ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart40d07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009511.1| Triticum aestivum clone wr1.pk0094.d12:fis, full insert mRNA sequence Length = 746 Score = 396 bits (200), Expect = e-107 Identities = 344/392 (87%) Strand = Plus / Minus Query: 101 atatgtaggtgtatgtgcagatgctataaggcgaagacacctagggaaggagagtgctga 160 |||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||| || Sbjct: 601 atatataggtgtatgtgcagatgctataagacgaaggaacctagggcaggagagtgccga 542 Query: 161 ccgtgtgccacggattgtctcttgaacaactccggcgggcctagctcccccgtcgccgct 220 ||||||| |||| |||| |||| ||| ||||||||||||||| ||||| || |||||||| Sbjct: 541 ccgtgtgtcacgcattgcctctggaataactccggcgggccttgctccgccatcgccgct 482 Query: 221 cgcaccctcttcacaccggcgatgtcaacaccgaacaacttaacgacgtggtcttgttct 280 ||||||||||| || ||||||||||| |||||||||| | |||||||| || |||||||| Sbjct: 481 cgcaccctctttactccggcgatgtcgacaccgaacagcctaacgacgcggacttgttct 422 Query: 281 cctttggcagtctccaccactggcagcggcaacgctgttttgccgccgttcatagtcgtg 340 |||||| ||||||||||||| ||||||||| |||| | ||||||||||| | |||||| Sbjct: 421 cctttgacagtctccaccaccggcagcggcgacgcagatttgccgccgtctacggtcgtg 362 Query: 341 ttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaagacg 400 ||||| ||||||| |||||| ||||||||||||||||||||||| ||| | ||||| ||| Sbjct: 361 ttcttcttgcagtcgatgaagaactgcttctcctgcccgtacgcggagcacgagaacacg 302 Query: 401 atggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagc 460 ||||||||||| || ||||| ||||||| |||||||||| |||||||| || |||||| Sbjct: 301 atggagtcgccggcagcgaggtccttctcacggacgaagcgactccagccctttgtgagc 242 Query: 461 acgtagctctggctactgttccaatacgagta 492 ||||||||||| || ||||||||||||||||| Sbjct: 241 acgtagctctgactgctgttccaatacgagta 210 Score = 61.9 bits (31), Expect = 2e-06 Identities = 69/79 (87%), Gaps = 2/79 (2%) Strand = Plus / Minus Query: 9 tacaactcactttgcaatccgacttg-aaactgagttctatacag-atttatctaatcca 66 ||||||||| |||||||||||||||| ||| ||||||||| | || ||||||||||| || Sbjct: 718 tacaactcattttgcaatccgacttgaaaattgagttctacagagaatttatctaattca 659 Query: 67 ccaacaggatcaagatata 85 ||||||||||| ||||| Sbjct: 658 tgaacaggatcaacatata 640
>ref|NM_184305.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 115 bits (58), Expect = 1e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 339 tgttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaaga 398 ||||||| ||||||| |||||| | | |||| || | |||||||||||| |||||||| Sbjct: 1010 tgttcttcttgcagtcgatgaagagcagcttgtcggggccgtacgccgagcgggagaaga 951 Query: 399 cgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtga 458 | |||| |||||| |||| |||||||||||||| ||||| | |||||| || ||||| | Sbjct: 950 ctatggtgtcgccggcgcggaggcccttctccctcacgaatcggctccaccccttggtca 891 Query: 459 gcacgtagctctggctactgttccaatacgagta 492 |||||||||||||||| |||||||| |||||||| Sbjct: 890 gcacgtagctctggctgctgttccagtacgagta 857
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 115 bits (58), Expect = 1e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 339 tgttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaaga 398 ||||||| ||||||| |||||| | | |||| || | |||||||||||| |||||||| Sbjct: 2202286 tgttcttcttgcagtcgatgaagagcagcttgtcggggccgtacgccgagcgggagaaga 2202227 Query: 399 cgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtga 458 | |||| |||||| |||| |||||||||||||| ||||| | |||||| || ||||| | Sbjct: 2202226 ctatggtgtcgccggcgcggaggcccttctccctcacgaatcggctccaccccttggtca 2202167 Query: 459 gcacgtagctctggctactgttccaatacgagta 492 |||||||||||||||| |||||||| |||||||| Sbjct: 2202166 gcacgtagctctggctgctgttccagtacgagta 2202133 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 422 cccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttc 481 ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 28613357 cccttctccttgacgaagcggctccagcccttggttagcacgtagctctggctgctgttc 28613416 Query: 482 caatacgagta 492 || |||||||| Sbjct: 28613417 cagtacgagta 28613427 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 418 gaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctact 477 |||||||||||||| ||||| | |||||| || |||||||||||||| |||||||| || Sbjct: 2154105 gaggcccttctccctcacgaatcggctccaccccttggtgagcacgtaactctggctgct 2154046 Query: 478 gttccaatacgagta 492 |||||| |||||||| Sbjct: 2154045 gttccagtacgagta 2154031 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 236 ccggcgatgtcaacaccgaacaacttaacgacg 268 |||||||||||||| ||||||| ||| |||||| Sbjct: 2154263 ccggcgatgtcaacgccgaacagcttgacgacg 2154231 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 aggagaagacgatggagtcg 409 |||||||||||||||||||| Sbjct: 38991470 aggagaagacgatggagtcg 38991451
>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0480E02 Length = 141862 Score = 115 bits (58), Expect = 1e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 339 tgttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaaga 398 ||||||| ||||||| |||||| | | |||| || | |||||||||||| |||||||| Sbjct: 123398 tgttcttcttgcagtcgatgaagagcagcttgtcggggccgtacgccgagcgggagaaga 123339 Query: 399 cgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtga 458 | |||| |||||| |||| |||||||||||||| ||||| | |||||| || ||||| | Sbjct: 123338 ctatggtgtcgccggcgcggaggcccttctccctcacgaatcggctccaccccttggtca 123279 Query: 459 gcacgtagctctggctactgttccaatacgagta 492 |||||||||||||||| |||||||| |||||||| Sbjct: 123278 gcacgtagctctggctgctgttccagtacgagta 123245 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 418 gaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctact 477 |||||||||||||| ||||| | |||||| || |||||||||||||| |||||||| || Sbjct: 75217 gaggcccttctccctcacgaatcggctccaccccttggtgagcacgtaactctggctgct 75158 Query: 478 gttccaatacgagta 492 |||||| |||||||| Sbjct: 75157 gttccagtacgagta 75143 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 236 ccggcgatgtcaacaccgaacaacttaacgacg 268 |||||||||||||| ||||||| ||| |||||| Sbjct: 75375 ccggcgatgtcaacgccgaacagcttgacgacg 75343
>dbj|AK065008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E21, full insert sequence Length = 1512 Score = 115 bits (58), Expect = 1e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 339 tgttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaaga 398 ||||||| ||||||| |||||| | | |||| || | |||||||||||| |||||||| Sbjct: 1010 tgttcttcttgcagtcgatgaagagcagcttgtcggggccgtacgccgagcgggagaaga 951 Query: 399 cgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtga 458 | |||| |||||| |||| |||||||||||||| ||||| | |||||| || ||||| | Sbjct: 950 ctatggtgtcgccggcgcggaggcccttctccctcacgaatcggctccaccccttggtca 891 Query: 459 gcacgtagctctggctactgttccaatacgagta 492 |||||||||||||||| |||||||| |||||||| Sbjct: 890 gcacgtagctctggctgctgttccagtacgagta 857
>gb|BT017462.1| Zea mays clone EL01N0407E07.c mRNA sequence Length = 1115 Score = 101 bits (51), Expect = 2e-18 Identities = 69/75 (92%) Strand = Plus / Minus Query: 418 gaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctact 477 ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 642 gaggcccttctccttgacgaagcggctccagcccttggtgagcacgtagctctggctgct 583 Query: 478 gttccaatacgagta 492 |||||| |||||||| Sbjct: 582 gttccagtacgagta 568
>ref|NM_197547.1| Oryza sativa (japonica cultivar-group) putative DNA-binding protein (OSJNBa0040D23.9), mRNA Length = 939 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| |||||||||| ||||||| |||||||| |||||| |||||||| | |||||| Sbjct: 387 gtcgccggcgccgaggcgcttctccttgacgaagcggctccaccctttggtcatcacgta 328 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| |||||||| |||||||| Sbjct: 327 gctctggctgctgttccagtacgagta 301
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| |||||||||| ||||||| |||||||| |||||| |||||||| | |||||| Sbjct: 37687 gtcgccggcgccgaggcgcttctccttgacgaagcggctccaccctttggtcatcacgta 37746 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| |||||||| |||||||| Sbjct: 37747 gctctggctgctgttccagtacgagta 37773
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| |||||||||| ||||||| |||||||| |||||| |||||||| | |||||| Sbjct: 20397539 gtcgccggcgccgaggcgcttctccttgacgaagcggctccaccctttggtcatcacgta 20397598 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| |||||||| |||||||| Sbjct: 20397599 gctctggctgctgttccagtacgagta 20397625
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| |||||||||| ||||||| |||||||| |||||| |||||||| | |||||| Sbjct: 20408811 gtcgccggcgccgaggcgcttctccttgacgaagcggctccaccctttggtcatcacgta 20408870 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| |||||||| |||||||| Sbjct: 20408871 gctctggctgctgttccagtacgagta 20408897
>ref|XM_467942.1| Oryza sativa (japonica cultivar-group), mRNA Length = 802 Score = 91.7 bits (46), Expect = 2e-15 Identities = 127/154 (82%) Strand = Plus / Minus Query: 339 tgttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaaga 398 ||||||| ||||||| |||||| | | |||| || | || ||||||||| |||||||| Sbjct: 558 tgttcttcttgcagtcgatgaagagcagcttgtcggggccatacgccgagccggagaaga 499 Query: 399 cgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtga 458 | |||| |||||| |||| |||||||||||||| ||||| | |||||| || ||||| | Sbjct: 498 ctatggtgtcgccggcgcggaggcccttctccctcacgaatcggctccatcccttggtca 439 Query: 459 gcacgtagctctggctactgttccaatacgagta 492 ||||||| |||||||| |||||||| ||||||| Sbjct: 438 gcacgtaactctggctgctgttccagcacgagta 405
>gb|BT009310.1| Triticum aestivum clone wlm1.pk0022.d1:fis, full insert mRNA sequence Length = 1470 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 419 aggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactg 478 |||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||| ||| Sbjct: 939 aggcccttctccttgacaaagcggctccagcccttggtgagcacgtagctctggctgctg 880 Query: 479 ttccaatacgagta 492 ||||| |||||||| Sbjct: 879 ttccagtacgagta 866
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 2e-15 Identities = 127/154 (82%) Strand = Plus / Minus Query: 339 tgttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaaga 398 ||||||| ||||||| |||||| | | |||| || | || ||||||||| |||||||| Sbjct: 32208298 tgttcttcttgcagtcgatgaagagcagcttgtcggggccatacgccgagccggagaaga 32208239 Query: 399 cgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtga 458 | |||| |||||| |||| |||||||||||||| ||||| | |||||| || ||||| | Sbjct: 32208238 ctatggtgtcgccggcgcggaggcccttctccctcacgaatcggctccatcccttggtca 32208179 Query: 459 gcacgtagctctggctactgttccaatacgagta 492 ||||||| |||||||| |||||||| ||||||| Sbjct: 32208178 gcacgtaactctggctgctgttccagcacgagta 32208145 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 417 cgaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctac 476 |||||| ||||||| |||||||| |||||| || ||||| | ||||||||||||||| | Sbjct: 27952289 cgaggcgcttctccttgacgaagcggctccaccccttggtcatcacgtagctctggctgc 27952348 Query: 477 tgttccaatacgagta 492 ||||||| || ||||| Sbjct: 27952349 tgttccagtaggagta 27952364
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 91.7 bits (46), Expect = 2e-15 Identities = 127/154 (82%) Strand = Plus / Minus Query: 339 tgttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaaga 398 ||||||| ||||||| |||||| | | |||| || | || ||||||||| |||||||| Sbjct: 52311 tgttcttcttgcagtcgatgaagagcagcttgtcggggccatacgccgagccggagaaga 52252 Query: 399 cgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtga 458 | |||| |||||| |||| |||||||||||||| ||||| | |||||| || ||||| | Sbjct: 52251 ctatggtgtcgccggcgcggaggcccttctccctcacgaatcggctccatcccttggtca 52192 Query: 459 gcacgtagctctggctactgttccaatacgagta 492 ||||||| |||||||| |||||||| ||||||| Sbjct: 52191 gcacgtaactctggctgctgttccagcacgagta 52158
>dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0486G03 Length = 146713 Score = 91.7 bits (46), Expect = 2e-15 Identities = 127/154 (82%) Strand = Plus / Minus Query: 339 tgttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaaga 398 ||||||| ||||||| |||||| | | |||| || | || ||||||||| |||||||| Sbjct: 144954 tgttcttcttgcagtcgatgaagagcagcttgtcggggccatacgccgagccggagaaga 144895 Query: 399 cgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtga 458 | |||| |||||| |||| |||||||||||||| ||||| | |||||| || ||||| | Sbjct: 144894 ctatggtgtcgccggcgcggaggcccttctccctcacgaatcggctccatcccttggtca 144835 Query: 459 gcacgtagctctggctactgttccaatacgagta 492 ||||||| |||||||| |||||||| ||||||| Sbjct: 144834 gcacgtaactctggctgctgttccagcacgagta 144801
>dbj|AK066197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055M02, full insert sequence Length = 801 Score = 91.7 bits (46), Expect = 2e-15 Identities = 127/154 (82%) Strand = Plus / Minus Query: 339 tgttctttttgcagttgatgaataactgcttctcctgcccgtacgccgaggaggagaaga 398 ||||||| ||||||| |||||| | | |||| || | || ||||||||| |||||||| Sbjct: 557 tgttcttcttgcagtcgatgaagagcagcttgtcggggccatacgccgagccggagaaga 498 Query: 399 cgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtga 458 | |||| |||||| |||| |||||||||||||| ||||| | |||||| || ||||| | Sbjct: 497 ctatggtgtcgccggcgcggaggcccttctccctcacgaatcggctccatcccttggtca 438 Query: 459 gcacgtagctctggctactgttccaatacgagta 492 ||||||| |||||||| |||||||| ||||||| Sbjct: 437 gcacgtaactctggctgctgttccagcacgagta 404
>ref|NM_192160.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 422 cccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttc 481 ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 884 cccttctccttgacgaagcggctccagcccttggttagcacgtagctctggctgctgttc 825 Query: 482 caatacgagta 492 || |||||||| Sbjct: 824 cagtacgagta 814
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 422 cccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttc 481 ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 139796 cccttctccttgacgaagcggctccagcccttggttagcacgtagctctggctgctgttc 139855 Query: 482 caatacgagta 492 || |||||||| Sbjct: 139856 cagtacgagta 139866
>ref|XM_475850.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1185 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 393 agaagacgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctt 452 ||||| ||| || |||||| ||| ||| ||||||||| |||||||| |||||| || | Sbjct: 889 agaagccgacggcgtcgccggcgtggagccccttctccttgacgaagcggctccacccct 830 Query: 453 tggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||||||||||||||||| |||||||| || ||||| Sbjct: 829 tggtgagcacgtagctctggctgctgttccagtaggagta 790
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 393 agaagacgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctt 452 ||||| ||| || |||||| ||| ||| ||||||||| |||||||| |||||| || | Sbjct: 14945 agaagccgacggcgtcgccggcgtggagccccttctccttgacgaagcggctccacccct 14886 Query: 453 tggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||||||||||||||||| |||||||| || ||||| Sbjct: 14885 tggtgagcacgtagctctggctgctgttccagtaggagta 14846
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 393 agaagacgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctt 452 ||||| ||| || |||||| ||| ||| ||||||||| |||||||| |||||| || | Sbjct: 90130 agaagccgacggcgtcgccggcgtggagccccttctccttgacgaagcggctccacccct 90071 Query: 453 tggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||||||||||||||||| |||||||| || ||||| Sbjct: 90070 tggtgagcacgtagctctggctgctgttccagtaggagta 90031
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 393 agaagacgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctt 452 ||||| ||| || |||||| ||| ||| ||||||||| |||||||| |||||| || | Sbjct: 114633 agaagccgacggcgtcgccggcgtggagccccttctccttgacgaagcggctccacccct 114574 Query: 453 tggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||||||||||||||||| |||||||| || ||||| Sbjct: 114573 tggtgagcacgtagctctggctgctgttccagtaggagta 114534
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 393 agaagacgatggagtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctt 452 ||||| ||| || |||||| ||| ||| ||||||||| |||||||| |||||| || | Sbjct: 27083549 agaagccgacggcgtcgccggcgtggagccccttctccttgacgaagcggctccacccct 27083490 Query: 453 tggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||||||||||||||||| |||||||| || ||||| Sbjct: 27083489 tggtgagcacgtagctctggctgctgttccagtaggagta 27083450
>ref|NM_184298.1| Oryza sativa (japonica cultivar-group), mRNA Length = 954 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 418 gaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctact 477 |||||||||||||| ||||| | |||||| || |||||||||||||| |||||||| || Sbjct: 780 gaggcccttctccctcacgaatcggctccaccccttggtgagcacgtaactctggctgct 721 Query: 478 gttccaatacgagta 492 |||||| |||||||| Sbjct: 720 gttccagtacgagta 706 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 236 ccggcgatgtcaacaccgaacaacttaacgacg 268 |||||||||||||| ||||||| ||| |||||| Sbjct: 938 ccggcgatgtcaacgccgaacagcttgacgacg 906
>gb|DQ147914.1| Glycine max RAV-like DNA-binding protein mRNA, complete cds Length = 1380 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 442 gctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 939 gctccatcctttggtaagcacgtagctctggctactgttccaataagagta 889
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||||||| |||| ||| ||||||||| |||||||||||||| Sbjct: 2835692 gtcgccggcgtcgaggcgcttctccttgacgtagcggctccagcccttggtgagcacgta 2835751 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| ||| |||| || ||||| Sbjct: 2835752 gctctggctgctggtccagtaggagta 2835778
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||||||| |||| ||| ||||||||| |||||||||||||| Sbjct: 2835636 gtcgccggcgtcgaggcgcttctccttgacgtagcggctccagcccttggtgagcacgta 2835695 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| ||| |||| || ||||| Sbjct: 2835696 gctctggctgctggtccagtaggagta 2835722
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||||||| |||| ||| ||||||||| |||||||||||||| Sbjct: 34755 gtcgccggcgtcgaggcgcttctccttgacgtagcggctccagcccttggtgagcacgta 34696 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| ||| |||| || ||||| Sbjct: 34695 gctctggctgctggtccagtaggagta 34669
>ref|NM_116380.2| Arabidopsis thaliana transcription factor AT4G01500 mRNA, complete cds Length = 1135 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 424 cttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttcca 483 ||||||| |||||| | |||||| |||||||| | ||||||||| |||||||||||||| Sbjct: 312 cttctccttgacgaaacggctccatcctttggtcatcacgtagctttggctactgttcca 253 Query: 484 atacgagta 492 ||||||||| Sbjct: 252 atacgagta 244
>gb|AC134048.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076K20, complete sequence Length = 127338 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||||||| |||| ||| ||||||||| |||||||||||||| Sbjct: 110870 gtcgccggcgtcgaggcgcttctccttgacgtagcggctccagcccttggtgagcacgta 110811 Query: 466 gctctggct 474 ||||||||| Sbjct: 110810 gctctggct 110802
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||||||| |||| ||| ||||||||| |||||||||||||| Sbjct: 6476 gtcgccggcgtcgaggcgcttctccttgacgtagcggctccagcccttggtgagcacgta 6417 Query: 466 gctctggct 474 ||||||||| Sbjct: 6416 gctctggct 6408
>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4 Length = 198697 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 424 cttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttcca 483 ||||||| |||||| | |||||| |||||||| | ||||||||| |||||||||||||| Sbjct: 62682 cttctccttgacgaaacggctccatcctttggtcatcacgtagctttggctactgttcca 62623 Query: 484 atacgagta 492 ||||||||| Sbjct: 62622 atacgagta 62614
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||||||| |||| ||| ||||||||| |||||||||||||| Sbjct: 2615928 gtcgccggcgtcgaggcgcttctccttgacgtagcggctccagcccttggtgagcacgta 2615987 Query: 466 gctctggct 474 ||||||||| Sbjct: 2615988 gctctggct 2615996
>gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4 Length = 72872 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 424 cttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttcca 483 ||||||| |||||| | |||||| |||||||| | ||||||||| |||||||||||||| Sbjct: 40895 cttctccttgacgaaacggctccatcctttggtcatcacgtagctttggctactgttcca 40954 Query: 484 atacgagta 492 ||||||||| Sbjct: 40955 atacgagta 40963
>dbj|AK072663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P15, full insert sequence Length = 1279 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||||||| |||| ||| ||||||||| |||||||||||||| Sbjct: 335 gtcgccggcgtcgaggcgcttctccttgacgtagcggctccagcccttggtgagcacgta 276 Query: 466 gctctggct 474 ||||||||| Sbjct: 275 gctctggct 267
>dbj|AK070487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049E11, full insert sequence Length = 1642 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||||||| |||| ||| ||||||||| |||||||||||||| Sbjct: 447 gtcgccggcgtcgaggcgcttctccttgacgtagcggctccagcccttggtgagcacgta 388 Query: 466 gctctggct 474 ||||||||| Sbjct: 387 gctctggct 379
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||||||| |||| ||| ||||||||| |||||||||||||| Sbjct: 2624959 gtcgccggcgtcgaggcgcttctccttgacgtagcggctccagcccttggtgagcacgta 2625018 Query: 466 gctctggct 474 ||||||||| Sbjct: 2625019 gctctggct 2625027
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 413 gcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctgg 472 |||| |||||||||||||| ||||| | |||||| || ||||| ||||||||||||||| Sbjct: 21733693 gcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctgg 21733634 Query: 473 ctactgttcc 482 || ||||||| Sbjct: 21733633 ctgctgttcc 21733624 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||| || |||||| ||| |||||| || ||||||| ||||| Sbjct: 483944 gtcgccggcggcgaggcgcttgtcgcggacgtagcggctccatcccttggtgatgacgta 484003 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| ||| |||| || ||||| Sbjct: 484004 gctctggctgctgctccagtaggagta 484030
>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062E01 Length = 161804 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 413 gcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctgg 472 |||| |||||||||||||| ||||| | |||||| || ||||| ||||||||||||||| Sbjct: 132624 gcgcagaggcccttctccctcacgaatcggctccatcccttggtcagcacgtagctctgg 132565 Query: 473 ctactgttcc 482 || ||||||| Sbjct: 132564 ctgctgttcc 132555
>ref|NM_180228.2| Arabidopsis thaliana transcription factor AT3G11580 transcript variant AT3G11580.2 mRNA, complete cds Length = 778 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||| |||||||| | ||||||||| ||||||||||||||||| ||||| Sbjct: 375 ctgctccatcctttggtcaacacgtagctttggctactgttccaataagagta 323
>ref|NM_111991.3| Arabidopsis thaliana transcription factor AT3G11580 transcript variant AT3G11580.1 mRNA, complete cds Length = 968 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||| |||||||| | ||||||||| ||||||||||||||||| ||||| Sbjct: 375 ctgctccatcctttggtcaacacgtagctttggctactgttccaataagagta 323
>emb|BX825514.1|CNS0A67V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 966 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||| |||||||| | ||||||||| ||||||||||||||||| ||||| Sbjct: 368 ctgctccatcctttggtcaacacgtagctttggctactgttccaataagagta 316
>gb|AC008153.5|AC008153 Arabidopsis thaliana chromosome 3 BAC F24K9 genomic sequence, complete sequence Length = 117296 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||| |||||||| | ||||||||| ||||||||||||||||| ||||| Sbjct: 93478 ctgctccatcctttggtcaacacgtagctttggctactgttccaataagagta 93530
>dbj|AK175281.1| Arabidopsis thaliana mRNA for putative DNA binding protein, complete cds, clone: RAFL21-71-N13 Length = 1104 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||| |||||||| | ||||||||| ||||||||||||||||| ||||| Sbjct: 378 ctgctccatcctttggtcaacacgtagctttggctactgttccaataagagta 326
>emb|AJ441076.1|ATH441076 Arabidopsis thaliana mRNA for putative auxin response factor 32 (arf32 gene) Length = 804 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||||| |||||||| | ||||||||| ||||||||||||||||| ||||| Sbjct: 329 ctgctccatcctttggtcaacacgtagctttggctactgttccaataagagta 277
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 417 cgaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctac 476 |||||| ||||||| |||||||| |||||| || ||||| | ||||||||||||||| | Sbjct: 79741 cgaggcgcttctccttgacgaagcggctccaccccttggtcatcacgtagctctggctgc 79800 Query: 477 tgttccaatacgagta 492 ||||||| || ||||| Sbjct: 79801 tgttccagtaggagta 79816
>dbj|AK109908.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-G07, full insert sequence Length = 1859 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 417 cgaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctac 476 |||||| ||||||| |||||||| |||||| || ||||| | ||||||||||||||| | Sbjct: 894 cgaggcgcttctccttgacgaagcggctccaccccttggtcatcacgtagctctggctgc 835 Query: 477 tgttccaatacgagta 492 ||||||| || ||||| Sbjct: 834 tgttccagtaggagta 819
>ref|NM_129167.2| Arabidopsis thaliana transcription factor AT2G36080 transcript variant AT2G36080.2 mRNA, complete cds Length = 1025 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||||||||||||||| | || || ||||||||||||||||| |||||||| Sbjct: 496 ctgctccagcctttggtcaagacataactctggctactgttccagtacgagta 444
>ref|NM_179929.1| Arabidopsis thaliana transcription factor AT2G36080 transcript variant AT2G36080.1 mRNA, complete cds Length = 1149 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||||||||||||||| | || || ||||||||||||||||| |||||||| Sbjct: 496 ctgctccagcctttggtcaagacataactctggctactgttccagtacgagta 444
>ref|NM_187570.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 424 cttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttcca 483 ||||||| |||||||| |||||| || ||||| | ||||||||||||||| |||||||| Sbjct: 336 cttctccttgacgaagcggctccaccccttggtcatcacgtagctctggctgctgttcca 277 Query: 484 atacgagta 492 || ||||| Sbjct: 276 gtaggagta 268
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 424 cttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttcca 483 ||||||| |||||||| |||||| || ||||| | ||||||||||||||| |||||||| Sbjct: 1133401 cttctccttgacgaagcggctccaccccttggtcatcacgtagctctggctgctgttcca 1133342 Query: 484 atacgagta 492 || ||||| Sbjct: 1133341 gtaggagta 1133333
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 424 cttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttcca 483 ||||||| |||||||| |||||| || ||||| | ||||||||||||||| |||||||| Sbjct: 37105 cttctccttgacgaagcggctccaccccttggtcatcacgtagctctggctgctgttcca 37046 Query: 484 atacgagta 492 || ||||| Sbjct: 37045 gtaggagta 37037
>gb|AC007135.8| Arabidopsis thaliana chromosome 2 clone F9C22 map g6825, complete sequence Length = 31733 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||||||||||||||| | || || ||||||||||||||||| |||||||| Sbjct: 1474 ctgctccagcctttggtcaagacataactctggctactgttccagtacgagta 1526
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence Length = 120938 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||||||||||||||| | || || ||||||||||||||||| |||||||| Sbjct: 5948 ctgctccagcctttggtcaagacataactctggctactgttccagtacgagta 5896
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 424 cttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttcca 483 ||||||| |||||||| |||||| || ||||| | ||||||||||||||| |||||||| Sbjct: 1133399 cttctccttgacgaagcggctccaccccttggtcatcacgtagctctggctgctgttcca 1133340 Query: 484 atacgagta 492 || ||||| Sbjct: 1133339 gtaggagta 1133331
>dbj|AK117587.1| Arabidopsis thaliana At2g36080 mRNA for putative RAV2-like DNA binding protein, complete cds, clone: RAFL17-23-G02 Length = 994 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||||||||||||||| | || || ||||||||||||||||| |||||||| Sbjct: 355 ctgctccagcctttggtcaagacataactctggctactgttccagtacgagta 303
>emb|AJ441075.1|ATH441075 Arabidopsis thaliana mRNA for putative auxin response factor 31 (arf31 gene) Length = 477 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 440 ctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||||||||||||||| | || || ||||||||||||||||| |||||||| Sbjct: 287 ctgctccagcctttggtcaagacataactctggctactgttccagtacgagta 235
>dbj|AK106367.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B12, full insert sequence Length = 1780 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 424 cttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctactgttcca 483 ||||||| |||||||| |||||| || ||||| | ||||||||||||||| |||||||| Sbjct: 799 cttctccttgacgaagcggctccaccccttggtcatcacgtagctctggctgctgttcca 740 Query: 484 atacgagta 492 || ||||| Sbjct: 739 gtaggagta 731
>ref|NM_099985.2| Arabidopsis thaliana transcription factor AT1G01030 mRNA, complete cds Length = 1802 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 433 gacgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||| | |||||| |||||||| | ||||||||||||||| ||||||||||||||| Sbjct: 894 gacgaaacggctccatcctttggtcataacgtagctctggctagagttccaatacgagta 835
>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01, complete sequence Length = 186325 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 417 cgaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctac 476 |||||| ||||||| |||||||| |||||| || ||||| | |||||||||||||| | Sbjct: 13627 cgaggcgcttctccttgacgaagcggctccaacccttggtcatgacgtagctctggctgc 13686 Query: 477 tgttccaatacgagta 492 ||||||| || ||||| Sbjct: 13687 tgttccagtaggagta 13702
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 417 cgaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctac 476 |||||| ||||||| |||||||| |||||| || ||||| | |||||||||||||| | Sbjct: 143657 cgaggcgcttctccttgacgaagcggctccaacccttggtcatgacgtagctctggctgc 143716 Query: 477 tgttccaatacgagta 492 ||||||| || ||||| Sbjct: 143717 tgttccagtaggagta 143732
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 417 cgaggcccttctcccggacgaagctgctccagcctttggtgagcacgtagctctggctac 476 |||||| ||||||| |||||||| |||||| || ||||| | |||||||||||||| | Sbjct: 29340611 cgaggcgcttctccttgacgaagcggctccaacccttggtcatgacgtagctctggctgc 29340670 Query: 477 tgttccaatacgagta 492 ||||||| || ||||| Sbjct: 29340671 tgttccagtaggagta 29340686
>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I, complete sequence Length = 86436 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 433 gacgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||| | |||||| |||||||| | ||||||||||||||| ||||||||||||||| Sbjct: 12259 gacgaaacggctccatcctttggtcataacgtagctctggctagagttccaatacgagta 12318
>gb|AF196566.1|AF196566 Arabidopsis thaliana chromosome I, partial sequence Length = 25992 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 433 gacgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||| | |||||| |||||||| | ||||||||||||||| ||||||||||||||| Sbjct: 19187 gacgaaacggctccatcctttggtcataacgtagctctggctagagttccaatacgagta 19128
>ref|XM_550466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||| || |||||| ||| |||||| || ||||||| ||||| Sbjct: 192 gtcgccggcggcgaggcgcttgtcgcggacgtagcggctccatcccttggtgatgacgta 133 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| ||| |||| || ||||| Sbjct: 132 gctctggctgctgctccagtaggagta 106
>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0514G12 Length = 138929 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||| || |||||| ||| |||||| || ||||||| ||||| Sbjct: 29452 gtcgccggcggcgaggcgcttgtcgcggacgtagcggctccatcccttggtgatgacgta 29511 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| ||| |||| || ||||| Sbjct: 29512 gctctggctgctgctccagtaggagta 29538
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||| || |||||| ||| |||||| || ||||||| ||||| Sbjct: 193897 gtcgccggcggcgaggcgcttgtcgcggacgtagcggctccatcccttggtgatgacgta 193956 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| ||| |||| || ||||| Sbjct: 193957 gctctggctgctgctccagtaggagta 193983
>dbj|AK062921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-H07, full insert sequence Length = 789 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 406 gtcgcctgcgccgaggcccttctcccggacgaagctgctccagcctttggtgagcacgta 465 |||||| ||| |||||| ||| || |||||| ||| |||||| || ||||||| ||||| Sbjct: 192 gtcgccggcggcgaggcgcttgtcgcggacgtagcggctccatcccttggtgatgacgta 133 Query: 466 gctctggctactgttccaatacgagta 492 ||||||||| ||| |||| || ||||| Sbjct: 132 gctctggctgctgctccagtaggagta 106
>gb|AF542555.1| Marchantia polymorpha PAC pMM2D3 RS/SP6 region hypothetical alliin lyase-like protein (M2D3.1), hypothetical protein (M2D3.2), M2D3.3 protein (M2D3.3), and hypothetical protein (M2D3.4) genes, complete cds Length = 39397 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 442 gctccagcctttggtgagcacgtagctctg 471 ||||||||||||||||| |||||||||||| Sbjct: 17177 gctccagcctttggtgaacacgtagctctg 17206 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 442 gctccagcctttggtgagcacgtagctctg 471 |||||||| |||||||| |||||||||||| Sbjct: 17558 gctccagcttttggtgaacacgtagctctg 17587
>ref|XM_480190.1| Oryza sativa (japonica cultivar-group), mRNA Length = 864 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 431 cggacgaagctgctccagcctttggtgagcacgtagctctggct 474 |||||||||| |||||| || ||||| | ||||||||||||||| Sbjct: 419 cggacgaagcggctccaccccttggtcatcacgtagctctggct 376
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 431 cggacgaagctgctccagcctttggtgagcacgtagctctggct 474 |||||||||| |||||| || ||||| | ||||||||||||||| Sbjct: 3371543 cggacgaagcggctccaccccttggtcatcacgtagctctggct 3371500
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 431 cggacgaagctgctccagcctttggtgagcacgtagctctggct 474 |||||||||| |||||| || ||||| | ||||||||||||||| Sbjct: 4962 cggacgaagcggctccaccccttggtcatcacgtagctctggct 4919
>dbj|AP006732.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918a, complete sequence Length = 48600 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 433 gacgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||| | |||||| |||||||| | ||| ||||||||||| |||||||| || ||||| Sbjct: 12794 gacgaaacggctccatcctttggtcatcacatagctctggctgctgttccagtaagagta 12735
>ref|NM_101197.3| Arabidopsis thaliana RAV1; DNA binding / transcription factor AT1G13260 (RAV1) mRNA, complete cds Length = 1575 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 434 acgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||| |||||||| ||||| || | || || ||||| |||||||||||||||||||| Sbjct: 1000 acgaacctgctccaacctttagtcaaaacataactctgactactgttccaatacgagta 942
>gb|AY091291.1| Arabidopsis thaliana putative DNA-binding protein RAV1 (At1g13260) mRNA, complete cds Length = 1066 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 434 acgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||| |||||||| ||||| || | || || ||||| |||||||||||||||||||| Sbjct: 782 acgaacctgctccaacctttagtcaaaacataactctgactactgttccaatacgagta 724
>gb|AY063855.1| Arabidopsis thaliana putative DNA-binding protein RAV1 (At1g13260) mRNA, complete cds Length = 1312 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 434 acgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||| |||||||| ||||| || | || || ||||| |||||||||||||||||||| Sbjct: 865 acgaacctgctccaacctttagtcaaaacataactctgactactgttccaatacgagta 807
>emb|BX816249.1|CNS0ABP0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 434 acgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||| |||||||| ||||| || | || || ||||| |||||||||||||||||||| Sbjct: 840 acgaacctgctccaacctttagtcaaaacataactctgactactgttccaatacgagta 782
>emb|BX816625.1|CNS0ABRD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1309 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 434 acgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||| |||||||| ||||| || | || || ||||| |||||||||||||||||||| Sbjct: 838 acgaacctgctccaacctttagtcaaaacataactctgactactgttccaatacgagta 780
>emb|BX815799.1|CNS0ABBS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1397 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 434 acgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||| |||||||| ||||| || | || || ||||| |||||||||||||||||||| Sbjct: 823 acgaacctgctccaacctttagtcaaaacataactctgactactgttccaatacgagta 765
>emb|BX814729.1|CNS0AAT2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1808 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 442 gctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 |||||| |||||||| | |||||| |||||||| ||||||||||||||| Sbjct: 887 gctccatcctttggtcataacgtagttctggctagagttccaatacgagta 837
>emb|BX817019.1|CNS0AAHR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZA05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1275 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 434 acgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||| |||||||| ||||| || | || || ||||| |||||||||||||||||||| Sbjct: 840 acgaacctgctccaacctttagtcaaaacataactctgactactgttccaatacgagta 782
>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete sequence Length = 103157 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 434 acgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||| |||||||| ||||| || | || || ||||| |||||||||||||||||||| Sbjct: 21277 acgaacctgctccaacctttagtcaaaacataactctgactactgttccaatacgagta 21219
>dbj|AB013886.1| Arabidopsis thaliana mRNA for RAV1, complete cds Length = 1276 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 434 acgaagctgctccagcctttggtgagcacgtagctctggctactgttccaatacgagta 492 ||||| |||||||| ||||| || | || || ||||| |||||||||||||||||||| Sbjct: 840 acgaacctgctccaacctttagtcaaaacataactctgactactgttccaatacgagta 782
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete sequence Length = 144422 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 ataagggaggagaagaatatat 104 |||||||||||||||||||||| Sbjct: 56942 ataagggaggagaagaatatat 56921
>emb|BX841829.1|CNS09Y1T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZA09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1387 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 467 ctctggctactgttccaatacgagta 492 ||||| |||||||||||||||||||| Sbjct: 968 ctctgactactgttccaatacgagta 943
>gb|DQ073090.1| Medicago sativa clone Agat010 SSR marker sequence Length = 604 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 442 gctccagcctttggtgagcacgtagctctggctactgttccaata 486 |||||| ||||| || | ||| || |||||||||||||||||||| Sbjct: 480 gctccacccttttgtcatcacataactctggctactgttccaata 524
>emb|AL928974.12| Mouse DNA sequence from clone RP23-56C2 on chromosome 2, complete sequence Length = 195442 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 atatatgtaggtgtatgtgca 119 ||||||||||||||||||||| Sbjct: 182600 atatatgtaggtgtatgtgca 182620
>emb|AL929254.12| Mouse DNA sequence from clone RP23-456I1 on chromosome 2, complete sequence Length = 222104 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 atatatgtaggtgtatgtgca 119 ||||||||||||||||||||| Sbjct: 31770 atatatgtaggtgtatgtgca 31790
>gb|AC115895.9| Mus musculus chromosome 5, clone RP24-443E20, complete sequence Length = 174073 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 atatatgtaggtgtatgtgca 119 ||||||||||||||||||||| Sbjct: 77788 atatatgtaggtgtatgtgca 77808
>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence Length = 182190 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gtaggtgtatgtgcagatgc 124 |||||||||||||||||||| Sbjct: 24349 gtaggtgtatgtgcagatgc 24330
>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence Length = 192540 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ctccaccactggcagcggca 311 |||||||||||||||||||| Sbjct: 175987 ctccaccactggcagcggca 176006
>gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, complete sequence Length = 244656 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atgtaggtgtatgtgcagat 122 |||||||||||||||||||| Sbjct: 224570 atgtaggtgtatgtgcagat 224589
>gb|AC125081.3| Mus musculus BAC clone RP24-89D17 from chromosome 3, complete sequence Length = 220895 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 tatatgtaggtgtatgtgcagatg 123 ||||||||| |||||||||||||| Sbjct: 155157 tatatgtagatgtatgtgcagatg 155134
>gb|AC121820.2| Mus musculus BAC clone RP23-460N4 from 6, complete sequence Length = 178653 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 agaatatatgtaggtgtatgtgca 119 |||||||||||| ||||||||||| Sbjct: 147292 agaatatatgtatgtgtatgtgca 147269
>gb|AC108434.12| Mus musculus chromosome 18, clone RP23-198I24, complete sequence Length = 197080 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttctatacagatttatctaa 62 |||||||||||||||||||| Sbjct: 120650 ttctatacagatttatctaa 120669
>gb|AC144636.4| Artibeus jamaicensis clone 1A13, complete sequence Length = 114691 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 gtgttctttttgcagttgat 357 |||||||||||||||||||| Sbjct: 48342 gtgttctttttgcagttgat 48323
>gb|AC166254.5| Mus musculus 6 BAC RP24-409O18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 201023 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 agaatatatgtaggtgtatgtgca 119 |||||||||||| ||||||||||| Sbjct: 68774 agaatatatgtatgtgtatgtgca 68751
>gb|AC157766.4| Mus musculus chromosome 1, clone RP24-318F24, complete sequence Length = 145303 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 atgtaggtgtatgtgcagat 122 |||||||||||||||||||| Sbjct: 141301 atgtaggtgtatgtgcagat 141282
>emb|AL512589.4| Mouse DNA sequence from clone RP23-431C3 on chromosome 2, complete sequence Length = 170352 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 agctctggctactgttccaa 484 |||||||||||||||||||| Sbjct: 33216 agctctggctactgttccaa 33197
>gb|AC010024.5| Drosophila melanogaster 3L BAC RP98-26E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181004 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 gaagaatatatgtaggtgtatgtg 117 ||||||||| |||||||||||||| Sbjct: 63888 gaagaatatgtgtaggtgtatgtg 63865
>ref|NM_167521.2| Drosophila melanogaster hangover CG32575-RA, transcript variant A (hang), mRNA Length = 6907 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ctccaccactggcagcggca 311 |||||||||||||||||||| Sbjct: 2473 ctccaccactggcagcggca 2492
>ref|NM_167520.2| Drosophila melanogaster hangover CG32575-RB, transcript variant B (hang), mRNA Length = 6860 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ctccaccactggcagcggca 311 |||||||||||||||||||| Sbjct: 2473 ctccaccactggcagcggca 2492
>gb|AC069407.2| Drosophila melanogaster 3L BAC RP98-30I5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183714 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 gaagaatatatgtaggtgtatgtg 117 ||||||||| |||||||||||||| Sbjct: 177026 gaagaatatgtgtaggtgtatgtg 177049
>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold Length = 584809 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 gtgttctttttgcagttgat 357 |||||||||||||||||||| Sbjct: 372901 gtgttctttttgcagttgat 372882
>dbj|AK038220.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130087H02 product:unclassifiable, full insert sequence Length = 2313 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 taagggaggagaagaatatatgta 107 ||||||| |||||||||||||||| Sbjct: 1715 taagggatgagaagaatatatgta 1738
>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone BACR47D09, complete sequence Length = 166935 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ctccaccactggcagcggca 311 |||||||||||||||||||| Sbjct: 80033 ctccaccactggcagcggca 80052
>gb|AC012071.9| Homo sapiens BAC clone RP11-328L5 from 2, complete sequence Length = 195265 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aatatatgtaggtgtatgtg 117 |||||||||||||||||||| Sbjct: 74362 aatatatgtaggtgtatgtg 74381
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 aggagaagacgatggagtcg 409 |||||||||||||||||||| Sbjct: 65103 aggagaagacgatggagtcg 65084
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 aggagaagacgatggagtcg 409 |||||||||||||||||||| Sbjct: 9450 aggagaagacgatggagtcg 9431
>ref|NM_208119.1| Eremothecium gossypii ABL181Wp (ABL181W), mRNA Length = 930 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gtctccaccactggcagcgg 309 |||||||||||||||||||| Sbjct: 98 gtctccaccactggcagcgg 79
>gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23 of 83 of the complete sequence Length = 255329 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 gaagaatatatgtaggtgtatgtg 117 ||||||||| |||||||||||||| Sbjct: 153513 gaagaatatgtgtaggtgtatgtg 153536
>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete sequence Length = 304712 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ctccaccactggcagcggca 311 |||||||||||||||||||| Sbjct: 99315 ctccaccactggcagcggca 99334
>emb|AL161670.4|CNS01RHD Human chromosome 14 DNA sequence BAC R-804M7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163923 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cttgaaactgagttctatac 50 |||||||||||||||||||| Sbjct: 88688 cttgaaactgagttctatac 88707
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cggcgatgtcaacaccgaac 256 |||||||||||||||||||| Sbjct: 1997345 cggcgatgtcaacaccgaac 1997326
>gb|AC173346.1| Mus musculus BAC clone RP23-42N8 from chromosome 9, complete sequence Length = 219266 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gtaggtgtatgtgcagatgc 124 |||||||||||||||||||| Sbjct: 194071 gtaggtgtatgtgcagatgc 194052
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gtctccaccactggcagcgg 309 |||||||||||||||||||| Sbjct: 65927 gtctccaccactggcagcgg 65908 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,023,945 Number of Sequences: 3902068 Number of extensions: 4023945 Number of successful extensions: 72582 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71845 Number of HSP's gapped (non-prelim): 736 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
