>POLG_RTSVA (Q83034) Genome polyprotein [Contains: Putative leader protein;|
           Coat protein 1 (25 kDa protein) (CP-1); Coat protein 2
           (26 kDa protein) (CP-2); Coat protein 3 (35 kDa protein)
           (CP-3); Putative helicase (EC 3.6.1.-) (Putative
           NTP-binding protei
          Length = 3473

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 153 GVRCLHQKRMVGKSTLYRNYC 215
           GVRC HQ  + GK+ ++ NYC
Sbjct: 24  GVRCAHQGWVSGKAVVFCNYC 44

>POLG_RTSVT (Q91PP5) Genome polyprotein [Contains: Putative leader protein;|
           Coat protein 1 (25 kDa protein) (CP-1); Coat protein 2
           (26 kDa protein) (CP-2); Coat protein 3 (35 kDa protein)
           (CP-3); Putative helicase (EC 3.6.1.-) (Putative
           NTP-binding protei
          Length = 3471

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 153 GVRCLHQKRMVGKSTLYRNYC 215
           GVRC HQ  + GK+ ++ NYC
Sbjct: 24  GVRCAHQGWVSGKAVVFCNYC 44

>RB97D_DROME (Q02926) Ribonucleoprotein RB97D|
          Length = 471

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 101 PMIVNGLRTLPPTYDNLWSSMPPPKTNGGKIHPLQKLLPSNVKKI 235
           P  +NG    PP   N W++ PPP     + H  Q   P  V+++
Sbjct: 292 PQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCPPPVQQV 336

>DADA2_PSEPK (Q88CB1) D-amino acid dehydrogenase 2 small subunit (EC 1.4.99.1)|
          Length = 434

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +2

Query: 2   EKLDHNLSRIPGQWI*GKLPSNDSGHILQLKLNPMIVNGLRTLPPTYDNLWSSMPPPKTN 181
           ++LD    RI G WI GKL + D   +     +P ++  L    P Y     S+  P TN
Sbjct: 225 QRLDFAGDRINGVWIDGKLETADRYVLALGSYSPQMLKPLGIKAPVYPLKGYSLTVPITN 284

>CSF3R_HUMAN (Q99062) Granulocyte colony-stimulating factor receptor precursor|
           (G-CSF-R) (CD114 antigen)
          Length = 836

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 50  GKLPSNDSGHILQLKLNPMIVNGLRTLPPTYDNLWSSMPP 169
           G   S   GH L+      ++ GL   P +Y+NLW    P
Sbjct: 757 GSPTSPGPGHYLRCDSTQPLLAGLTPSPKSYENLWFQASP 796

>CCMO_SYNP7 (P46205) Hypothetical protein ccmO precursor|
          Length = 276

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 110 VNGLRTLPPTYDNLWSSMPPPKTNGGKIHPLQKLLPSNVKK 232
           +N +  +P   D+L  S+P P+++     PLQ  LP  V++
Sbjct: 186 LNAIMVIPRPLDDLMDSLPEPQSDSEAAQPLQ--LPLRVRE 224

>CCMO_SYNP6 (P23656) Hypothetical protein ccmO precursor|
          Length = 276

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 110 VNGLRTLPPTYDNLWSSMPPPKTNGGKIHPLQKLLPSNVKK 232
           +N +  +P   D+L  S+P P+++     PLQ  LP  V++
Sbjct: 186 LNAIMVIPRPLDDLMDSLPEPQSDSEAAQPLQ--LPLRVRE 224


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,212,533
Number of Sequences: 219361
Number of extensions: 829469
Number of successful extensions: 2362
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2362
length of database: 80,573,946
effective HSP length: 54
effective length of database: 68,728,452
effective search space used: 1649482848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)