ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OLFM_RANCA (Q07081) Olfactomedin precursor (Olfactory mucus prot... 30 3.0
2BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 prec... 30 3.9

>OLFM_RANCA (Q07081) Olfactomedin precursor (Olfactory mucus protein)|
          Length = 464

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 227 YICLCTVVNLHFCLFLLASNVAGETRGNLDCLC 129
           YICL T+V +H     +A N  G   G   C+C
Sbjct: 2   YICLLTLVLIHAAAAFVAQNATGILAGKDHCVC 34



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>BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 precursor|
          Length = 1572

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -1

Query: 212  TVVNLHFCLFLLASNV---AGETRGNLDCLCCKLGEFNHCCHFAKSQFCFV 69
            +++ L+FCL +LASN+    G++R     +C     F H   F  S FC+V
Sbjct: 954  SIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLH--FFFLSSFCWV 1002


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,535,439
Number of Sequences: 219361
Number of extensions: 878589
Number of successful extensions: 1954
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1952
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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