Clone Information

BLAST Search Result

Clone Name	rbart40d01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)	37	0.031
2	TXD13_MOUSE (Q8C0L0) Thioredoxin domain-containing protein 13 pr...	35	0.15
3	NFL_COTJA (Q02916) Neurofilament triplet L protein (Neurofilamen...	33	0.34
4	SANT_PLAFN (P04928) S-antigen protein precursor	33	0.34
5	VAT1_BRARE (Q8JFV8) Synaptic vesicle membrane protein VAT-1 homo...	33	0.45
6	SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold atta...	33	0.45
7	SSRP1_CHICK (Q04678) Structure-specific recognition protein 1 (S...	32	0.77
8	DPB3_DEBHA (Q6BX14) DNA polymerase epsilon subunit C (EC 2.7.7.7...	32	0.77
9	CYLC2_BOVIN (Q28092) Cylicin-2 (Cylicin II) (Multiple-band polyp...	32	1.0
10	MST3_DROHY (O01395) Axoneme-associated protein mst101(3)	31	1.7
11	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	31	2.2
12	RPOB_RALSO (Q8XUZ8) DNA-directed RNA polymerase beta chain (EC 2...	31	2.2
13	MLP2_YEAST (P40457) Protein MLP2 (Myosin-like protein 2)	30	2.9
14	CHS5_YEAST (Q12114) Chitin biosynthesis protein CHS5 (Protein CAL3)	30	2.9
15	NOLC1_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 13...	30	3.8
16	GCN5_CANGA (Q6FTW5) Histone acetyltransferase GCN5 (EC 2.3.1.48)	30	3.8
17	RNP4F_DROME (Q9W4D2) RNA-binding protein 4F	30	3.8
18	MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A) ...	30	3.8
19	MNN4_YEAST (P36044) Protein MNN4	30	3.8
20	SEN1_YEAST (Q00416) Helicase SEN1 (EC 3.6.1.-) (tRNA-splicing en...	30	3.8
21	FKB39_DROME (P54397) 39 kDa FK506-binding nuclear protein (EC 5....	30	3.8
22	RS8_SPIKU (Q6XYX4) 30S ribosomal protein S8	30	3.8
23	NFL_XENLA (P35616) Neurofilament triplet L protein (Neurofilamen...	30	3.8
24	CYLC2_HUMAN (Q14093) Cylicin-2 (Cylicin II) (Multiple-band polyp...	30	5.0
25	TTRAP_BRARE (Q5XJA0) TRAF and TNF receptor-associated protein ho...	30	5.0
26	CR030_HUMAN (Q8N787) Protein C18orf30	30	5.0
27	NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neur...	30	5.0
28	DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polype...	29	6.5
29	DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polype...	29	6.5
30	Y382_RICPR (Q9ZDE9) Hypothetical protein RP382	29	6.5
31	CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-...	29	6.5
32	IF2_TREDE (Q73NP6) Translation initiation factor IF-2	29	6.5
33	NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neur...	29	6.5
34	PINI_ARATH (Q9C6B8) Auxin efflux carrier component 1 (Protein PI...	29	6.5
35	NSBP1_HUMAN (P82970) Nucleosome-binding protein 1	29	6.5
36	NO27_SOYBN (P08864) Nodulin 27 precursor (N-27)	29	6.5
37	IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B ...	29	6.5
38	AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein ...	29	6.5
39	NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neur...	29	6.5
40	CAF1A_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-...	29	6.5
41	CNG1_CHICK (Q90805) Cyclic nucleotide-gated channel, cone photor...	29	8.5
42	ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) ...	29	8.5
43	LRC59_BRARE (Q6NWG1) Leucine-rich repeat-containing protein 59	29	8.5
44	T2FA_XENLA (Q04870) Transcription initiation factor IIF alpha su...	29	8.5
45	MCLN2_HUMAN (Q8IZK6) Mucolipin-2	29	8.5
46	CBF5_YEAST (P33322) H/ACA ribonucleoprotein complex subunit 4 (E...	29	8.5
47	AATF_HUMAN (Q9NY61) Protein AATF (Apoptosis-antagonizing transcr...	29	8.5
48	PHSL_VICFA (P53536) Alpha-1,4 glucan phosphorylase, L isozyme, c...	29	8.5
49	MP62_LYTPI (P91753) Mitotic apparatus protein p62	29	8.5
50	NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 ...	29	8.5
51	HANG_DROME (Q9VXG1) Zinc finger protein hangover	29	8.5
52	MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)	29	8.5

>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQG----EKRKSEEIGAG 314
           K+C+++ KK  E    KK + +A+K    K + E +K +  A++G    E++K EE+   
Sbjct: 445 KKCKEAAKKEKEAAERKKCEELAKKI---KKAAEKKKCEETAKKGKEVAERKKCEELAKK 501

Query: 313 TRPSEVKKAKVSLA 272
            + +E+KK    LA
Sbjct: 502 IKKAEIKKKCKKLA 515



 Score = 36.6 bits (83), Expect = 0.041
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARK-DDADAEQGEKRKSEEIGAGTRP 305
           K+CE++ KKG E+   KK + +A+K    ++  + +K    + E  EK+K E+     + 
Sbjct: 477 KKCEETAKKGKEVAERKKCEELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEKAAKKRKE 536

Query: 304 SEVKK 290
           +  KK
Sbjct: 537 AAEKK 541

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>TXD13_MOUSE (Q8C0L0) Thioredoxin domain-containing protein 13 precursor|
          Length = 335

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
 Frame = -3

Query: 493 RAFLKECEQSLKKG-------VELPSEKKDDSVAEKADDGKVSGEARKDD-ADAEQGEKR 338
           RA  + CEQ    G       ++   E+KDDS  E+  D  V  E  K+D  D ++GE+ 
Sbjct: 216 RASSERCEQEQSTGEAQGAEQLQDAEEEKDDSNEEENKDSLVDDEEEKEDIGDEDEGEED 275

Query: 337 KSEEIGAGTRPSE 299
           + E+  AG    E
Sbjct: 276 EEEDNLAGIMAEE 288

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>NFL_COTJA (Q02916) Neurofilament triplet L protein (Neurofilament light|
           polypeptide) (NF-L)
          Length = 555

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSE 329
           E ++  A  +E E+  +   E   E K+    E  +     GE  ++ A+ E GE+ K E
Sbjct: 482 EGEEEEAGGEEAEEEEEGAKEESEEGKEGEEEEGEETAAEDGEESQETAE-ETGEEEKEE 540

Query: 328 EIGAGTRPSEVKK 290
           +  AG   +EVKK
Sbjct: 541 KEAAGKEETEVKK 553

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>SANT_PLAFN (P04928) S-antigen protein precursor|
          Length = 309

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARK-DDADA---EQGEK 341
           ++D+  A LK  E   +K  E  + K D++ A K+D+     EARK D+A+A   ++ E 
Sbjct: 168 KSDEAEA-LKSDEAEARKSDEAEARKSDEAEARKSDEA----EARKSDEAEALKSDEAEA 222

Query: 340 RKSEEIGA 317
           RKS+E  A
Sbjct: 223 RKSDEAEA 230



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKV----SGEARK-DDADA---E 353
           ++D+  A LK  E   +K  E  + K D++ A K+D+ +       EARK D+A+A   +
Sbjct: 144 KSDEAEA-LKSDEAEARKSDEAEALKSDEAEALKSDEAEARKSDEAEARKSDEAEARKSD 202

Query: 352 QGEKRKSEEIGA 317
           + E RKS+E  A
Sbjct: 203 EAEARKSDEAEA 214



 Score = 31.2 bits (69), Expect = 1.7
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKV--SGEA---RKDDADA---E 353
           ++D+  A LK  E   +K  E  + K D++ A K+D+ +   S EA   + D+A+A   +
Sbjct: 120 KSDEAEA-LKSDEAEARKSDEAEALKSDEAEALKSDEAEARKSDEAEALKSDEAEALKSD 178

Query: 352 QGEKRKSEEIGAGTRPSEVKKAKVS 278
           + E RKS+E  A  R S+  +A+ S
Sbjct: 179 EAEARKSDE--AEARKSDEAEARKS 201



 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSE 329
           ++D+  A LK  E   +K  E  + K D++ A K+D+ +       +   +++ E RKS+
Sbjct: 104 KSDEAEA-LKSDEAEARKSDEAEALKSDEAEARKSDEAEALKSDEAEALKSDEAEARKSD 162

Query: 328 EIGA 317
           E  A
Sbjct: 163 EAEA 166



 Score = 30.8 bits (68), Expect = 2.2
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSEKKDDSVAEKADDGKV----SGEARK-DDADA---EQGEKRKSEE 326
           K  E   +K  E  + K D++ A K+D+ +       EARK D+A+A   ++ E RKS+E
Sbjct: 192 KSDEAEARKSDEAEARKSDEAEALKSDEAEARKSDEAEARKSDEAEALKSDEAEARKSDE 251

Query: 325 IGAGTRPSE 299
             A  R SE
Sbjct: 252 --AEARKSE 258

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>VAT1_BRARE (Q8JFV8) Synaptic vesicle membrane protein VAT-1 homolog (EC|
           1.-.-.-)
          Length = 484

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = -3

Query: 472 EQSLKKGVELPSEKKDDSVA-EKADDGKVSGEARKDDADAEQ-GEKRKSEEIGAGTRPSE 299
           E+  K+  +   EKKDD    +K  D K   + +KD+A  E+  +++K EE     + +E
Sbjct: 414 EEEKKEEAKKDEEKKDDKKKDDKKKDDKKKEDKKKDEAKKEEKKDEKKKEEAKKDDKKAE 473

Query: 298 VKKAKV 281
            KK +V
Sbjct: 474 EKKEEV 479



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSE 329
           + D+ +   K+ +   K   +   +KKD++  E+  D K   EA+KDD  AE+ ++   +
Sbjct: 422 KKDEEKKDDKKKDDKKKDDKKKEDKKKDEAKKEEKKDEKKKEEAKKDDKKAEEKKEEVKK 481

Query: 328 E 326
           E
Sbjct: 482 E 482

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>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor|
           B1) (SAF-B) (HSP27 estrogen response element-TATA
           box-binding protein) (HSP27 ERE-TATA-binding protein)
          Length = 915

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = -3

Query: 436 EKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSE 299
           ++KDD  A+K DDG  SGE  KD  D + G   +S    +G+R +E
Sbjct: 520 DRKDD--AKKGDDG--SGEKSKDQDDQKPGPSERSRATKSGSRGTE 561

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>SSRP1_CHICK (Q04678) Structure-specific recognition protein 1 (SSRP1)|
           (Recombination signal sequence recognition protein)
           (T160) (Fragment)
          Length = 669

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = -3

Query: 505 NDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEE 326
           ND      +E ++S   G E      DD VAE+ D    S  +   D D+++GEK+ S+E
Sbjct: 430 NDSSDGSGEETDESFNPGEE------DDDVAEEFDSN-ASSSSSSGDGDSDRGEKKSSQE 482

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>DPB3_DEBHA (Q6BX14) DNA polymerase epsilon subunit C (EC 2.7.7.7) (DNA|
           polymerase II subunit C)
          Length = 277

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -3

Query: 451 VELPSEKKDDSVAEKADDG-KVSGEARKDDADAEQGEKRKSEEIGAGTRPSEVKK 290
           +E P+  +D++VA  + DG KV  E   DD   E+ E+ + EE       S++KK
Sbjct: 45  MEEPNAPQDNTVAPNSIDGEKVQEENEDDDEQEEEEEEEEEEEESLSLPLSKIKK 99

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>CYLC2_BOVIN (Q28092) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)|
          Length = 488

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKD--------DADAE 353
           E++D +A  ++  +  +KG +   E   DS +EK D  K S +++KD        +++ E
Sbjct: 177 ESEDEKAGAEKGAKKDRKGSKKGKETPSDSGSEKGDAKKDSKKSKKDSKGKESATESEGE 236

Query: 352 QGEKRKSEEIG 320
           +G+ +K ++ G
Sbjct: 237 KGDAKKDDKKG 247



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 17/90 (18%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSV-AEK----------------ADDGKVSGE 380
           E  D +  LK+  +  KKG E  +E +D+   AEK                +D G   G+
Sbjct: 153 EKPDEKKDLKKERKDSKKGKESATESEDEKAGAEKGAKKDRKGSKKGKETPSDSGSEKGD 212

Query: 379 ARKDDADAEQGEKRKSEEIGAGTRPSEVKK 290
           A+KD   +++  K K     +     + KK
Sbjct: 213 AKKDSKKSKKDSKGKESATESEGEKGDAKK 242



 Score = 29.3 bits (64), Expect = 6.5
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 17/77 (22%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSE--------KKDDSVAEKADD-GKVS--------GE 380
           E  D +   K+ ++  KKG E  +E        KKDD   +K    GK S        G+
Sbjct: 264 EKGDAKKDDKKGKKGSKKGKESATESEGEKGDAKKDDKKGKKGSKKGKESATESEGEKGD 323

Query: 379 ARKDDADAEQGEKRKSE 329
           A+KDD   ++G K+  E
Sbjct: 324 AKKDDKKGKKGSKKGKE 340

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>MST3_DROHY (O01395) Axoneme-associated protein mst101(3)|
          Length = 275

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
 Frame = -3

Query: 490 AFLKECEQSLKKGVELPS----EKKDDSVAEKADDG---KVSGEARKDDADAEQGEKRKS 332
           AF ++CE++ KK  E       ++K  ++A+K  +    K   EA K  A AE+  K+K+
Sbjct: 151 AFKQKCEEAAKKKKEAKKAAELQQKCAALAKKEKEAEMMKKCEEAAKKKA-AEEAAKKKA 209

Query: 331 EEIGAGTRPSEVKKAK 284
           EE+ A  +  E    K
Sbjct: 210 EEVAAKKKADEAAAKK 225



 Score = 29.3 bits (64), Expect = 6.5
 Identities = 25/79 (31%), Positives = 37/79 (46%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSE 329
           E +DV+   K+CE++  K     + KK+   AEK    K   EA K + +A   EK+K  
Sbjct: 50  EAEDVK---KKCEEAAAKKKCAEAAKKEKEAAEK----KKCAEAAKKEKEA--AEKKKCA 100

Query: 328 EIGAGTRPSEVKKAKVSLA 272
           E     + +  KK    LA
Sbjct: 101 EAAKKEQEAAQKKKCAELA 119

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>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -3

Query: 457  KGVELP-SEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSE 299
            +GVE P +E++     E  +  +  GEA+ +     QGEK+ S ++  G   SE
Sbjct: 2290 EGVEAPEAEEEAQPEPEGVETPEAEGEAQPESGGETQGEKKGSPQVSLGDGQSE 2343

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>RPOB_RALSO (Q8XUZ8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1368

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 24/73 (32%), Positives = 30/73 (41%)
 Frame = -3

Query: 490  AFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGT 311
            A  KE    L K         DD VA + +  K + E ++ D D    EKRK    G   
Sbjct: 1002 ALTKEYLADLDKWHWFDIRPSDDDVATQLEAVKEAIEQKRHDFDLAFEEKRKKLTQGDEL 1061

Query: 310  RPSEVKKAKVSLA 272
             P  +K  KV LA
Sbjct: 1062 PPGVIKMVKVYLA 1074

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>MLP2_YEAST (P40457) Protein MLP2 (Myosin-like protein 2)|
          Length = 1679

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = -3

Query: 502  DDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEI 323
            D+    +KE E++LKK + LPSE++   +  K          RK++ + E+  K+  E  
Sbjct: 1442 DETLRRIKEAEENLKKRIRLPSEERIQKIISK----------RKEELE-EEFRKKLKENA 1490

Query: 322  GAGT 311
            G+ T
Sbjct: 1491 GSLT 1494

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>CHS5_YEAST (Q12114) Chitin biosynthesis protein CHS5 (Protein CAL3)|
          Length = 671

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
 Frame = -3

Query: 496 VRAFLKECEQSLKKGV--------ELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEK 341
           VR F  + +QS+ K          EL   K+++ VAE AD+ K+     +D  D EQ   
Sbjct: 257 VRGFYLDADQSILKNYTFPPVNEEELSYSKENEPVAEVADENKMP----EDTTDVEQVAS 312

Query: 340 RKSEEIGAGTRPSEVKKAKVSLAH 269
               E    + PSE K+      H
Sbjct: 313 PNDNE----SNPSEAKEQGEKSGH 332

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>NOLC1_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)|
           (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar
           and coiled-body phosphoprotein 1)
          Length = 699

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 12/59 (20%), Positives = 28/59 (47%)
 Frame = -3

Query: 460 KKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSEVKKAK 284
           K  + LP+++      + + D   S    +++  ++   K+K +++  G  PS+   AK
Sbjct: 452 KAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAK 510

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>GCN5_CANGA (Q6FTW5) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 546

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/75 (24%), Positives = 33/75 (44%)
 Frame = -3

Query: 505 NDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEE 326
           NDD     +  E+     V++  EKKD+  ++   + K   E  +++ + E       EE
Sbjct: 108 NDDDDDVDESKEEDAAAAVDITKEKKDEQESDNKTEEKKVQENEEEEEEDENKNDEDVEE 167

Query: 325 IGAGTRPSEVKKAKV 281
           +G+     + KK  V
Sbjct: 168 LGSTEPVDDEKKGLV 182

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>RNP4F_DROME (Q9W4D2) RNA-binding protein 4F|
          Length = 941

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
 Frame = -3

Query: 481 KECEQSLKKGV-ELPSEKKDDSVAEK------ADDGKVSGEARKDDADAEQGEKRKSEEI 323
           K+ E+ L+K + E+P+E  DD   ++       D GK S +    ++  +Q E+ KSEE+
Sbjct: 5   KQLERQLEKELDEMPAEDLDDDAYDEYDLIVIPDQGKGSPQQGHSESP-QQEEEHKSEEL 63

Query: 322 GAGTRPS 302
              +RP+
Sbjct: 64  RQRSRPT 70

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>MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)|
           (Proliferation-related protein p80) [Contains: MAP1
           light chain LC2]
          Length = 2805

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = -3

Query: 472 EQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSEVK 293
           ++ LK+ +    EKKD    EK +  K   E +KD+   E+ +  K EE    T+P   K
Sbjct: 402 KKHLKEKISKLEEKKDK---EKKEIKKERKELKKDEGRKEEKKDAKKEEKRKDTKPELKK 458

Query: 292 KAKVSL 275
            +K  L
Sbjct: 459 ISKPDL 464

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>MNN4_YEAST (P36044) Protein MNN4|
          Length = 1178

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/64 (26%), Positives = 32/64 (50%)
 Frame = -3

Query: 481  KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPS 302
            K+ E+  KK  E   +KK++   +K ++ +   +  ++    E+GEK K+E+        
Sbjct: 1068 KKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKNED 1127

Query: 301  EVKK 290
            E KK
Sbjct: 1128 EEKK 1131



 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/64 (26%), Positives = 32/64 (50%)
 Frame = -3

Query: 481  KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPS 302
            K+ E+  KK  E   +KK++   +K ++ +   +  ++    E+ EK+K EE     +  
Sbjct: 1044 KKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEE 1103

Query: 301  EVKK 290
            E KK
Sbjct: 1104 EEKK 1107



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -3

Query: 481  KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEE 326
            K+ E+  KK  E   +KK++   +K ++G+      +++   E  EK+K+EE
Sbjct: 1084 KKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKKKNEE 1135

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>SEN1_YEAST (Q00416) Helicase SEN1 (EC 3.6.1.-) (tRNA-splicing endonuclease|
            positive effector)
          Length = 2231

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 20/66 (30%), Positives = 31/66 (46%)
 Frame = -3

Query: 493  RAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAG 314
            R  + E E++ K   +   EKK +    KADD K + + + +      G K+KS   G  
Sbjct: 1910 RRVVDEGEEADKAVKKKKKEKKKEKKKSKADDKKKNNK-KAESPSTSSGTKKKSSIFGGM 1968

Query: 313  TRPSEV 296
            + PS V
Sbjct: 1969 SVPSAV 1974

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>FKB39_DROME (P54397) 39 kDa FK506-binding nuclear protein (EC 5.2.1.8)|
           (Peptidyl-prolyl cis-trans isomerase) (PPIase)
           (Rotamase)
          Length = 357

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGE-KRKS 332
           + DD    ++E E  L+ G     E+ DD V E  ++     E   DD++AE+ + K K 
Sbjct: 134 DTDDDSQIIEEYESFLENG----EEEDDDDVDEDNEESGEEDEQDSDDSEAEEEQPKAKV 189

Query: 331 EEIGAGTRPSEVKKAKVSLA 272
            ++  G    +  K +  +A
Sbjct: 190 AKLSPGASAKKSGKEQNGVA 209

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>RS8_SPIKU (Q6XYX4) 30S ribosomal protein S8|
          Length = 129

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
 Frame = -3

Query: 499 DVRAFLKECEQSLKKGVELPSEKKDDSVAE------KADDGKVSGEARKD 368
           D+   ++   Q L K V++PS K    +AE        +D KVSG+ +KD
Sbjct: 8   DMLTRIRNANQRLHKSVKMPSSKMKVRIAEILKKEGYVEDFKVSGDIKKD 57

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>NFL_XENLA (P35616) Neurofilament triplet L protein (Neurofilament light|
           polypeptide) (NF-L)
          Length = 543

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSEKKD-DSVAEKADDGKVSGEARKDDADAEQGEKRKSEE 326
           KE E   + G E   E ++ +  AE   DG+  GE++ D+A  E+ EK++ ++
Sbjct: 491 KEEEAEEEGGQEKEEEGEEGEGEAEAEGDGEEEGESKGDEAAEEESEKKEKKK 543

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>CYLC2_HUMAN (Q14093) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)|
          Length = 348

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -3

Query: 481 KECEQSLKKGVELPS----EKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSE 329
           K+ ++     +EL +    EKKD+   + A+ G  S +A+KD  + ++G+K K +
Sbjct: 222 KDSKKGKDSAIELQAVKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKK 276

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>TTRAP_BRARE (Q5XJA0) TRAF and TNF receptor-associated protein homolog|
          Length = 369

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -3

Query: 493 RAFLKECEQSLKKGVELPSEKKDDSVA-EKADDGKVSGEARKDDADAEQGEKRK 335
           + +L E E  +++ +    E   DSV  E+A+  +V+G  RKDD     G K+K
Sbjct: 27  QCYLAENEWDMERALNSFFEAHMDSVFDEEAEKTEVTGNKRKDDTAEASGTKKK 80

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>CR030_HUMAN (Q8N787) Protein C18orf30|
          Length = 583

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -3

Query: 442 PSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEE 326
           P E+K +  +EKA  G +  ++ + + D E+ E+ + EE
Sbjct: 150 PGEEKLEGYSEKAQKGDLGKDSEESEEDGEEEEESEEEE 188

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>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neurofilament|
           protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1090

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPS 302
           KE +  +K+  + P E K    A+   + K  GEA+        GE +   E  +   P 
Sbjct: 511 KETKSRVKEEAKSPGEAKSPGEAKSPAEAKSPGEAKSPGEAKSPGEAKSPAEPKSPAEPK 570

Query: 301 EVKKAK 284
              +AK
Sbjct: 571 SPAEAK 576

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>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150)|
            (DAP-150) (p150-glued) (p135)
          Length = 1278

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
 Frame = -3

Query: 502  DDVRAFLKECEQSLK-KGVELPS--------EKKDDSVAEKADDGKVSGEARKDDADAEQ 350
            +D    +KE ++SLK KG EL          EKK DS A+ AD+     + R ++  A  
Sbjct: 946  EDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALL 1005

Query: 349  GEKRKSEEIGAGTRPSEVKKAKVSLAHL 266
             +K K  E       +++ + +   A L
Sbjct: 1006 RKKEKEFEETMDALQADIDQLEAEKAEL 1033

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>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide) (DP-150)|
            (DAP-150) (p150-glued)
          Length = 1281

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
 Frame = -3

Query: 502  DDVRAFLKECEQSLK-KGVELPS--------EKKDDSVAEKADDGKVSGEARKDDADAEQ 350
            +D    +KE ++SLK KG EL          EKK DS A+ AD+     + R D+     
Sbjct: 946  EDRETVIKELKKSLKIKGEELSEANVRXSLLEKKLDSAAKDADERIEKVQTRLDETQTLL 1005

Query: 349  GEKRKSEEIGAGTRPSEVKKAKVSLAHL 266
             +K K  E       +++ + +   A L
Sbjct: 1006 RKKEKDFEETMDALQADIDQLEAEKAEL 1033

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>Y382_RICPR (Q9ZDE9) Hypothetical protein RP382|
          Length = 510

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = +1

Query: 10  LFLRGSLVNYHQQDINYLIKTQYYY*STRIQIACP----*TAKILTVVNIQKLPKEQRIT 177
           LFL G L+  +  DIN +I   Y+     I IAC      T   L   +I K  K+  IT
Sbjct: 366 LFLLGGLIAININDINLVIPAHYHGSIVGISIACMGYSYQTIIPLMDHDIHKTTKQYLIT 425

Query: 178 RHTSWHHQMAFSRQFDSIRLLHLL 249
              +W     +   F  I  LH+L
Sbjct: 426 LSINWIKFAIYLLTFGQI--LHIL 447

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>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)|
           (Chromatin assembly factor I p150 subunit) (CAF-I 150
           kDa subunit) (CAF-Ip150)
          Length = 938

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQG---EKRKSEE 326
           KE E+ LK+       +KD+   EKA+  ++  E RK+  +A +    EKRK EE
Sbjct: 357 KEEEKELKEKERREKREKDEK--EKAEKQRLKEERRKERQEALEAKLEEKRKKEE 409

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>IF2_TREDE (Q73NP6) Translation initiation factor IF-2|
          Length = 896

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 20/64 (31%), Positives = 26/64 (40%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPS 302
           K   QS K       EKK D   E+        E +K DA + Q EKR  +      + +
Sbjct: 73  KASSQSSKPAEASVKEKKPDERLEETKKTAPRFEDKKSDAPSAQNEKRSFDSAKKEEKQT 132

Query: 301 EVKK 290
           E KK
Sbjct: 133 ERKK 136

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>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
          Length = 925

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = -3

Query: 484 LKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGA 317
           LKE E+  K+  E   E++++  A K+D  +  G  ++  ++ E+GE+ +  E  A
Sbjct: 521 LKE-EEGEKEEEEGQEEEEEEEEAAKSDQAEEGGSEKEGSSEKEEGEQEEEGETEA 575

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>PINI_ARATH (Q9C6B8) Auxin efflux carrier component 1 (Protein PIN-FORMED)|
           (AtPIN1)
          Length = 622

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -3

Query: 424 DSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSEVKKAKV 281
           ++ AE  +DGK+    R+ +A       R+S+ + A  RPS +  A++
Sbjct: 191 ETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSATPRPSNLTNAEI 238

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>NSBP1_HUMAN (P82970) Nucleosome-binding protein 1|
          Length = 282

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 460 KKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSE 329
           K G E   + K+    +K +DGK +GE  K+  + E+ E+ + E
Sbjct: 161 KNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKE 204

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>NO27_SOYBN (P08864) Nodulin 27 precursor (N-27)|
          Length = 213

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 421 SVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSEVK 293
           +VAEKA +GK +    +D +D E     ++  IG    P+E K
Sbjct: 18  AVAEKAGNGKAANNPAEDASDGEHNLVEEAGGIGDAITPAEGK 60

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>IF2P_HUMAN (O60841) Eukaryotic translation initiation factor 5B (eIF-5B)|
           (Translation initiation factor IF-2)
          Length = 1220

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQS---LKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKR 338
           + +  R F +E  +S   +  GV   SE+K ++     DD +  G+ +K D   ++GEK 
Sbjct: 269 QKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNE--GDKKKKDKKKKKGEKE 326

Query: 337 KSE-EIGAGTRPSEVKKAKVSLAHL 266
           + E E   G   + VK  + +LA L
Sbjct: 327 EKEKEKKKGPSKATVKAMQEALAKL 351

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>AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member B (PHAPI2 protein) (Silver-stainable protein
           SSP29) (Acidic protein rich in leucines)
          Length = 251

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQ-----GE 344
           + DD     +E ++   +  ++  ++ DD V+E+ ++  +  E   +D D E+     GE
Sbjct: 179 DEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGE 238

Query: 343 KRKSE 329
           KRK E
Sbjct: 239 KRKRE 243

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>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
           (Neurofilament 3)
          Length = 915

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = -3

Query: 472 EQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSE-EIGAGTRPSEV 296
           E+  K+  E   E++++    K+D  +  G  ++  ++ E+GE+ + E E  A    +E 
Sbjct: 522 EEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEA 581

Query: 295 KKAK 284
           K+ K
Sbjct: 582 KEEK 585

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>CAF1A_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)|
           (Chromatin assembly factor I p150 subunit) (CAF-I 150
           kDa subunit) (CAF-Ip150)
          Length = 911

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQG---EKRKSEE 326
           KE E+ LK+       +KD+   EKA+  ++  E RK+  +A +    EKRK EE
Sbjct: 347 KEEEKELKEKERREKREKDEK--EKAEKQRLKEEKRKERQEALEAKLEEKRKKEE 399

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>CNG1_CHICK (Q90805) Cyclic nucleotide-gated channel, cone photoreceptor,|
           subunit alpha (CNG channel 1) (CNG-1)
          Length = 735

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -3

Query: 505 NDDVRAFLKECEQSLK--KGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEK 341
           N+D +   KE ++  K  K  E   EKKDD   +K DD       +KDD   E+ +K
Sbjct: 149 NEDKKEEKKEVKEEKKEEKKEEKKEEKKDDKKDDKKDD-------KKDDKKKEEQKK 198

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>ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked nuclear protein)
            (Heterochromatin protein 2) (HP1 alpha-interacting
            protein) (HP1-BP38 protein)
          Length = 2476

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -3

Query: 472  EQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSEVK 293
            E+  K+G E   E +D+   ++ DD K  G+ RK      + +K ++E   A     E +
Sbjct: 1430 EEDKKEGDEEDEEDEDEDEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERR 1489

Query: 292  K 290
            K
Sbjct: 1490 K 1490

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>LRC59_BRARE (Q6NWG1) Leucine-rich repeat-containing protein 59|
          Length = 314

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKD------DADAEQG 347
           E +  R  LKE EQ  KK  +   ++  +  A+K    +     RK+         A++ 
Sbjct: 154 EKELERRLLKEREQEKKKEAKQREKEAREKEAQKKKKAEEKERKRKEYQAQVAAVAAQEQ 213

Query: 346 EKRKSEE--------IGAGTRPSEVKKAKVSLAHL 266
           +K+K EE         G    P  V KAK S+  L
Sbjct: 214 QKKKKEEKKKKAAQNQGKKAAPESVPKAKRSICSL 248

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>T2FA_XENLA (Q04870) Transcription initiation factor IIF alpha subunit (EC|
           2.7.11.1) (TFIIF-alpha) (Transcription initiation factor
           RAP74)
          Length = 524

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -3

Query: 457 KGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSEVKKAK 284
           KG +    K DD   E +DDG   G+    + D    E    EE+     P ++K AK
Sbjct: 250 KGGKKKKRKSDDEALEDSDDGDFEGQ----EVDYMSDESSSDEEL-----PGKIKPAK 298

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>MCLN2_HUMAN (Q8IZK6) Mucolipin-2|
          Length = 538

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEK 431
           EN+D R  LK C+Q  KKG   PS +
Sbjct: 125 ENEDNRIGLKVCKQHYKKGTMFPSNE 150

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>CBF5_YEAST (P33322) H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-)|
           (Centromere/microtubule-binding protein CBF5)
           (Centromere-binding factor 5) (Small nucleolar RNP
           protein CBF5) (H/ACA snoRNP protein CBF5) (p64')
          Length = 483

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSE--KKDDSVAEKAD-----DGKVSGEARKDDADAEQGEKRKSEEI 323
           K  E SL K VE   E  K+DDS  EK +     + K   E +      E+ EK++  E 
Sbjct: 411 KAKEDSLIKEVETEKEEVKEDDSKKEKKEKKDKKEKKEKKEKKDKKEKKEKKEKKRKSED 470

Query: 322 GAGTRPSEVKKAKVS 278
           G     SE KK+K S
Sbjct: 471 G----DSEEKKSKKS 481

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>AATF_HUMAN (Q9NY61) Protein AATF (Apoptosis-antagonizing transcription factor)|
           (Rb-binding protein Che-1)
          Length = 560

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 427 DDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSE 299
           DD  + + ++ + SG    DDA+  QGE   SEE  AG R SE
Sbjct: 165 DDLGSSEEEEDEESGMEEGDDAEDSQGE---SEEDRAGDRNSE 204

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>PHSL_VICFA (P53536) Alpha-1,4 glucan phosphorylase, L isozyme, chloroplast|
           precursor (EC 2.4.1.1) (Starch phosphorylase L)
          Length = 1003

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 15/77 (19%)
 Frame = -3

Query: 472 EQSLKKGVELPSEKKD---------DSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIG 320
           E  + + VELP+E  D         D  +E+    K  GE  +++   E GE+ + +E+G
Sbjct: 499 EMRILENVELPAEFADILVKTKEATDISSEEVQISKEGGE--EEETSKEGGEEEEEKEVG 556

Query: 319 AGT------RPSEVKKA 287
            G       +  EV+KA
Sbjct: 557 GGREEGDDGKEDEVEKA 573

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>MP62_LYTPI (P91753) Mitotic apparatus protein p62|
          Length = 411

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
 Frame = -3

Query: 508 ENDDVRAFLKECEQSLKKGVELPSEKKDDSVAEKADDGKVS-------GEARKDDADAE- 353
           E++D +   +E E+    G E   E++D+   E+ DD +++        +  +DD D E 
Sbjct: 253 EDEDYKVGDEEEEEEATSGEE---EEEDEEEEEEEDDEEMALGDDDDEDDDEEDDEDEEG 309

Query: 352 -QGEKRKSEEIGAGTRPSEVKKAKVS 278
              E  + EE  +  +P++  K KV+
Sbjct: 310 MDDEDEEEEEDSSPVKPAKKAKGKVN 335

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>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)|
           (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar
           and coiled-body phosphoprotein 1)
          Length = 704

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = -3

Query: 481 KECEQSLKKGVELPSEKKDDSVAEKADDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPS 302
           +E ++   K    P   K + V   + +GK   E+ +++ D EQ +K       AGT+P 
Sbjct: 534 EEKKKPKSKATPKPQAGKANGVPA-SQNGKAGKESEEEEEDTEQNKK------AAGTKPG 586

Query: 301 EVKKAK 284
             KK K
Sbjct: 587 SGKKRK 592

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>HANG_DROME (Q9VXG1) Zinc finger protein hangover|
          Length = 1959

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
 Frame = -3

Query: 448  ELPSEKKDDSVAEKA--------DDGKVSGEARKDDADAEQGEKRKSEEIGAGTRPSEVK 293
            +L   + DD + E+         DDG+V  +   +D D E+ +  + E +G   RP    
Sbjct: 1711 DLNLNQDDDDLVEEVISSDDDEDDDGEVESDDDDEDDDDEEDDVEEPEPVGLTVRPLMNG 1770

Query: 292  KAKV 281
            K+K+
Sbjct: 1771 KSKM 1774

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>MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)|
          Length = 1875

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -3

Query: 499  DVRAFLKECEQSLKKGVELPSEKKDDSVAEK 407
            +V   ++E E++LKK + LP+E+K + + E+
Sbjct: 1516 EVSQKIREAEEALKKRIRLPTEEKINKIIER 1546


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,702,440
Number of Sequences: 219361
Number of extensions: 988078
Number of successful extensions: 4449
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 4133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4414
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result