ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103505.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
2gb|AY106093.1| Zea mays PCO112665 mRNA sequence 230 3e-57
3ref|XM_493923.1| Oryza sativa (japonica cultivar-group), predic... 192 8e-46
4gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome... 190 3e-45
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
6dbj|AK104502.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 3e-45
7dbj|AK060882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 3e-45
8emb|AJ011589.1|PSA011589 Pisum sativum mRNA for bifunctional 5,1... 76 1e-10
9gb|AF030516.1|AF030516 Pisum sativum 5,10-methylenetetrahydrofol... 76 1e-10
10gb|AF439724.1|AF439724 Zea mays methylenetetrahydrofolate dehydr... 56 1e-04
11gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 54 4e-04
12ref|NM_001031360.1| Gallus gallus methylenetetrahydrofolate dehy... 48 0.028
13gb|AC120002.24| Mus musculus chromosome 12, clone RP24-147D14, c... 48 0.028
14ref|NM_138745.1| Mus musculus methylenetetrahydrofolate dehydrog... 48 0.028
15gb|AC124453.3| Mus musculus BAC clone RP24-225A16 from chromosom... 48 0.028
16gb|BC008523.1| Mus musculus methylenetetrahydrofolate dehydrogen... 48 0.028
17gb|BC013563.1| Mus musculus methylenetetrahydrofolate dehydrogen... 48 0.028
18emb|AJ720179.1| Gallus gallus mRNA for hypothetical protein, clo... 48 0.028
19gb|AF364583.1|F364580S04 Mus musculus C1-tetrahydrofolate syntha... 48 0.028
20gb|AF364579.1| Mus musculus C1-tetrahydrofolate synthase (Dcs) m... 48 0.028
21dbj|AK129012.1| Mus musculus cDNA fis, clone TRACH3032065, highl... 48 0.028
22dbj|AK133848.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 48 0.028
23dbj|AK159812.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 48 0.028
24dbj|AK165951.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-... 48 0.028
25dbj|AK088700.1| Mus musculus 2 days neonate thymus thymic cells ... 48 0.028
26dbj|AK042958.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 48 0.028
27dbj|AK213959.1| Mus musculus cDNA, clone:Y2G0130B22, strand:minu... 48 0.028
28gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 46 0.11
29gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 46 0.11
30ref|XM_547891.2| PREDICTED: Canis familiaris similar to papilin ... 44 0.43
31dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 42 1.7
32ref|NM_022508.1| Rattus norvegicus methylenetetrahydrofolate deh... 40 6.8
33gb|BC082827.1| Xenopus laevis kinesine, mRNA (cDNA clone MGC:800... 40 6.8
34emb|AJ249548.1|EMU249548 Echinococcus multilocularis Tub-1 gene ... 40 6.8
35ref|XM_539316.2| PREDICTED: Canis familiaris similar to methylen... 40 6.8
36gb|BC042218.1| Xenopus laevis similar to kinesin-like 1, mRNA (c... 40 6.8
37ref|XM_970845.1| PREDICTED: Tribolium castaneum similar to CG406... 40 6.8
38ref|XM_970804.1| PREDICTED: Tribolium castaneum similar to CG406... 40 6.8
39ref|XM_970768.1| PREDICTED: Tribolium castaneum similar to CG406... 40 6.8
40ref|XM_961261.1| PREDICTED: Tribolium castaneum similar to CG406... 40 6.8
41emb|X71864.1|XLKLP X.laevis mRNA for kinesin-like protein 40 6.8
42emb|X54002.1|XLKINESIN X.laevis mRNA for kinesine 40 6.8
43gb|BC089800.1| Rattus norvegicus methylenetetrahydrofolate dehyd... 40 6.8
44emb|AL022103.1|SPBC2G2 S.pombe chromosome II cosmid c2G2 40 6.8
45dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.8
46gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell... 40 6.8
47gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.8
48ref|NM_001022356.1| Schizosaccharomyces pombe 972h- hypothetical... 40 6.8
49gb|AC079028.11|AC079028 Arabidopsis thaliana chromosome 1 BAC T3... 40 6.8
50dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
51gb|AC035249.7|AC035249 Arabidopsis thaliana chromosome 1 BAC F8D... 40 6.8
52gb|AC068901.8|AC068901 Arabidopsis thaliana chromosome 1 BAC F1O... 40 6.8
53dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
54dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
55dbj|AK208410.1| Mus musculus cDNA, clone:Y2G0111C21, strand:plus... 40 6.8
56dbj|AK068349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
57gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 6.8
58emb|BX005130.10| Mouse DNA sequence from clone RP23-475L14 on ch... 40 6.8
59gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 6.8
60gb|AC140934.1| Gallus gallus BAC clone TAM31-90J8 from chromosom... 40 6.8
61gb|J05519.1|RATC1H4SY Rat C1-tetrahydrofolate synthase mRNA, com... 40 6.8 
>dbj|AK103505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131D02, full
           insert sequence
          Length = 1118

 Score =  252 bits (127), Expect = 1e-63
 Identities = 238/275 (86%)
 Strand = Plus / Minus

                                                                       
Query: 191 tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 250
           ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 964 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 905

                                                                       
Query: 251 gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 310
           ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 904 gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 845

                                                                       
Query: 311 ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 370
           || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 844 cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 785

                                                                       
Query: 371 ggtttgatccagtctcccttgatcatcatggcctggcctgctgctgcaatgacaatgtct 430
           ||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 784 ggtttgatccagtctcctttgatcatcatagcctggccagccgctgcaatgacaatgtct 725

                                              
Query: 431 gcttgacagacaatcgtttcgggatttggcgtccg 465
           |||| || ||||||  |||| || ||||| |||||
Sbjct: 724 gcttcacggacaatactttcagggtttggggtccg 690
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>gb|AY106093.1| Zea mays PCO112665 mRNA sequence
          Length = 1087

 Score =  230 bits (116), Expect = 3e-57
 Identities = 212/244 (86%)
 Strand = Plus / Minus

                                                                       
Query: 191 tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 250
           ||||||||||||||||||| ||||||||| ||||| || ||||||||||| || ||||||
Sbjct: 879 tccaccgtgttcttcagcagcattgccaccgtcattgggccaacgcctccgggaaccgga 820

                                                                       
Query: 251 gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 310
           |||||||  || || |||||||| ||| | ||||||||||||||||| ||||||| ||||
Sbjct: 819 gtcaggtacccagcaaccttgctcgccgctgcgaaatccacatcgccgacgagccggtac 760

                                                                       
Query: 311 ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 370
           |||||||||| ||||||||| ||||||||||| || |||||||||||||| || || |||
Sbjct: 759 ccggacttccgggtagggtcatcgatggagttcgtcccgacatcgatgaccgcagcacct 700

                                                                       
Query: 371 ggtttgatccagtctcccttgatcatcatggcctggcctgctgctgcaatgacaatgtct 430
           || ||||||||||| || ||||||||||| ||||| || ||||| || ||||| ||||| 
Sbjct: 699 ggcttgatccagtcacctttgatcatcatagcctgcccagctgccgcgatgactatgtca 640

               
Query: 431 gctt 434
           ||||
Sbjct: 639 gctt 636
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>ref|XM_493923.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score =  192 bits (97), Expect = 8e-46
 Identities = 231/275 (84%), Gaps = 3/275 (1%)
 Strand = Plus / Minus

                                                                       
Query: 191 tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 250
           ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 848 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 789

                                                                       
Query: 251 gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 310
           ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 788 gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 729

                                                                       
Query: 311 ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 370
           || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 728 cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 669

                                                                       
Query: 371 ggtttgatccagtctcccttgatcatcatggcctggcctgctgctgcaatgacaatgtct 430
           |||||||||||||     |  | |||||| |||||||| || ||||||||||||||||||
Sbjct: 668 ggtttgatccagt---aatgtaccatcatagcctggccagccgctgcaatgacaatgtct 612

                                              
Query: 431 gcttgacagacaatcgtttcgggatttggcgtccg 465
           |||| || ||||||  |||| || ||||| |||||
Sbjct: 611 gcttcacggacaatactttcagggtttggggtccg 577
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>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07,
             complete sequence
          Length = 164898

 Score =  190 bits (96), Expect = 3e-45
 Identities = 177/204 (86%)
 Strand = Plus / Minus

                                                                         
Query: 191   tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 250
             ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 62143 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 62084

                                                                         
Query: 251   gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 310
             ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 62083 gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 62024

                                                                         
Query: 311   ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 370
             || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 62023 cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 61964

                                     
Query: 371   ggtttgatccagtctcccttgatc 394
             ||||||||||||||||| ||||||
Sbjct: 61963 ggtttgatccagtctcctttgatc 61940



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 394   catcatggcctggcctgctgctgcaatgacaatgtctgcttgacagacaatcgtttcggg 453
             |||||| |||||||| || |||||||||||||||||||||| || ||||||  |||| ||
Sbjct: 61858 catcatagcctggccagccgctgcaatgacaatgtctgcttcacggacaatactttcagg 61799

                         
Query: 454   atttggcgtccg 465
              ||||| |||||
Sbjct: 61798 gtttggggtccg 61787
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  190 bits (96), Expect = 3e-45
 Identities = 177/204 (86%)
 Strand = Plus / Minus

                                                                           
Query: 191     tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 250
               ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 2867532 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 2867473

                                                                           
Query: 251     gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 310
               ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 2867472 gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 2867413

                                                                           
Query: 311     ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 370
               || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 2867412 cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 2867353

                                       
Query: 371     ggtttgatccagtctcccttgatc 394
               ||||||||||||||||| ||||||
Sbjct: 2867352 ggtttgatccagtctcctttgatc 2867329



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                           
Query: 394     catcatggcctggcctgctgctgcaatgacaatgtctgcttgacagacaatcgtttcggg 453
               |||||| |||||||| || |||||||||||||||||||||| || ||||||  |||| ||
Sbjct: 2867247 catcatagcctggccagccgctgcaatgacaatgtctgcttcacggacaatactttcagg 2867188

                           
Query: 454     atttggcgtccg 465
                ||||| |||||
Sbjct: 2867187 gtttggggtccg 2867176
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>dbj|AK104502.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F01, full
            insert sequence
          Length = 1209

 Score =  190 bits (96), Expect = 3e-45
 Identities = 177/204 (86%)
 Strand = Plus / Minus

                                                                        
Query: 191  tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 250
            ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 1055 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 996

                                                                        
Query: 251  gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 310
            ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 995  gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 936

                                                                        
Query: 311  ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 370
            || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 935  cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 876

                                    
Query: 371  ggtttgatccagtctcccttgatc 394
            ||||||||||||||||| ||||||
Sbjct: 875  ggtttgatccagtctcctttgatc 852



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                       
Query: 394 catcatggcctggcctgctgctgcaatgacaatgtctgcttgacagacaatcgtttcggg 453
           |||||| |||||||| || |||||||||||||||||||||| || ||||||  |||| ||
Sbjct: 770 catcatagcctggccagccgctgcaatgacaatgtctgcttcacggacaatactttcagg 711

                       
Query: 454 atttggcgtccg 465
            ||||| |||||
Sbjct: 710 gtttggggtccg 699
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>dbj|AK060882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A12, full
            insert sequence
          Length = 1209

 Score =  190 bits (96), Expect = 3e-45
 Identities = 177/204 (86%)
 Strand = Plus / Minus

                                                                        
Query: 191  tccaccgtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccgga 250
            ||||||||||||||||||||||| ||||| ||||| || |||||||| || ||||| |||
Sbjct: 1055 tccaccgtgttcttcagcaacatcgccaccgtcatggggccaacgccacctgggactgga 996

                                                                        
Query: 251  gtcaggtgacccgcgaccttgcttgcctccgcgaaatccacatcgccaacgagcctgtac 310
            ||||||||||| || ||||||||  |||| ||||||||||||||||| ||||| ||||||
Sbjct: 995  gtcaggtgaccagcaaccttgctcacctctgcgaaatccacatcgccgacgagtctgtac 936

                                                                        
Query: 311  ccggacttcctggtagggtcgtcgatggagtttgtaccgacatcgatgactgccgcgcct 370
            || || |||||||| |||||   ||||||||| || || || |||||||| || ||||||
Sbjct: 935  cccgatttcctggttgggtcactgatggagttcgtcccaacgtcgatgacagcagcgcct 876

                                    
Query: 371  ggtttgatccagtctcccttgatc 394
            ||||||||||||||||| ||||||
Sbjct: 875  ggtttgatccagtctcctttgatc 852



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                       
Query: 394 catcatggcctggcctgctgctgcaatgacaatgtctgcttgacagacaatcgtttcggg 453
           |||||| |||||||| || |||||||||||||||||||||| || ||||||  |||| ||
Sbjct: 770 catcatagcctggccagccgctgcaatgacaatgtctgcttcacggacaatactttcagg 711

                       
Query: 454 atttggcgtccg 465
            ||||| |||||
Sbjct: 710 gtttggggtccg 699
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>emb|AJ011589.1|PSA011589 Pisum sativum mRNA for bifunctional 5,10-methylene-
           tetrahydrofolate dehydrogenase and
           5,10-methenyltetrahydrofolate cyclohydrolase protein
          Length = 1219

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 341 tttgtaccgacatcgatgactgccgcgcctggtttgatccagtctcccttgatcatcatg 400
           ||||| || ||||| || ||||| || |||||||| ||||||  ||||||||||||| | 
Sbjct: 768 tttgtgccaacatctatcactgcagctcctggttttatccagcttcccttgatcatcttt 709

                                             
Query: 401 gcctggcctgctgctgcaatgacaatgtctgctt 434
           ||||| |||||||||||||| ||||| |||||||
Sbjct: 708 gcctgtcctgctgctgcaataacaatatctgctt 675
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>gb|AF030516.1|AF030516 Pisum sativum 5,10-methylenetetrahydrofolate
           dehydrogenase-5,10-methenyltetrahydrofolate
           cyclohydrolase mRNA, complete cds
          Length = 1219

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 341 tttgtaccgacatcgatgactgccgcgcctggtttgatccagtctcccttgatcatcatg 400
           ||||| || ||||| || ||||| || |||||||| ||||||  ||||||||||||| | 
Sbjct: 768 tttgtgccaacatctatcactgcagctcctggttttatccagcttcccttgatcatcttt 709

                                             
Query: 401 gcctggcctgctgctgcaatgacaatgtctgctt 434
           ||||| |||||||||||||| ||||| |||||||
Sbjct: 708 gcctgtcctgctgctgcaataacaatatctgctt 675
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>gb|AF439724.1|AF439724 Zea mays methylenetetrahydrofolate
           dehydrogenase/methylenetetrahydrofolate cylcohydrolase
           isoform 1 mRNA, partial cds
          Length = 480

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 359 actgccgcgcctggtttgatccagtctcccttgatcatcatggcctggcctgctgctgca 418
           ||||| ||||| ||||||||||||   || ||||||||||| ||||| ||||| || |||
Sbjct: 338 actgcagcgccaggtttgatccagctgcctttgatcatcatagcctgtcctgcggcagca 279

                           
Query: 419 atgacaatgtctgctt 434
           || | |||||||||||
Sbjct: 278 ataataatgtctgctt 263
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 208    caacattgccacggtcatcggcccaacgcctccagggac 246
              ||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 821072 caacattgcaacggtcattggcccaacgccaccagggac 821110
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>ref|NM_001031360.1| Gallus gallus methylenetetrahydrofolate dehydrogenase (NADP+
            dependent) 2, methenyltetrahydrofolate cyclohydrolase
            (MTHFD2), mRNA
          Length = 1703

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 197  gtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccggagt 252
            |||||||||| || ||| || || ||||| |||||||| || ||||||||||||||
Sbjct: 1002 gtgttcttcatcagcatggcaactgtcatgggcccaactcccccagggaccggagt 947
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>gb|AC120002.24| Mus musculus chromosome 12, clone RP24-147D14, complete sequence
          Length = 179305

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 211    cattgccacggtcatcggcccaacgcctccagggac 246
              ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 126161 cattgccacggtcatgggccccacgccaccagggac 126126
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>ref|NM_138745.1| Mus musculus methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase (Mthfd1), mRNA
          Length = 3159

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 942 cattgccacggtcatgggccccacgccaccagggac 907
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>gb|AC124453.3| Mus musculus BAC clone RP24-225A16 from chromosome 12, complete
             sequence
          Length = 184665

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 211   cattgccacggtcatcggcccaacgcctccagggac 246
             ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 10815 cattgccacggtcatgggccccacgccaccagggac 10780
to top
>gb|BC008523.1| Mus musculus methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, mRNA (cDNA clone
           MGC:6417 IMAGE:3590449), complete cds
          Length = 3159

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 942 cattgccacggtcatgggccccacgccaccagggac 907
to top
>gb|BC013563.1| Mus musculus methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, mRNA (cDNA clone
           IMAGE:3590876)
          Length = 2511

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 255 cattgccacggtcatgggccccacgccaccagggac 220
to top
>emb|AJ720179.1| Gallus gallus mRNA for hypothetical protein, clone 12b8
          Length = 1703

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 197  gtgttcttcagcaacattgccacggtcatcggcccaacgcctccagggaccggagt 252
            |||||||||| || ||| || || ||||| |||||||| || ||||||||||||||
Sbjct: 1002 gtgttcttcatcagcatggcaactgtcatgggcccaactcccccagggaccggagt 947
to top
>gb|AF364583.1|F364580S04 Mus musculus C1-tetrahydrofolate synthase (Dcs) gene, exons 9, 10,
            and 11
          Length = 2551

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 211  cattgccacggtcatcggcccaacgcctccagggac 246
            ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 1600 cattgccacggtcatgggccccacgccaccagggac 1565
to top
>gb|AF364579.1| Mus musculus C1-tetrahydrofolate synthase (Dcs) mRNA, complete cds
          Length = 2865

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 899 cattgccacggtcatgggccccacgccaccagggac 864
to top
>dbj|AK129012.1| Mus musculus cDNA fis, clone TRACH3032065, highly similar to
            C-1-tetrahydrofolate synthase, cytoplasmic
          Length = 3240

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 211  cattgccacggtcatcggcccaacgcctccagggac 246
            ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 1052 cattgccacggtcatgggccccacgccaccagggac 1017
to top
>dbj|AK133848.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730448C09
           product:methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, full insert sequence
          Length = 3042

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 853 cattgccacggtcatgggccccacgccaccagggac 818
to top
>dbj|AK159812.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420031N06
           product:methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, full insert sequence
          Length = 3118

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 930 cattgccacggtcatgggccccacgccaccagggac 895
to top
>dbj|AK165951.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched
           library, clone:G730023A08
           product:methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, full insert sequence
          Length = 3143

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 950 cattgccacggtcatgggccccacgccaccagggac 915
to top
>dbj|AK088700.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430024A07
           product:C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC
           (C1-THF SYNTHASE) [INCLUDES: METHYLENETETRAHYDROFOLATE
           DEHYDROGENASE (EC 1.5.1.5); METHENYLTETRAHYDROFOLATE
           CYCLOHYDROLASE (EC 3.5.4.9); FORMYLTETRAHYDROFOLATE
           SYNTHETASE (EC 6.3.4.3)] homolog [Rattus norvegicus],
           full insert sequence
          Length = 3103

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 915 cattgccacggtcatgggccccacgccaccagggac 880
to top
>dbj|AK042958.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730043L04
           product:C1-tetrahydrofolate synthase homolog [Rattus
           norvegicus], full insert sequence
          Length = 2302

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 954 cattgccacggtcatgggccccacgccaccagggac 919
to top
>dbj|AK213959.1| Mus musculus cDNA, clone:Y2G0130B22, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000021443, based on BLAT search
          Length = 385

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| ||||||||
Sbjct: 88  cattgccacggtcatgggccccacgccaccagggac 53
to top
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 209    aacattgccacggtcatcggcccaacgcctccagg 243
              ||||||||||| |||||||| |||||||| |||||
Sbjct: 884199 aacattgccactgtcatcggaccaacgccaccagg 884165
to top
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 208    caacattgccacggtcatcggcccaacgcctccagggac 246
              ||||||||| |||||||| ||||||||||| || |||||
Sbjct: 640114 caacattgcaacggtcattggcccaacgccaccggggac 640152
to top
>ref|XM_547891.2| PREDICTED: Canis familiaris similar to papilin (LOC490769), mRNA
          Length = 3756

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 396  tcatggcctggcctgctgctgc 417
            ||||||||||||||||||||||
Sbjct: 2669 tcatggcctggcctgctgctgc 2648
to top
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 385    tcccttgatcatcatggcctg 405
              |||||||||||||||||||||
Sbjct: 454291 tcccttgatcatcatggcctg 454311
to top
>ref|NM_022508.1| Rattus norvegicus methylenetetrahydrofolate dehydrogenase (NADP+
            dependent), methenyltetrahydrofolate cyclohydrolase,
            formyltetrahydrofolate synthase (Mthfd1), mRNA
          Length = 3332

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 211  cattgccacggtcatcggcccaacgcctccagggac 246
            ||||||||||||||| ||||| ||||| || |||||
Sbjct: 1152 cattgccacggtcatgggccccacgccaccggggac 1117
to top
>gb|BC082827.1| Xenopus laevis kinesine, mRNA (cDNA clone MGC:80002 IMAGE:5049026),
            complete cds
          Length = 3613

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  ggtcgtcgatggagtttgta 346
            ||||||||||||||||||||
Sbjct: 1807 ggtcgtcgatggagtttgta 1788
to top
>emb|AJ249548.1|EMU249548 Echinococcus multilocularis Tub-1 gene for beta-tubulin, exons 1-3
          Length = 5157

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  gttctcgaaattgcgtaaag 59
           ||||||||||||||||||||
Sbjct: 457 gttctcgaaattgcgtaaag 438
to top
>ref|XM_539316.2| PREDICTED: Canis familiaris similar to methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 2-like (LOC482197), mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 197 gtgttcttcagcaacattgccacggtcatcggcccaacgcctcc 240
           ||||||||||| | ||||||||| ||||| || || ||||||||
Sbjct: 902 gtgttcttcagaagcattgccaccgtcatgggtcccacgcctcc 859
to top
>gb|BC042218.1| Xenopus laevis similar to kinesin-like 1, mRNA (cDNA clone MGC:52588
            IMAGE:5570491), complete cds
          Length = 3684

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  ggtcgtcgatggagtttgta 346
            ||||||||||||||||||||
Sbjct: 1864 ggtcgtcgatggagtttgta 1845
to top
>ref|XM_970845.1| PREDICTED: Tribolium castaneum similar to CG4067-PA, isoform A,
           transcript variant 5 (LOC656820), mRNA
          Length = 2929

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 209 aacattgccacggtcatcggcccaacgcctccagggaccggagt 252
           ||||||||||| ||||| || || || ||||||||||| |||||
Sbjct: 888 aacattgccactgtcatggggcctacacctccagggactggagt 845
to top
>ref|XM_970804.1| PREDICTED: Tribolium castaneum similar to CG4067-PA, isoform A,
           transcript variant 4 (LOC656820), mRNA
          Length = 3026

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 209 aacattgccacggtcatcggcccaacgcctccagggaccggagt 252
           ||||||||||| ||||| || || || ||||||||||| |||||
Sbjct: 985 aacattgccactgtcatggggcctacacctccagggactggagt 942
to top
>ref|XM_970768.1| PREDICTED: Tribolium castaneum similar to CG4067-PA, isoform A,
           transcript variant 3 (LOC656820), mRNA
          Length = 2213

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 209 aacattgccacggtcatcggcccaacgcctccagggaccggagt 252
           ||||||||||| ||||| || || || ||||||||||| |||||
Sbjct: 172 aacattgccactgtcatggggcctacacctccagggactggagt 129
to top
>ref|XM_961261.1| PREDICTED: Tribolium castaneum similar to CG4067-PA, isoform A,
            transcript variant 1 (LOC656820), mRNA
          Length = 3041

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 209  aacattgccacggtcatcggcccaacgcctccagggaccggagt 252
            ||||||||||| ||||| || || || ||||||||||| |||||
Sbjct: 1000 aacattgccactgtcatggggcctacacctccagggactggagt 957
to top
>emb|X71864.1|XLKLP X.laevis mRNA for kinesin-like protein
          Length = 3420

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  ggtcgtcgatggagtttgta 346
            ||||||||||||||||||||
Sbjct: 1844 ggtcgtcgatggagtttgta 1825
to top
>emb|X54002.1|XLKINESIN X.laevis mRNA for kinesine
          Length = 3651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  ggtcgtcgatggagtttgta 346
            ||||||||||||||||||||
Sbjct: 1880 ggtcgtcgatggagtttgta 1861
to top
>gb|BC089800.1| Rattus norvegicus methylenetetrahydrofolate dehydrogenase (NADP+
           dependent), methenyltetrahydrofolate cyclohydrolase,
           formyltetrahydrofolate synthase, mRNA (cDNA clone
           MGC:108690 IMAGE:7323085), complete cds
          Length = 3089

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| ||||| || |||||
Sbjct: 866 cattgccacggtcatgggccccacgccaccggggac 831
to top
>emb|AL022103.1|SPBC2G2 S.pombe chromosome II cosmid c2G2
          Length = 36493

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 221   gtcatcggcccaacgcctccagggaccggagt 252
             |||||||| || |||||||||||||| |||||
Sbjct: 14934 gtcatcggtccgacgcctccagggacaggagt 14903
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                               
Query: 350     acatcgatgactgccgcgcctggtttgatccagtctcccttgatcatc 397
               ||||||||||| |  ||||| || || |||||||| ||||||||||||
Sbjct: 4778836 acatcgatgaccgtggcgcccggcttaatccagtcgcccttgatcatc 4778883
to top
>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179283

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   gctgctgcaatgacaatgtctgct 433
             |||||||||||||||||| |||||
Sbjct: 78365 gctgctgcaatgacaatgactgct 78388
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 289     cacatcgccaacgagcctgt 308
               ||||||||||||||||||||
Sbjct: 3051982 cacatcgccaacgagcctgt 3051963



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    cacatcgccaacgagcctgt 308
              ||||||||||||||||||||
Sbjct: 346853 cacatcgccaacgagcctgt 346834
to top
>ref|NM_001022356.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC2G2.08),
           partial mRNA
          Length = 2910

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 221 gtcatcggcccaacgcctccagggaccggagt 252
           |||||||| || |||||||||||||| |||||
Sbjct: 908 gtcatcggtccgacgcctccagggacaggagt 877
to top
>gb|AC079028.11|AC079028 Arabidopsis thaliana chromosome 1 BAC T32O22 genomic sequence,
            complete sequence
          Length = 50349

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   tcagttacaacatcatcctc 116
            ||||||||||||||||||||
Sbjct: 1343 tcagttacaacatcatcctc 1324
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 98      cagttacaacatcatcctca 117
               ||||||||||||||||||||
Sbjct: 7724470 cagttacaacatcatcctca 7724451
to top
>gb|AC035249.7|AC035249 Arabidopsis thaliana chromosome 1 BAC F8D11 genomic sequence,
            complete sequence
          Length = 109431

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   tcagttacaacatcatcctc 116
            ||||||||||||||||||||
Sbjct: 9025 tcagttacaacatcatcctc 9006
to top
>gb|AC068901.8|AC068901 Arabidopsis thaliana chromosome 1 BAC F1O3 genomic sequence, complete
             sequence
          Length = 74265

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    tcagttacaacatcatcctc 116
             ||||||||||||||||||||
Sbjct: 29826 tcagttacaacatcatcctc 29845
to top
>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0010K01
          Length = 144404

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    cagttacaacatcatcctca 117
             ||||||||||||||||||||
Sbjct: 27051 cagttacaacatcatcctca 27032
to top
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0086P08
          Length = 145312

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     cagttacaacatcatcctca 117
              ||||||||||||||||||||
Sbjct: 135046 cagttacaacatcatcctca 135027
to top
>dbj|AK208410.1| Mus musculus cDNA, clone:Y2G0111C21, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000021443, based on BLAT search
          Length = 383

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 211 cattgccacggtcatcggcccaacgcctccagggac 246
           ||||||||||||||| ||||| |||||  |||||||
Sbjct: 344 cattgccacggtcatgggccccacgccagcagggac 309
to top
>dbj|AK068349.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136B15, full
            insert sequence
          Length = 1222

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   cagttacaacatcatcctca 117
            ||||||||||||||||||||
Sbjct: 1160 cagttacaacatcatcctca 1141
to top
>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    gctgctgcaatgacaatgtctgct 433
              |||||||||||||||||| |||||
Sbjct: 121382 gctgctgcaatgacaatgactgct 121405
to top
>emb|BX005130.10| Mouse DNA sequence from clone RP23-475L14 on chromosome 2, complete
             sequence
          Length = 127298

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 397   catggcctggcctgctgctg 416
             ||||||||||||||||||||
Sbjct: 69510 catggcctggcctgctgctg 69491
to top
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 215    gccacggtcatcggcccaacgcctccagggac 246
              ||||| ||||| ||||| ||||||||||||||
Sbjct: 506633 gccacagtcataggccctacgcctccagggac 506664
to top
>gb|AC140934.1| Gallus gallus BAC clone TAM31-90J8 from chromosome ul, complete
             sequence
          Length = 97842

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aaaggcataacaaaatggag 75
             ||||||||||||||||||||
Sbjct: 11594 aaaggcataacaaaatggag 11613
to top
>gb|J05519.1|RATC1H4SY Rat C1-tetrahydrofolate synthase mRNA, complete cds
          Length = 3332

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 211  cattgccacggtcatcggcccaacgcctccagggac 246
            ||||||||||||||| ||||| ||||| || |||||
Sbjct: 1152 cattgccacggtcatgggccccacgccaccggggac 1117


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,197,510
Number of Sequences: 3902068
Number of extensions: 3197510
Number of successful extensions: 53281
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53046
Number of HSP's gapped (non-prelim): 235
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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