Clone Name | rbart40d06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 242 bits (122), Expect = 9e-61 Identities = 265/310 (85%), Gaps = 12/310 (3%) Strand = Plus / Plus Query: 213 acatagacaaatataagttaaatcctgcatctgtatagtatgatcaacatcacaaggagg 272 ||||||| ||||||| | ||||||||||||||||||||||||| | |||||| | ||||| Sbjct: 35864926 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 35864984 Query: 273 agaaactgaacaggtagtgctgcatttcctgtcatcatgtatcccctc---gtatca--- 326 ||||| ||||||||| |||| |||||| |||||||||||| ||| | |||| Sbjct: 35864985 agaaattgaacaggtcaggctgtatttcc---catcatgtatcctctcactggatcacaa 35865041 Query: 327 --ctctagagctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcat 384 ||||||||||| || |||||||| ||||| |||| ||| ||||| |||||||| || | Sbjct: 35865042 cactctagagctcaaactcctcctcccggagtgccagctctgcagcttcctcctcatcct 35865101 Query: 385 catccagagcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgt 444 |||| ||||| || || ||||||||||| || ||| ||||||||||||||||||||| || Sbjct: 35865102 catcaagagcgaaatattggttcctctctgctggcctgaacatgtagaacatgaacaggt 35865161 Query: 445 agaatgccatggtggccacctcctctgccgcaacactcacccatctgtacttgtagttgg 504 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 35865162 agaatgccacagtggccacctcctctgcggcaacactcacccatctgtacttgtagttgg 35865221 Query: 505 tgattgtctt 514 |||||||||| Sbjct: 35865222 tgattgtctt 35865231 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 421 tgaacatgtagaacatgaacatgtagaatgc 451 |||||||| |||||||||||| ||||||||| Sbjct: 35862245 tgaacatgcagaacatgaacaggtagaatgc 35862275 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Plus Query: 72 gaagcaaaactgagacttggcaaaatgacagcagtgattgaattcgcctagtttgcaaca 131 |||||||| ||||| ||||||||||| || || ||| | ||| | |||| ||||||||| Sbjct: 35864784 gaagcaaacctgagtattggcaaaatggcaacattgaataaatgcccctaatttgcaaca 35864843 Query: 132 caagca 137 |||||| Sbjct: 35864844 caagca 35864849 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 agaaataaacagaagtgaaga 201 ||||||||||||||||||||| Sbjct: 7977120 agaaataaacagaagtgaaga 7977100
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 242 bits (122), Expect = 9e-61 Identities = 265/310 (85%), Gaps = 12/310 (3%) Strand = Plus / Plus Query: 213 acatagacaaatataagttaaatcctgcatctgtatagtatgatcaacatcacaaggagg 272 ||||||| ||||||| | ||||||||||||||||||||||||| | |||||| | ||||| Sbjct: 129384 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 129442 Query: 273 agaaactgaacaggtagtgctgcatttcctgtcatcatgtatcccctc---gtatca--- 326 ||||| ||||||||| |||| |||||| |||||||||||| ||| | |||| Sbjct: 129443 agaaattgaacaggtcaggctgtatttcc---catcatgtatcctctcactggatcacaa 129499 Query: 327 --ctctagagctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcat 384 ||||||||||| || |||||||| ||||| |||| ||| ||||| |||||||| || | Sbjct: 129500 cactctagagctcaaactcctcctcccggagtgccagctctgcagcttcctcctcatcct 129559 Query: 385 catccagagcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgt 444 |||| ||||| || || ||||||||||| || ||| ||||||||||||||||||||| || Sbjct: 129560 catcaagagcgaaatattggttcctctctgctggcctgaacatgtagaacatgaacaggt 129619 Query: 445 agaatgccatggtggccacctcctctgccgcaacactcacccatctgtacttgtagttgg 504 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 129620 agaatgccacagtggccacctcctctgcggcaacactcacccatctgtacttgtagttgg 129679 Query: 505 tgattgtctt 514 |||||||||| Sbjct: 129680 tgattgtctt 129689 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 421 tgaacatgtagaacatgaacatgtagaatgc 451 |||||||| |||||||||||| ||||||||| Sbjct: 126703 tgaacatgcagaacatgaacaggtagaatgc 126733 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Plus Query: 72 gaagcaaaactgagacttggcaaaatgacagcagtgattgaattcgcctagtttgcaaca 131 |||||||| ||||| ||||||||||| || || ||| | ||| | |||| ||||||||| Sbjct: 129242 gaagcaaacctgagtattggcaaaatggcaacattgaataaatgcccctaatttgcaaca 129301 Query: 132 caagca 137 |||||| Sbjct: 129302 caagca 129307
>dbj|AK119783.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F04, full insert sequence Length = 1678 Score = 242 bits (122), Expect = 9e-61 Identities = 265/310 (85%), Gaps = 12/310 (3%) Strand = Plus / Minus Query: 213 acatagacaaatataagttaaatcctgcatctgtatagtatgatcaacatcacaaggagg 272 ||||||| ||||||| | ||||||||||||||||||||||||| | |||||| | ||||| Sbjct: 1531 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1473 Query: 273 agaaactgaacaggtagtgctgcatttcctgtcatcatgtatcccctc---gtatca--- 326 ||||| ||||||||| |||| |||||| |||||||||||| ||| | |||| Sbjct: 1472 agaaattgaacaggtcaggctgtatttcc---catcatgtatcctctcactggatcacaa 1416 Query: 327 --ctctagagctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcat 384 ||||||||||| || |||||||| ||||| |||| ||| ||||| |||||||| || | Sbjct: 1415 cactctagagctcaaactcctcctcccggagtgccagctctgcagcttcctcctcatcct 1356 Query: 385 catccagagcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgt 444 |||| ||||| || || ||||||||||| || ||| ||||||||||||||||||||| || Sbjct: 1355 catcaagagcgaaatattggttcctctctgctggcctgaacatgtagaacatgaacaggt 1296 Query: 445 agaatgccatggtggccacctcctctgccgcaacactcacccatctgtacttgtagttgg 504 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1295 agaatgccacagtggccacctcctctgcggcaacactcacccatctgtacttgtagttgg 1236 Query: 505 tgattgtctt 514 |||||||||| Sbjct: 1235 tgattgtctt 1226 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Minus Query: 72 gaagcaaaactgagacttggcaaaatgacagcagtgattgaattcgcctagtttgcaaca 131 |||||||| ||||| ||||||||||| || || ||| | ||| | |||| ||||||||| Sbjct: 1673 gaagcaaacctgagtattggcaaaatggcaacattgaataaatgcccctaatttgcaaca 1614 Query: 132 caagca 137 |||||| Sbjct: 1613 caagca 1608
>dbj|AK106145.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H02, full insert sequence Length = 1599 Score = 242 bits (122), Expect = 9e-61 Identities = 265/310 (85%), Gaps = 12/310 (3%) Strand = Plus / Minus Query: 213 acatagacaaatataagttaaatcctgcatctgtatagtatgatcaacatcacaaggagg 272 ||||||| ||||||| | ||||||||||||||||||||||||| | |||||| | ||||| Sbjct: 1492 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1434 Query: 273 agaaactgaacaggtagtgctgcatttcctgtcatcatgtatcccctc---gtatca--- 326 ||||| ||||||||| |||| |||||| |||||||||||| ||| | |||| Sbjct: 1433 agaaattgaacaggtcaggctgtatttcc---catcatgtatcctctcactggatcacaa 1377 Query: 327 --ctctagagctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcat 384 ||||||||||| || |||||||| ||||| |||| ||| ||||| |||||||| || | Sbjct: 1376 cactctagagctcaaactcctcctcccggagtgccagctctgcagcttcctcctcatcct 1317 Query: 385 catccagagcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgt 444 |||| ||||| || || ||||||||||| || ||| ||||||||||||||||||||| || Sbjct: 1316 catcaagagcgaaatattggttcctctctgctggcctgaacatgtagaacatgaacaggt 1257 Query: 445 agaatgccatggtggccacctcctctgccgcaacactcacccatctgtacttgtagttgg 504 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1256 agaatgccacagtggccacctcctctgcggcaacactcacccatctgtacttgtagttgg 1197 Query: 505 tgattgtctt 514 |||||||||| Sbjct: 1196 tgattgtctt 1187
>dbj|AK098958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063N02, full insert sequence Length = 1656 Score = 242 bits (122), Expect = 9e-61 Identities = 265/310 (85%), Gaps = 12/310 (3%) Strand = Plus / Minus Query: 213 acatagacaaatataagttaaatcctgcatctgtatagtatgatcaacatcacaaggagg 272 ||||||| ||||||| | ||||||||||||||||||||||||| | |||||| | ||||| Sbjct: 1532 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1474 Query: 273 agaaactgaacaggtagtgctgcatttcctgtcatcatgtatcccctc---gtatca--- 326 ||||| ||||||||| |||| |||||| |||||||||||| ||| | |||| Sbjct: 1473 agaaattgaacaggtcaggctgtatttcc---catcatgtatcctctcactggatcacaa 1417 Query: 327 --ctctagagctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcat 384 ||||||||||| || |||||||| ||||| |||| ||| ||||| |||||||| || | Sbjct: 1416 cactctagagctcaaactcctcctcccggagtgccagctctgcagcttcctcctcatcct 1357 Query: 385 catccagagcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgt 444 |||| ||||| || || ||||||||||| || ||| ||||||||||||||||||||| || Sbjct: 1356 catcaagagcgaaatattggttcctctctgctggcctgaacatgtagaacatgaacaggt 1297 Query: 445 agaatgccatggtggccacctcctctgccgcaacactcacccatctgtacttgtagttgg 504 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1296 agaatgccacagtggccacctcctctgcggcaacactcacccatctgtacttgtagttgg 1237 Query: 505 tgattgtctt 514 |||||||||| Sbjct: 1236 tgattgtctt 1227
>dbj|AK066629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071A10, full insert sequence Length = 1745 Score = 242 bits (122), Expect = 9e-61 Identities = 265/310 (85%), Gaps = 12/310 (3%) Strand = Plus / Minus Query: 213 acatagacaaatataagttaaatcctgcatctgtatagtatgatcaacatcacaaggagg 272 ||||||| ||||||| | ||||||||||||||||||||||||| | |||||| | ||||| Sbjct: 1533 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1475 Query: 273 agaaactgaacaggtagtgctgcatttcctgtcatcatgtatcccctc---gtatca--- 326 ||||| ||||||||| |||| |||||| |||||||||||| ||| | |||| Sbjct: 1474 agaaattgaacaggtcaggctgtatttcc---catcatgtatcctctcactggatcacaa 1418 Query: 327 --ctctagagctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcat 384 ||||||||||| || |||||||| ||||| |||| ||| ||||| |||||||| || | Sbjct: 1417 cactctagagctcaaactcctcctcccggagtgccagctctgcagcttcctcctcatcct 1358 Query: 385 catccagagcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgt 444 |||| ||||| || || ||||||||||| || ||| ||||||||||||||||||||| || Sbjct: 1357 catcaagagcgaaatattggttcctctctgctggcctgaacatgtagaacatgaacaggt 1298 Query: 445 agaatgccatggtggccacctcctctgccgcaacactcacccatctgtacttgtagttgg 504 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1297 agaatgccacagtggccacctcctctgcggcaacactcacccatctgtacttgtagttgg 1238 Query: 505 tgattgtctt 514 |||||||||| Sbjct: 1237 tgattgtctt 1228 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Minus Query: 72 gaagcaaaactgagacttggcaaaatgacagcagtgattgaattcgcctagtttgcaaca 131 |||||||| ||||| ||||||||||| || || ||| | ||| | |||| ||||||||| Sbjct: 1675 gaagcaaacctgagtattggcaaaatggcaacattgaataaatgcccctaatttgcaaca 1616 Query: 132 caagca 137 |||||| Sbjct: 1615 caagca 1610
>dbj|AK061720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A01, full insert sequence Length = 1599 Score = 242 bits (122), Expect = 9e-61 Identities = 265/310 (85%), Gaps = 12/310 (3%) Strand = Plus / Minus Query: 213 acatagacaaatataagttaaatcctgcatctgtatagtatgatcaacatcacaaggagg 272 ||||||| ||||||| | ||||||||||||||||||||||||| | |||||| | ||||| Sbjct: 1492 acatagataaatataggctaaatcctgcatctgtatagtatgaccgacatca-atggagg 1434 Query: 273 agaaactgaacaggtagtgctgcatttcctgtcatcatgtatcccctc---gtatca--- 326 ||||| ||||||||| |||| |||||| |||||||||||| ||| | |||| Sbjct: 1433 agaaattgaacaggtcaggctgtatttcc---catcatgtatcctctcactggatcacaa 1377 Query: 327 --ctctagagctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcat 384 ||||||||||| || |||||||| ||||| |||| ||| ||||| |||||||| || | Sbjct: 1376 cactctagagctcaaactcctcctcccggagtgccagctctgcagcttcctcctcatcct 1317 Query: 385 catccagagcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgt 444 |||| ||||| || || ||||||||||| || ||| ||||||||||||||||||||| || Sbjct: 1316 catcaagagcgaaatattggttcctctctgctggcctgaacatgtagaacatgaacaggt 1257 Query: 445 agaatgccatggtggccacctcctctgccgcaacactcacccatctgtacttgtagttgg 504 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1256 agaatgccacagtggccacctcctctgcggcaacactcacccatctgtacttgtagttgg 1197 Query: 505 tgattgtctt 514 |||||||||| Sbjct: 1196 tgattgtctt 1187
>ref|NM_190492.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 210 bits (106), Expect = 3e-51 Identities = 166/186 (89%) Strand = Plus / Minus Query: 329 ctagagctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcatcatc 388 ||||||||| || |||||||| ||||| |||| ||| ||||| |||||||| || ||||| Sbjct: 1350 ctagagctcaaactcctcctcccggagtgccagctctgcagcttcctcctcatcctcatc 1291 Query: 389 cagagcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgtagaa 448 ||||| || || ||||||||||| || ||| ||||||||||||||||||||| |||||| Sbjct: 1290 aagagcgaaatattggttcctctctgctggcctgaacatgtagaacatgaacaggtagaa 1231 Query: 449 tgccatggtggccacctcctctgccgcaacactcacccatctgtacttgtagttggtgat 508 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1230 tgccacagtggccacctcctctgcggcaacactcacccatctgtacttgtagttggtgat 1171 Query: 509 tgtctt 514 |||||| Sbjct: 1170 tgtctt 1165
>gb|AY110073.1| Zea mays CL26733_1 mRNA sequence Length = 731 Score = 184 bits (93), Expect = 2e-43 Identities = 162/185 (87%) Strand = Plus / Plus Query: 328 tctagagctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcatcat 387 |||||||||| || |||| ||||||||| ||||||| || || ||||| || || || | Sbjct: 217 tctagagctcaaactcctgctcacggagcaccatctctgcggcttcctcatcatcctcgt 276 Query: 388 ccagagcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgtaga 447 | || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 277 caagtgcaaagtactggttcctctcagctggcctgaacatgtagaacatgaacatgtaga 336 Query: 448 atgccatggtggccacctcctctgccgcaacactcacccatctgtacttgtagttggtga 507 |||||||||||| |||||||| || ||||| ||||||||||||||||||||||| || | Sbjct: 337 atgccatggtggagacctcctcggctgcaacgctcacccatctgtacttgtagttagtaa 396 Query: 508 ttgtc 512 ||||| Sbjct: 397 ttgtc 401 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 197 gaagatttaccacagtacatagacaaatataagttaaatcctgcatctgtatagtatgat 256 |||||||||||||| ||| |||||| |||| || |||| |||| |||||||||||||||| Sbjct: 86 gaagatttaccacaatacgtagacatatattagctaaaccctgaatctgtatagtatgat 145 Query: 257 caacatcaca 266 |||||||||| Sbjct: 146 caacatcaca 155
>ref|XM_475381.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 73.8 bits (37), Expect = 5e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 333 agctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcatcatccaga 392 |||||||||||||| || ||||| ||||||| |||||||||||||| || || || | Sbjct: 1373 agctcgaattcctcttcccggagcaccatctcagcagcctcctcctcatcttcgtcgaac 1314 Query: 393 gcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgtagaatgcc 452 | |||||| | ||||||| ||||| |||| ||||||||||||| | |||||||||| Sbjct: 1313 gaaaagtatctgctcctctcggccggtctgaatgtgtagaacatgaagaggtagaatgcc 1254 Query: 453 atggtggccacctcctc 469 | |||||||||||||| Sbjct: 1253 aatgtggccacctcctc 1237
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 73.8 bits (37), Expect = 5e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 333 agctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcatcatccaga 392 |||||||||||||| || ||||| ||||||| |||||||||||||| || || || | Sbjct: 70613 agctcgaattcctcttcccggagcaccatctcagcagcctcctcctcatcttcgtcgaac 70554 Query: 393 gcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgtagaatgcc 452 | |||||| | ||||||| ||||| |||| ||||||||||||| | |||||||||| Sbjct: 70553 gaaaagtatctgctcctctcggccggtctgaatgtgtagaacatgaagaggtagaatgcc 70494 Query: 453 atggtggccacctcctc 469 | |||||||||||||| Sbjct: 70493 aatgtggccacctcctc 70477
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 73.8 bits (37), Expect = 5e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 333 agctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcatcatccaga 392 |||||||||||||| || ||||| ||||||| |||||||||||||| || || || | Sbjct: 22575563 agctcgaattcctcttcccggagcaccatctcagcagcctcctcctcatcttcgtcgaac 22575504 Query: 393 gcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgtagaatgcc 452 | |||||| | ||||||| ||||| |||| ||||||||||||| | |||||||||| Sbjct: 22575503 gaaaagtatctgctcctctcggccggtctgaatgtgtagaacatgaagaggtagaatgcc 22575444 Query: 453 atggtggccacctcctc 469 | |||||||||||||| Sbjct: 22575443 aatgtggccacctcctc 22575427
>dbj|AK064348.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-A01, full insert sequence Length = 1746 Score = 73.8 bits (37), Expect = 5e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 333 agctcgaattcctcctcacggagagccatctccgcagcctcctcctcgtcatcatccaga 392 |||||||||||||| || ||||| ||||||| |||||||||||||| || || || | Sbjct: 1447 agctcgaattcctcttcccggagcaccatctcagcagcctcctcctcatcttcgtcgaac 1388 Query: 393 gcaaagtactggttcctctcagccggcttgaacatgtagaacatgaacatgtagaatgcc 452 | |||||| | ||||||| ||||| |||| ||||||||||||| | |||||||||| Sbjct: 1387 gaaaagtatctgctcctctcggccggtctgaatgtgtagaacatgaagaggtagaatgcc 1328 Query: 453 atggtggccacctcctc 469 | |||||||||||||| Sbjct: 1327 aatgtggccacctcctc 1311
>gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, complete sequence Length = 205069 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 180 aagaaataaacagaagtgaagatt 203 |||||||||||||||||||||||| Sbjct: 102170 aagaaataaacagaagtgaagatt 102147
>ref|NM_190491.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 421 tgaacatgtagaacatgaacatgtagaatgc 451 |||||||| |||||||||||| ||||||||| Sbjct: 763 tgaacatgcagaacatgaacaggtagaatgc 733
>ref|XM_323868.1| Neurospora crassa OR74A predicted protein (NCU04516.1) partial mRNA Length = 483 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 367 cagcctcctcctcgtcatcatcc 389 ||||||||||||||||||||||| Sbjct: 442 cagcctcctcctcgtcatcatcc 420
>ref|XM_951834.1| Neurospora crassa OR74A hypothetical protein (NCU04516.1) partial mRNA Length = 483 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 367 cagcctcctcctcgtcatcatcc 389 ||||||||||||||||||||||| Sbjct: 442 cagcctcctcctcgtcatcatcc 420
>gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, complete sequence Length = 200028 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 28 caaatgaaattgtttgctcataa 50 ||||||||||||||||||||||| Sbjct: 68216 caaatgaaattgtttgctcataa 68238
>gb|AC170265.4| Mus musculus BAC RP23-54H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210754 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 73 aagcaaaactgagacttggcaa 94 |||||||||||||||||||||| Sbjct: 5788 aagcaaaactgagacttggcaa 5809
>ref|XM_517967.1| PREDICTED: Pan troglodytes hypothetical protein XP_517967 (LOC462107), mRNA Length = 1496 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 374 ctcctcgtcatcatccagagca 395 |||||||||||||||||||||| Sbjct: 316 ctcctcgtcatcatccagagca 337
>gb|BC047779.1| Homo sapiens hypothetical protein LOC340061, mRNA (cDNA clone MGC:54293 IMAGE:5762441), complete cds Length = 1714 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 374 ctcctcgtcatcatccagagca 395 |||||||||||||||||||||| Sbjct: 208 ctcctcgtcatcatccagagca 229
>dbj|AK095896.1| Homo sapiens cDNA FLJ38577 fis, clone HCHON2007650 Length = 3200 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 374 ctcctcgtcatcatccagagca 395 |||||||||||||||||||||| Sbjct: 199 ctcctcgtcatcatccagagca 220
>gb|AC138517.2| Homo sapiens chromosome 5 clone XXfos-850G5, complete sequence Length = 42673 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 374 ctcctcgtcatcatccagagca 395 |||||||||||||||||||||| Sbjct: 24765 ctcctcgtcatcatccagagca 24744
>gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193116 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 aagcaaaactgagacttggcaa 94 |||||||||||||||||||||| Sbjct: 101034 aagcaaaactgagacttggcaa 101013
>ref|NM_198282.1| Homo sapiens hypothetical protein LOC340061 (LOC340061), mRNA Length = 1714 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 374 ctcctcgtcatcatccagagca 395 |||||||||||||||||||||| Sbjct: 208 ctcctcgtcatcatccagagca 229
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 atctccgcagcctcctcctcg 380 ||||||||||||||||||||| Sbjct: 158205 atctccgcagcctcctcctcg 158185
>ref|XM_847794.1| PREDICTED: Canis familiaris similar to lamina-associated polypeptide 1B (LOC610317), mRNA Length = 2233 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 aaggaggagaaactgaacagg 286 ||||||||||||||||||||| Sbjct: 989 aaggaggagaaactgaacagg 1009
>gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complete sequence Length = 115045 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 cataaggaaataaaacaactggcca 70 ||||||||||||||| ||||||||| Sbjct: 94217 cataaggaaataaaagaactggcca 94193
>gb|AC148447.3| Pan troglodytes chromosome X clone RP43-041A20 map human ortholog p11.3, complete sequence Length = 210474 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 aagaaataaacagaagtgaag 200 ||||||||||||||||||||| Sbjct: 174420 aagaaataaacagaagtgaag 174400
>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence Length = 169225 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 cataaggaaataaaacaactggcca 70 ||||||||||||||| ||||||||| Sbjct: 144113 cataaggaaataaaagaactggcca 144137
>ref|XM_500543.1| Yarrowia lipolytica CLIB122, YALI0B05764g predicted mRNA Length = 1203 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 agcctcctcctcgtcatcatc 388 ||||||||||||||||||||| Sbjct: 591 agcctcctcctcgtcatcatc 571
>emb|AL034370.1|HSA218J18 Human DNA sequence from clone RP6-218J18 on chromosome Xp11.3-11.4 Contains the NDP gene for norrie disease (pseudoglioma), a RNA-binding region (RNP1, RRM) containing 2 (RNPC2) pseudogene, a novel gene and a CpG island, complete sequence Length = 119945 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 aagaaataaacagaagtgaag 200 ||||||||||||||||||||| Sbjct: 103568 aagaaataaacagaagtgaag 103548
>emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome 5, BAC clone F13G24 (ESSA project) Length = 88095 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 aaaactgagacttggcaaaat 97 ||||||||||||||||||||| Sbjct: 79269 aaaactgagacttggcaaaat 79249
>gb|AC163734.3| Pan troglodytes BAC clone CH251-558I15 from chromosome unknown, complete sequence Length = 157458 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 aagaaataaacagaagtgaag 200 ||||||||||||||||||||| Sbjct: 16864 aagaaataaacagaagtgaag 16844
>gb|AC010269.6| Homo sapiens chromosome 5 clone CTC-485I21, complete sequence Length = 187084 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 gtttgctcataaggaaataaaacaa 63 ||||||||||||||||||| ||||| Sbjct: 166872 gtttgctcataaggaaatacaacaa 166848
>gb|AC007351.40|AC007351 Homo sapiens 12 BAC RP11-492N15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195501 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 tcataaggaaataaaacaact 65 ||||||||||||||||||||| Sbjct: 30861 tcataaggaaataaaacaact 30841
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 cctcctcctcgtcatcatcca 390 ||||||||||||||||||||| Sbjct: 19486966 cctcctcctcgtcatcatcca 19486986
>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 agaaataaacagaagtgaaga 201 ||||||||||||||||||||| Sbjct: 83432 agaaataaacagaagtgaaga 83412
>gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, complete sequence Length = 192708 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 gtttgctcataaggaaataaaacaa 63 ||||||||||||||||||| ||||| Sbjct: 36748 gtttgctcataaggaaatacaacaa 36724
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 cctcctcctcgtcatcatcca 390 ||||||||||||||||||||| Sbjct: 105375 cctcctcctcgtcatcatcca 105395
>gb|AC147637.3| Mus musculus BAC clone RP23-205M20 from 9, complete sequence Length = 211684 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 355 gagccatctccgcagcctcctcctc 379 ||||||||||| ||||||||||||| Sbjct: 14451 gagccatctccccagcctcctcctc 14475
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 agcctcctcctcgtcatcatc 388 ||||||||||||||||||||| Sbjct: 776834 agcctcctcctcgtcatcatc 776854
>dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT37I11, TM0302a, complete sequence Length = 96704 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 ataaggaaataaaacaactggccac 71 |||||||| |||||||||||||||| Sbjct: 73772 ataaggaattaaaacaactggccac 73796
>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541, complete sequence Length = 110985 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 ataaggaaataaaacaactggccac 71 |||||||| |||||||||||||||| Sbjct: 59647 ataaggaattaaaacaactggccac 59671
>gb|AC154874.9| Mus musculus chromosome 15, clone RP23-227M7, complete sequence Length = 206926 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 355 gagccatctccgcagcctcctcctc 379 ||||||||||| ||||||||||||| Sbjct: 117403 gagccatctccccagcctcctcctc 117379
>ref|XM_482248.1| Oryza sativa (japonica cultivar-group), mRNA Length = 770 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 aacatcacaaggaggagaaa 277 |||||||||||||||||||| Sbjct: 93 aacatcacaaggaggagaaa 112
>gb|AC120020.9| Mus musculus chromosome 16, clone RP24-251L14, complete sequence Length = 153700 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gagccatctccgcagcctcctcct 378 ||||||||||| |||||||||||| Sbjct: 4585 gagccatctccccagcctcctcct 4562
>ref|XM_466718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 783 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatccagag 393 |||||||||| ||||||||||||| Sbjct: 470 cctcctcctcatcatcatccagag 447
>gb|BC049497.1| Danio rerio 5'-nucleotidase, cytosolic II, mRNA (cDNA clone MGC:56594 IMAGE:5915251), complete cds Length = 3204 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 1711 cctcctcctcgtcatcatcc 1692
>gb|AC159321.3| Mus musculus BAC clone RP23-18G14 from chromosome 6, complete sequence Length = 202584 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 agctaaaagaaataaacaga 193 |||||||||||||||||||| Sbjct: 189271 agctaaaagaaataaacaga 189252
>gb|AC103934.10| Mus musculus chromosome 6, clone RP23-287O14, complete sequence Length = 208817 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 agctaaaagaaataaacaga 193 |||||||||||||||||||| Sbjct: 163153 agctaaaagaaataaacaga 163134
>ref|XM_382024.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01848.1) partial mRNA Length = 798 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 367 cctcctcctcgtcatcatcc 348
>ref|XM_749964.1| Aspergillus fumigatus Af293 DNA repair protein Rad18 (Afu3g05440) partial mRNA Length = 3249 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcctcgtcatcatccagagc 394 |||||||||||||||||||| Sbjct: 254 tcctcgtcatcatccagagc 235
>gb|AC131771.2| Mus musculus BAC clone RP24-297P10 from chromosome 10, complete sequence Length = 145678 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tgagacttggcaaaatgaca 101 |||||||||||||||||||| Sbjct: 55700 tgagacttggcaaaatgaca 55719
>gb|AC125399.3| Mus musculus BAC clone RP24-245C15 from chromosome 14, complete sequence Length = 195425 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aaaagaaataaacagaagtg 197 |||||||||||||||||||| Sbjct: 127337 aaaagaaataaacagaagtg 127318
>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence Length = 195651 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 agagccatctccgcagcctcctcc 377 |||||||||||| ||||||||||| Sbjct: 138576 agagccatctccccagcctcctcc 138599
>gb|AC011290.3| Homo sapiens BAC clone RP11-64I2 from 7, complete sequence Length = 117764 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aatgttctcttctcactgta 27 |||||||||||||||||||| Sbjct: 102386 aatgttctcttctcactgta 102367
>emb|AL590428.7| Human DNA sequence from clone RP11-553A21 on chromosome 6 Contains the 5' end of the SLC17A5 gene for solute carrier family 17 (anion/sugar transporter), member 5, the 5' end of the gene for CD109 (CD109) and three CpG islands, complete sequence Length = 163577 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 ttgaacatgtagaacatgaacatg 443 ||||||||||||||||| |||||| Sbjct: 149483 ttgaacatgtagaacattaacatg 149506
>emb|AL583808.6| Human DNA sequence from clone RP11-262K1 on chromosome 1 Contains a novel gene, complete sequence Length = 174642 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 agtacatagacaaatataag 229 |||||||||||||||||||| Sbjct: 41904 agtacatagacaaatataag 41885
>emb|AL117350.12|HSJ803J11 Human DNA sequence from clone RP4-803J11 on chromosome 1 Contains the 3' end of the RAB4A gene for RAB4A, member RAS oncogene family, a novel gene, a novel gene (LOC126731) and a CpG island, complete sequence Length = 106441 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 gcaacatttgaagctaaaagaaat 186 |||||||| ||||||||||||||| Sbjct: 16800 gcaacattggaagctaaaagaaat 16823
>emb|BX070474.1|CNS09QJI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC7CD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 540 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 388 cctcctcctcgtcatcatcc 407
>emb|BX070473.1|CNS09QJH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7CD03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 288 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 201 cctcctcctcgtcatcatcc 182
>ref|XM_787430.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5535-PA, isoform A (LOC587719), partial mRNA Length = 373 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 acggagagccatctccgcagcctc 373 |||||||| ||||||||||||||| Sbjct: 104 acggagaggcatctccgcagcctc 81
>emb|BX034845.1|CNS08Z1T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA50DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 984 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 244 cctcctcctcgtcatcatcc 225
>emb|BX006340.1|CNS08D20 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA10DA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 755 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 240 cctcctcctcgtcatcatcc 221
>emb|X95989.1|DASRASECE D.ambivalens ORF1 and ORF2, sra & secE genes Length = 2331 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 taaacagaagtgaagattta 205 |||||||||||||||||||| Sbjct: 506 taaacagaagtgaagattta 525
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 cagcctcctcctcgtcatca 386 |||||||||||||||||||| Sbjct: 75942 cagcctcctcctcgtcatca 75961
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 cagcctcctcctcgtcatca 386 |||||||||||||||||||| Sbjct: 173012 cagcctcctcctcgtcatca 173031
>emb|AL662894.11| Mouse DNA sequence from clone RP23-467C13 on chromosome 11, complete sequence Length = 94854 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 gagccatctccgcagcctcc 374 |||||||||||||||||||| Sbjct: 51983 gagccatctccgcagcctcc 52002
>gb|AC026367.14| Homo sapiens 12 BAC RP11-131L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181445 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 162 ggcaacatttgaagctaaaagaaataaa 189 ||||||||| ||||||||||| |||||| Sbjct: 160076 ggcaacattggaagctaaaagcaataaa 160049
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 2288270 cctcctcctcgtcatcatcc 2288251
>ref|XM_702636.1| PREDICTED: Danio rerio similar to 5-nucleotidase, cytosolic II, transcript variant 2 (LOC560539), mRNA Length = 2246 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 1699 cctcctcctcgtcatcatcc 1680
>ref|XM_679911.1| PREDICTED: Danio rerio similar to 5-nucleotidase, cytosolic II, transcript variant 1 (LOC560539), mRNA Length = 2267 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 1720 cctcctcctcgtcatcatcc 1701
>dbj|AK053625.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130115J04 product:unclassifiable, full insert sequence Length = 4259 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 gagccatctccgcagcctcctcct 378 ||||||||||| |||||||||||| Sbjct: 422 gagccatctccccagcctcctcct 445
>emb|BX248115.12| Zebrafish DNA sequence from clone CH211-208K15 in linkage group 16, complete sequence Length = 211852 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 acagtacatagacaaatata 227 |||||||||||||||||||| Sbjct: 197600 acagtacatagacaaatata 197581
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 cagcctcctcctcgtcatca 386 |||||||||||||||||||| Sbjct: 30036260 cagcctcctcctcgtcatca 30036279
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 aacatcacaaggaggagaaa 277 |||||||||||||||||||| Sbjct: 19010987 aacatcacaaggaggagaaa 19010968
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agaaataaacagaagtgaag 200 |||||||||||||||||||| Sbjct: 18674023 agaaataaacagaagtgaag 18674042
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 cctcctcctcgtcatcatccagag 393 |||||||||| ||||||||||||| Sbjct: 24259798 cctcctcctcatcatcatccagag 24259821 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 accacagtacatagacaaatataa 228 |||||||||||||| ||||||||| Sbjct: 8519472 accacagtacatagtcaaatataa 8519495
>gb|AC146134.4| Pan troglodytes BAC clone RP43-4D8 from chromosome 7, complete sequence Length = 177594 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aatgttctcttctcactgta 27 |||||||||||||||||||| Sbjct: 102487 aatgttctcttctcactgta 102506
>ref|NM_201427.1| Danio rerio 5'-nucleotidase, cytosolic II (nt5c2), mRNA Length = 3204 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 1711 cctcctcctcgtcatcatcc 1692
>gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, complete sequence Length = 161984 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tctccgcagcctcctcctcg 380 |||||||||||||||||||| Sbjct: 103845 tctccgcagcctcctcctcg 103864
>ref|XM_343473.2| PREDICTED: Rattus norvegicus similar to PL6 protein (predicted) (LOC363136), mRNA Length = 2078 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 cagcctcctcctcgtcatcatcca 390 |||||||||| ||||||||||||| Sbjct: 1335 cagcctcctcttcgtcatcatcca 1312
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agaaataaacagaagtgaag 200 |||||||||||||||||||| Sbjct: 99077 agaaataaacagaagtgaag 99096
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1198_B10 Length = 119768 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 aacatcacaaggaggagaaa 277 |||||||||||||||||||| Sbjct: 95907 aacatcacaaggaggagaaa 95888
>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0055I24 Length = 155872 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agaaataaacagaagtgaag 200 |||||||||||||||||||| Sbjct: 6311 agaaataaacagaagtgaag 6330
>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6, complete sequence Length = 143341 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 actgtacaaatgaaattgtt 41 |||||||||||||||||||| Sbjct: 45247 actgtacaaatgaaattgtt 45266
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2055_H10 Length = 119290 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 cctcctcctcgtcatcatccagag 393 |||||||||| ||||||||||||| Sbjct: 60186 cctcctcctcatcatcatccagag 60209
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1113_G05 Length = 131445 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 accacagtacatagacaaatataa 228 |||||||||||||| ||||||||| Sbjct: 68742 accacagtacatagtcaaatataa 68765
>emb|AL928951.17| Zebrafish DNA sequence from clone CH211-67N3, complete sequence Length = 183050 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 74492 cctcctcctcgtcatcatcc 74473
>dbj|AB073160.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC clone:T11G11 Length = 82451 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatcc 389 |||||||||||||||||||| Sbjct: 44590 cctcctcctcgtcatcatcc 44571
>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1051_A08 Length = 137583 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 aacatcacaaggaggagaaa 277 |||||||||||||||||||| Sbjct: 35774 aacatcacaaggaggagaaa 35755
>dbj|AK072742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139O15, full insert sequence Length = 768 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 aacatcacaaggaggagaaa 277 |||||||||||||||||||| Sbjct: 91 aacatcacaaggaggagaaa 110
>dbj|AK070801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072A11, full insert sequence Length = 2594 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 cagcctcctcctcgtcatca 386 |||||||||||||||||||| Sbjct: 538 cagcctcctcctcgtcatca 557
>dbj|AK065073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K10, full insert sequence Length = 3470 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 accacagtacatagacaaatataa 228 |||||||||||||| ||||||||| Sbjct: 1868 accacagtacatagtcaaatataa 1891
>gb|AC152415.4| Mus musculus BAC clone RP23-359F16 from 10, complete sequence Length = 195249 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tgagacttggcaaaatgaca 101 |||||||||||||||||||| Sbjct: 173987 tgagacttggcaaaatgaca 174006
>dbj|AK061591.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B05, full insert sequence Length = 783 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 cctcctcctcgtcatcatccagag 393 |||||||||| ||||||||||||| Sbjct: 470 cctcctcctcatcatcatccagag 447
>emb|AL157997.5|CNS01RGI Human chromosome 14 DNA sequence BAC R-50H7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170072 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 aaactgagacttggcaaaat 97 |||||||||||||||||||| Sbjct: 13397 aaactgagacttggcaaaat 13378
>emb|AL356021.4|CNS05TDB Human chromosome 14 DNA sequence BAC R-783L4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 184656 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 aaactgagacttggcaaaat 97 |||||||||||||||||||| Sbjct: 181060 aaactgagacttggcaaaat 181041
>gb|AC154284.1| Mus musculus BAC clone RP23-452N24 from 16, complete sequence Length = 182088 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gagccatctccgcagcctcctcct 378 ||||||||||| |||||||||||| Sbjct: 80187 gagccatctccccagcctcctcct 80164 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,006,631 Number of Sequences: 3902068 Number of extensions: 6006631 Number of successful extensions: 128609 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127928 Number of HSP's gapped (non-prelim): 680 length of query: 515 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 492 effective length of database: 17,143,297,704 effective search space: 8434502470368 effective search space used: 8434502470368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)