +C
Sbjct: 97  SKEKVPARPHGVCDGVCTDYSQCTQPCPPDTQGNMGFSC 135

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>V_NDVU2 (Q06428) Nonstructural protein V|
          Length = 239

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +3

Query: 105 NIILTLPNHTSNRLRRDKESTRLYPSGRRPPCSSATLPRSSAQRLQGPESGDPRPCLPPR 284
           N +L++ +  SN+    K+   + P GR    S +T   S+  R Q  E+ +P    P +
Sbjct: 115 NSLLSMLDKLSNKSSNAKKGPMVKPPGRASSTSDSTAGESTKPRKQSRETAEPGQGRPWK 174

Query: 285 NPHRQ 299
             HR+
Sbjct: 175 PGHRR 179

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>CD97_MOUSE (Q9Z0M6) CD97 antigen precursor|
          Length = 818

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 301 EPVPGLPGRVVDGVCTDIDDCRAWFDPVSLDHHGLACCCNDNVC 432
           +PVPG P   V  VC D+D+C +          G   C N  VC
Sbjct: 198 KPVPGSPNGPVSTVCEDVDECSS----------GQHQCHNSTVC 231

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>LRP2_HUMAN (P98164) Low-density lipoprotein receptor-related protein 2 precursor|
            (Megalin) (Glycoprotein 330) (gp330)
          Length = 4655

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 334  DGVCTDIDDCRAWFDPVSLDHHGLACCCNDNVC 432
            D VC D DDC  W D +   + G    C +N+C
Sbjct: 3944 DNVCDDADDCGDWSDELGC-NKGKERTCAENIC 3975

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>B3GA2_CANFA (Q5CAZ6) Galactosylgalactosylxylosylprotein|
           3-beta-glucuronosyltransferase 2 (EC 2.4.1.135)
           (Beta-1,3-glucuronyltransferase 2)
           (Glucuronosyltransferase-S) (GlcAT-S)
           (UDP-glucuronosyltransferase-S) (GlcAT-D)
          Length = 329

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -2

Query: 283 RGGKQ---GRGSPDSGPWRRWADDRGNVAEEHGGRRPE 179
           RGG +    RG PDSGP R W  ++ N +  H   RPE
Sbjct: 47  RGGARLPPRRGGPDSGPGRGW--EKRNESRPHARPRPE 82

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>PRRT1_MOUSE (O35449) Proline-rich transmembrane protein 1|
          Length = 306

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +3

Query: 180 SGRRPPCSSATLPRSSAQRLQGPESGDPRP---CLP--PRNPHRQ 299
           S +R P SSATLPR       GP +G P P    LP  P +P+ Q
Sbjct: 70  SAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQ 114

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>SECD_MYCLE (P38387) Protein-export membrane protein secD|
          Length = 571

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = +3

Query: 105 NIILTLPNHTSNRLRRDKESTRLYPSGRRPPCSSATLPRSSAQRLQGPESGDPRPCLP 278
           N+++T+P +  N  R   ++ RLY    RP  +S  LP    QR Q P+ G P   LP
Sbjct: 94  NLVITVPGNDGNEARNLGQTARLY---IRPVLNS--LP---VQRGQDPKPGSPAGTLP 143

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>MATR3_MOUSE (Q8K310) Matrin-3|
          Length = 846

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 108 IILTLPNHTSNRLRRDKESTRLY-PSGRRPPCSSATLPRSSAQRLQGPESG 257
           ++L +PN   + L++DK   R Y P G+  P    +  ++ AQ+ + P  G
Sbjct: 575 LVLRIPNRGIDLLKKDKSRKRSYSPDGKESPSDKKS--KTDAQKTESPAEG 623

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>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding|
           protein MBD6)
          Length = 1003

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 183 GRRPPCSSATLPRSSA-QRLQGPESGDPRPCLPPRNP 290
           G  PP S A+ P +   Q LQ P      PCLPP +P
Sbjct: 782 GAPPPLSEASSPLACLLQSLQIPPEQPEAPCLPPESP 818

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>DCUD_ECOLI (P45428) Putative cryptic C4-dicarboxylate transporter dcuD|
          Length = 455

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 426 IVIAAAGQAMMIKGDWIKPGAAVIDVGTNSIDDPTRKSGYRLV 298
           +V+AAAG  +M+ G W+         G   + DPT+ SGY +V
Sbjct: 26  VVLAAAGIFLMMCGVWL---------GFGGVLDPTKSSGYLIV 59

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>AKAP8_RAT (Q63014) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)|
           (AKAP 95)
          Length = 687

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 219 RSSAQRLQGPESGDPRPCLPPRNPHR 296
           R S+ R Q  ES D RPC+P   P+R
Sbjct: 122 RDSSFRFQPYESYDSRPCMPEHTPYR 147

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>DISJ_BOTJA (P30431) Venom metalloproteinase jararhagin precursor (EC|
           3.4.24.73) (HF2-proteinase) [Contains: Disintegrin
           jararhagin] (Fragment)
          Length = 571

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 163 LQDYTPLGAVHRVLQQHCHGHRPNASRDRSQVT-RDLACLREIHIANEP 306
           +QDY+P+  V  V+  H  GH      D    +  D  C+    I+NEP
Sbjct: 279 VQDYSPINLVVAVIMAHEMGHNLGIHHDTGSCSCGDYPCIMGPTISNEP 327

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>ZN307_HUMAN (Q969J2) Zinc finger protein 307 (P373c6.1)|
          Length = 545

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +3

Query: 153 DKESTRLYPSGRRPPCSSATLPRSSAQRLQG---PESGDPRPCL 275
           +KE      +  R PCS A  P  S QR +G   PE+  PR  L
Sbjct: 28  EKEEASALTAEVRAPCSPARGPERSRQRFRGFRYPEAAGPREAL 71

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>PRRT1_HUMAN (Q99946) Proline-rich transmembrane protein 1|
          Length = 306

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +3

Query: 180 SGRRPPCSSATLPRSSAQRLQGPESGDPRP---CLP--PRNPHRQ 299
           + +R P SSATLPR       GP +G P P    LP  P +P+ Q
Sbjct: 70  TAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQ 114

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>SAM68_RAT (Q91V33) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
 Frame = +3

Query: 156 KESTRLYPSGRRPPCSSATLPRSSAQRLQGPESG-------DPRPCLPPRNP 290
           K+ +  +PS R  P   + LP  S     GP  G        P P LPP NP
Sbjct: 21  KDPSGAHPSVRLTPSRPSPLPHRSRGGGGGPRGGARASPATQPPPLLPPSNP 72

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>MURE_BRUSU (Q8FZP0) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 488

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 13/95 (13%)
 Frame = -3

Query: 495 ADATVSIVHSRTPNPETIVC-------QADIVIAAAGQ------AMMIKGDWIKPGAAVI 355
           ADA V ++H   P     +        Q ++++A  G       A   +  W   G    
Sbjct: 72  ADAGVPVLHVDDPRHVLAIAAAQFYGKQPEVMVAVTGTSGKTSVASFTRQIWAYAGFPAA 131

Query: 354 DVGTNSIDDPTRKSGYRLVGDVDFAEASKVAGHLT 250
           ++GT  +  PTR S Y  +   D  E  +V   LT
Sbjct: 132 NIGTTGVFSPTR-SDYNSLTTPDPVELHRVLAELT 165

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>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 243 GPESGDPRPCLPPRNPHRQR 302
           GP  G P+P LPP  PH+Q+
Sbjct: 48  GPGPGGPKPPLPPPPPHQQQ 67

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>CD97_HUMAN (P48960) CD97 antigen precursor (Leukocyte antigen CD97)|
          Length = 835

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
 Frame = +1

Query: 301 EPVPGLPGRVVDGVCTDIDDCRAWFDPVSLDHHGLACCCNDNVCLTDNRFGIW----RP* 468
           +P+PG P    + VC D+D+C +          G   C +  VC   N  G +    RP 
Sbjct: 193 QPIPGSPNGPNNTVCEDVDECSS----------GQHQCDSSTVCF--NTVGSYSCRCRPG 240

Query: 469 MHDRHG 486
              RHG
Sbjct: 241 WKPRHG 246

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>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = +3

Query: 129 HTSNRLRRDKESTRLYPSGRRPPCSSATLPRSSAQRLQGPESGDPRPCLPPRNP 290
           H+  ++RR +      P  R P   S   PRS+  R     SGD  P   P  P
Sbjct: 219 HSGLQMRRARSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTP 272

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>MATR3_RAT (P43244) Matrin-3 (Nuclear scaffold protein P130/MAT3)|
          Length = 845

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 108 IILTLPNHTSNRLRRDKESTRLY-PSGRRPPCSSATLPRSSAQRLQGPESG 257
           ++L +PN   + L++DK   R Y P G+  P S        AQ+ + P  G
Sbjct: 575 LVLRIPNRGIDLLKKDKSRKRSYSPDGKESP-SDKKSKTDGAQKTENPAEG 624

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>EMR2_HUMAN (Q9UHX3) EGF-like module-containing mucin-like hormone|
           receptor-like 2 precursor (EGF-like module EMR2) (CD312
           antigen)
          Length = 823

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
 Frame = +1

Query: 301 EPVPGLPGRVVDGVCTDIDDCRAWFDPVSLDHHGLACCCNDNVCLTDNRFGIW----RP* 468
           +P+PG P    + VC D+D+C +          G   C +  VC   N  G +    RP 
Sbjct: 196 QPIPGSPNGPNNTVCEDVDECSS----------GQHQCDSSTVCF--NTVGSYSCRCRPG 243

Query: 469 MHDRHG 486
              RHG
Sbjct: 244 WKPRHG 249

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>AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)|
           (AKAP 95)
          Length = 698

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 219 RSSAQRLQGPESGDPRPCLPPRNPHR 296
           R S+ R Q  ES D R CLP  +P+R
Sbjct: 121 RESSFRFQSYESYDSRSCLPEHHPYR 146

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>KRAF1_CAEEL (Q07292) Raf homolog serine/threonine-protein kinase (EC 2.7.11.1)|
           (Abnormal cell lineage protein 45)
          Length = 813

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 74  RTGFSLGTQLQHHPHITKSHVKSVAAR*RIYKTI 175
           +TG  L TQ +H PH    H+ S A   R++  +
Sbjct: 347 KTGSLLSTQARHRPHFQSGHILSGARMNRLHPLV 380

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>SYN3_HUMAN (O14994) Synapsin-3 (Synapsin III)|
          Length = 580

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +3

Query: 177 PSGRRPPCSSATLPRSSAQRLQGPESGDPRPCLPPRNPHRQ 299
           PS  RP        +S  Q   GP+ G P+P  PP+   RQ
Sbjct: 404 PSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQ 444


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,187,879
Number of Sequences: 219361
Number of extensions: 1651031
Number of successful extensions: 6243
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6208
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result