ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart40d01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197929.1| Oryza sativa (japonica cultivar-group) putative ankyrin protein (OSJNBa0056G17.5), mRNA Length = 993 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 417 acagaatcatccttcttctcagatggtagctccactcccttcttcagtgactgctcgcac 476 |||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| || Sbjct: 596 acagaatcatccttcttctccgatggaagctcacctcccttcttcaatgactgctcacat 537 Query: 477 tctttcaggaaagcacgcacgtcatcattctc 508 |||||||||||| |||| || ||||| ||||| Sbjct: 536 tctttcaggaaatcacgaacatcatccttctc 505
>dbj|AB110173.1| Oryza sativa (japonica cultivar-group) mRNA for ankyrin, complete cds, clone: 13YPB030 Length = 1035 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 417 acagaatcatccttcttctcagatggtagctccactcccttcttcagtgactgctcgcac 476 |||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| || Sbjct: 667 acagaatcatccttcttctccgatggaagctcacctcccttcttcaatgactgctcacat 608 Query: 477 tctttcaggaaagcacgcacgtcatcattctc 508 |||||||||||| |||| || ||||| ||||| Sbjct: 607 tctttcaggaaatcacgaacatcatccttctc 576
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 417 acagaatcatccttcttctcagatggtagctccactcccttcttcagtgactgctcgcac 476 |||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| || Sbjct: 123386 acagaatcatccttcttctccgatggaagctcacctcccttcttcaatgactgctcacat 123327 Query: 477 tctttcaggaaagcacgcacgtcatcattctc 508 |||||||||||| |||| || ||||| ||||| Sbjct: 123326 tctttcaggaaatcacgaacatcatccttctc 123295
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 417 acagaatcatccttcttctcagatggtagctccactcccttcttcagtgactgctcgcac 476 |||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| || Sbjct: 22668717 acagaatcatccttcttctccgatggaagctcacctcccttcttcaatgactgctcacat 22668658 Query: 477 tctttcaggaaagcacgcacgtcatcattctc 508 |||||||||||| |||| || ||||| ||||| Sbjct: 22668657 tctttcaggaaatcacgaacatcatccttctc 22668626
>dbj|AK071604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099C19, full insert sequence Length = 1026 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 417 acagaatcatccttcttctcagatggtagctccactcccttcttcagtgactgctcgcac 476 |||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| || Sbjct: 654 acagaatcatccttcttctccgatggaagctcacctcccttcttcaatgactgctcacat 595 Query: 477 tctttcaggaaagcacgcacgtcatcattctc 508 |||||||||||| |||| || ||||| ||||| Sbjct: 594 tctttcaggaaatcacgaacatcatccttctc 563
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 417 acagaatcatccttcttctcagatggtagctccactcccttcttcagtgactgctcgcac 476 |||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| || Sbjct: 22681185 acagaatcatccttcttctccgatggaagctcacctcccttcttcaatgactgctcacat 22681126 Query: 477 tctttcaggaaagcacgcacgtcatcattctc 508 |||||||||||| |||| || ||||| ||||| Sbjct: 22681125 tctttcaggaaatcacgaacatcatccttctc 22681094
>gb|AY111430.1| Zea mays CL65354_1 mRNA sequence Length = 588 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 431 cttctcagatggtagctccactcccttcttcagtgactgctcgcactctttcaggaaagc 490 |||||| ||||||||||| | |||||||||| || ||||||||||| |||||||| || Sbjct: 347 cttctccgatggtagctcggcacccttcttcaaggattgctcgcactccttcaggaacgc 406 Query: 491 acgcacgtcatcat 504 |||||| ||||||| Sbjct: 407 acgcacttcatcat 420
>ref|XM_459159.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D16929g) partial mRNA Length = 3630 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 230 ttcgtctgcttcatcttcttcttccatgtc 259 ||||||| ||||| |||||||||||||||| Sbjct: 2616 ttcgtcttcttcaccttcttcttccatgtc 2587
>ref|XM_538194.2| PREDICTED: Canis familiaris similar to high-mobility group box 3 (LOC481073), mRNA Length = 1046 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 230 ttcgtctgcttcatcttcttcttcca 255 ||||||| |||||||||||||||||| Sbjct: 575 ttcgtcttcttcatcttcttcttcca 550
>emb|AL359455.22| Human DNA sequence from clone RP11-444K11 on chromosome 9 Contains part of the RGS3 gene for the regulator of G-protein signalling 3 (C2PA, RGP3, FLJ20370, PDZ-RGS3), complete sequence Length = 85763 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 atcaacaagacatcaactacct 62 |||||||||||||||||||||| Sbjct: 79348 atcaacaagacatcaactacct 79327
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 230 ttcgtctgcttcatcttcttcttccatgtc 259 ||||||| ||||| |||||||||||||||| Sbjct: 1304887 ttcgtcttcttcaccttcttcttccatgtc 1304858
>gb|AC084768.4| Homo sapiens chromosome 8, clone RP11-281H11, complete sequence Length = 173677 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 401 atcagccttctcagctacagaa 422 |||||||||||||||||||||| Sbjct: 36649 atcagccttctcagctacagaa 36628
>gb|AC004944.1|AC004944 Homo sapiens PAC clone RP5-991O23 from 8, complete sequence Length = 133258 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 401 atcagccttctcagctacagaa 422 |||||||||||||||||||||| Sbjct: 125507 atcagccttctcagctacagaa 125486
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 tcgtctgcttcatcttcttctt 252 |||||||||||||||||||||| Sbjct: 158207 tcgtctgcttcatcttcttctt 158186
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 tcgtctgcttcatcttcttctt 252 |||||||||||||||||||||| Sbjct: 388397 tcgtctgcttcatcttcttctt 388376 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 231 tcgtctgcttcatcttcttctt 252 |||||||||||||||||||||| Sbjct: 228297 tcgtctgcttcatcttcttctt 228318
>ref|XM_523899.1| PREDICTED: Pan troglodytes desmoglein 1 (LOC468510), mRNA Length = 1914 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 tggcaccatcaaatggcattc 210 ||||||||||||||||||||| Sbjct: 312 tggcaccatcaaatggcattc 332
>ref|XM_454855.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E20075g predicted mRNA Length = 1317 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ttcgtctgcttcatcttcttc 250 ||||||||||||||||||||| Sbjct: 1269 ttcgtctgcttcatcttcttc 1249
>gb|DQ017411.1| Drosophila melanogaster strain Russian 2b CG10488 gene, promoter region and partial cds Length = 1657 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 attcgtctgcttcatcttcttcttc 253 ||||||||||||| ||||||||||| Sbjct: 872 attcgtctgcttcttcttcttcttc 896
>gb|DQ017410.1| Drosophila melanogaster strain Oregon R CG10488 gene, promoter region and partial cds Length = 1663 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 attcgtctgcttcatcttcttcttc 253 ||||||||||||| ||||||||||| Sbjct: 878 attcgtctgcttcttcttcttcttc 902
>ref|NM_001942.1| Homo sapiens desmoglein 1 (DSG1), mRNA Length = 4512 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 tggcaccatcaaatggcattc 210 ||||||||||||||||||||| Sbjct: 321 tggcaccatcaaatggcattc 341
>emb|AL390115.18| Human DNA sequence from clone RP11-479J7 on chromosome 1 Contains a novel gene and the 3' end of a novel gene, complete sequence Length = 102533 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tctcctcactcttcctcttct 345 ||||||||||||||||||||| Sbjct: 45550 tctcctcactcttcctcttct 45570
>emb|X56654.1|HSDGIGLY Human DSG1 mRNA for desmoglein type 1 Length = 3750 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 tggcaccatcaaatggcattc 210 ||||||||||||||||||||| Sbjct: 185 tggcaccatcaaatggcattc 205
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 ttcgtctgcttcatcttcttc 250 ||||||||||||||||||||| Sbjct: 1779247 ttcgtctgcttcatcttcttc 1779267 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ttcgtctgcttcatcttcttcttc 253 ||||||| |||||||||||||||| Sbjct: 511861 ttcgtcttcttcatcttcttcttc 511884
>gb|AC009717.15| Homo sapiens chromosome 18, clone RP11-534N16, complete sequence Length = 184717 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 tggcaccatcaaatggcattc 210 ||||||||||||||||||||| Sbjct: 47269 tggcaccatcaaatggcattc 47249
>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167344 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 attcgtctgcttcatcttcttcttc 253 ||||||||||||| ||||||||||| Sbjct: 146181 attcgtctgcttcttcttcttcttc 146157
>gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, complete sequence Length = 183066 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 tggcaccatcaaatggcattc 210 ||||||||||||||||||||| Sbjct: 182771 tggcaccatcaaatggcattc 182751
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170988 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 attcgtctgcttcatcttcttcttc 253 ||||||||||||| ||||||||||| Sbjct: 37067 attcgtctgcttcttcttcttcttc 37043
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 221 tcgattctattcgtctgcttcatcttcttcttc 253 |||||||| ||| ||| |||||||||||||||| Sbjct: 105252 tcgattctcttcttcttcttcatcttcttcttc 105220
>gb|AY706311.1| Gibberella zeae type I polyketide synthase (PKS12) gene, complete cds Length = 7342 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 atcatcaacaagacatcaact 58 ||||||||||||||||||||| Sbjct: 4479 atcatcaacaagacatcaact 4499
>gb|AC018632.1|AC018632 Genomic Sequence For Arabidopsis thaliana Clone F3F24, Chromosome V, complete sequence Length = 151828 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 221 tcgattctattcgtctgcttcatcttcttcttc 253 |||||||| ||| ||| |||||||||||||||| Sbjct: 130497 tcgattctcttcttcttcttcatcttcttcttc 130529
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 attcgtctgcttcatcttcttcttc 253 ||||||||||||| ||||||||||| Sbjct: 157219 attcgtctgcttcttcttcttcttc 157195
>gb|AF097935.1|AF097935 Homo sapiens desmoglein 1 (DSG1) mRNA, complete cds Length = 4512 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 tggcaccatcaaatggcattc 210 ||||||||||||||||||||| Sbjct: 321 tggcaccatcaaatggcattc 341
>ref|NM_101156.2| Arabidopsis thaliana catalytic AT1G12850 mRNA, complete cds Length = 1568 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 139 tctgcttcatcttcttcttc 120 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 97 tctgcttcatcttcttcttc 78
>ref|NM_126094.2| Arabidopsis thaliana unknown protein AT5G66950 mRNA, complete cds Length = 2814 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tcatcttcttcttccatgtc 259 |||||||||||||||||||| Sbjct: 206 tcatcttcttcttccatgtc 187
>ref|XM_629214.1| Dictyostelium discoideum developmental protein (DDB0220119), partial mRNA Length = 6132 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 aaattatcatcaacaagacatcaa 56 |||||||||||||||| ||||||| Sbjct: 3724 aaattatcatcaacaaaacatcaa 3747
>gb|AC168153.2| Mus musculus chromosome 18, clone wi1-1640H20, complete sequence Length = 40183 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 22888 ctacagaatcatccttctcctcag 22865
>gb|AC162520.7| Mus musculus chromosome 5, clone RP24-118C7, complete sequence Length = 187196 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 17341 ctacagaatcatccttctcctcag 17318
>gb|AC123599.6| Mus musculus chromosome 5, clone RP23-231D13, complete sequence Length = 191607 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 tacagttgtgaacattcaaaaatt 155 |||| ||||||||||||||||||| Sbjct: 43411 tacatttgtgaacattcaaaaatt 43434
>gb|AC102688.10| Mus musculus chromosome 5, clone RP24-138J15, complete sequence Length = 166655 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 tacagttgtgaacattcaaaaatt 155 |||| ||||||||||||||||||| Sbjct: 146552 tacatttgtgaacattcaaaaatt 146575
>ref|XM_454204.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E05676g predicted mRNA Length = 1209 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 ttcgtctgcttcatcttcttcttc 253 ||||||| |||||||||||||||| Sbjct: 684 ttcgtcttcttcatcttcttcttc 661
>gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, complete sequence Length = 262581 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ttcgtctgcttcatcttcttcttc 253 ||||||| |||||||||||||||| Sbjct: 109524 ttcgtcttcttcatcttcttcttc 109547
>ref|NM_001032576.1| Takifugu rubripes tropomyosin4-1 (TPM4-1), mRNA Length = 885 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cgtctgcttcatcttcttct 251 |||||||||||||||||||| Sbjct: 182 cgtctgcttcatcttcttct 163
>gb|AC125088.4| Mus musculus BAC clone RP24-152J3 from chromosome 12, complete sequence Length = 149712 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 60987 ctacagaatcatccttctcctcag 60964
>gb|AC107759.18| Mus musculus chromosome 5, clone RP23-193N17, complete sequence Length = 262970 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 216102 ctacagaatcatccttctcctcag 216079
>gb|AC125488.3| Mus musculus BAC clone RP23-75M24 from 12, complete sequence Length = 183202 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 62982 ctacagaatcatccttctcctcag 63005
>gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, complete sequence Length = 212273 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 93816 ctacagaatcatccttctcctcag 93839
>emb|CR718070.2|CNS0GH0C Tetraodon nigroviridis full-length cDNA Length = 595 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cgtctgcttcatcttcttct 251 |||||||||||||||||||| Sbjct: 186 cgtctgcttcatcttcttct 167
>ref|XM_719994.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04750) partial mRNA Length = 4569 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 ttcgtctgcttcatcttcttcttc 253 ||||||| |||||||||||||||| Sbjct: 1758 ttcgtcttcttcatcttcttcttc 1735
>gb|AC107819.8| Mus musculus chromosome 9, clone RP23-158E1, complete sequence Length = 172309 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 4932 ctacagaatcatccttctcctcag 4955
>emb|CR679013.2|CNS0FMVL Tetraodon nigroviridis full-length cDNA Length = 1070 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 322 caatctcctcactcttcctcttctcgcc 349 |||||||||| |||||||||||| |||| Sbjct: 543 caatctcctctctcttcctcttcacgcc 516
>gb|AY379532.1| Brassica rapa cultivar Tsoi-sim constans-like protein gene, partial cds Length = 705 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 221 tctgcttcatcttcttcttc 202
>gb|AY379531.1| Brassica rapa cultivar Pachuca constans-like protein gene, partial cds Length = 705 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 221 tctgcttcatcttcttcttc 202
>emb|AL136976.11| Human DNA sequence from clone RP3-474I3 on chromosome 6 Contains part of the novel gene for KIAA1116, complete sequence Length = 55012 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aaaattcttacagttgtgaa 143 |||||||||||||||||||| Sbjct: 39045 aaaattcttacagttgtgaa 39026
>ref|XM_966628.1| PREDICTED: Tribolium castaneum similar to CG15828-PB, isoform B (LOC660397), mRNA Length = 12360 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tcattagtaaattatcatca 44 |||||||||||||||||||| Sbjct: 11078 tcattagtaaattatcatca 11097
>emb|BX018165.1|CNS08M6H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA27BH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 299 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ttcgtctgcttcatcttcttcttc 253 |||||||||||| ||||||||||| Sbjct: 47 ttcgtctgcttcttcttcttcttc 70
>gb|BT000158.1| Arabidopsis thaliana Unknown protein (At5g66950) mRNA, complete cds Length = 1471 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tcatcttcttcttccatgtc 259 |||||||||||||||||||| Sbjct: 85 tcatcttcttcttccatgtc 66
>gb|AF510489.1| Brassica nigra isolate 173ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510488.1| Brassica nigra isolate 176ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510487.1| Brassica nigra isolate 179ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510486.1| Brassica nigra isolate 180ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510485.1| Brassica nigra isolate 182ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510484.1| Brassica nigra isolate 183ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510483.1| Brassica nigra isolate 185ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510482.1| Brassica nigra isolate 186ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510481.1| Brassica nigra isolate 54GE COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510480.1| Brassica nigra isolate 64GE COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510479.1| Brassica nigra isolate 68GE COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510478.1| Brassica nigra isolate 69GE COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510477.1| Brassica nigra isolate 70GE COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510476.1| Brassica nigra isolate 71GE COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510475.1| Brassica nigra isolate 72GE COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510474.1| Brassica nigra isolate 272SI COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510473.1| Brassica nigra isolate 273SI COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510472.1| Brassica nigra isolate 274SI COL1 protein (COL1) gene, complete cds Length = 1288 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510471.1| Brassica nigra isolate 275SI COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510470.1| Brassica nigra isolate S1PO COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510469.1| Brassica nigra isolate 260SI COL1 protein (COL1) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510468.1| Brassica nigra isolate S105SP COL1 protein (COL1) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510467.1| Brassica nigra isolate S110SP COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510466.1| Brassica nigra isolate S13PO COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510465.1| Brassica nigra isolate S158GE COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510464.1| Brassica nigra isolate S170GE COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510463.1| Brassica nigra isolate S209ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510462.1| Brassica nigra isolate S210ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510461.1| Brassica nigra isolate S215ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510460.1| Brassica nigra isolate S216ET COL1 protein (COL1) gene, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 636 tctgcttcatcttcttcttc 617
>gb|AF510459.1| Brassica nigra isolate S6PO COL1 protein (COL1) gene, complete cds Length = 1284 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 641 tctgcttcatcttcttcttc 622
>gb|AF510458.1| Brassica nigra isolate S60SM COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510457.1| Brassica nigra isolate S67SM COL1 protein (COL1) gene, complete cds Length = 1284 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 641 tctgcttcatcttcttcttc 622
>gb|AF510456.1| Brassica nigra isolate 258SI COL1 protein (COL1) gene, complete cds Length = 1282 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510455.1| Brassica nigra isolate 24SPA COL1 protein (COL1) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510454.1| Brassica nigra isolate S182GE COL1 protein (COL1) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510453.1| Brassica nigra isolate 27SPA COL1 protein (COL1) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510452.1| Brassica nigra isolate S53SM COL1 protein (COL1) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510451.1| Brassica nigra isolate 83GE COL1 protein (COL1) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510450.1| Brassica nigra isolate 38SPA COL1 protein (COL1) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>gb|AF510449.1| Brassica nigra isolate S178GE COL1 protein (COL1) gene, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 639 tctgcttcatcttcttcttc 620
>emb|CR931743.1| Medicago truncatula chromosome 5 clone mth2-4c23, COMPLETE SEQUENCE Length = 109311 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 96271 tctgcttcatcttcttcttc 96290
>gb|AC154634.2| Mus musculus BAC clone RP23-298D14 from chromosome 14, complete sequence Length = 218356 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 414 gctacagaatcatccttcttctca 437 ||||||||||||| |||||||||| Sbjct: 36851 gctacagaatcattcttcttctca 36874
>gb|AY113075.1| Arabidopsis thaliana At1g12850/F13K23_8 mRNA, complete cds Length = 1218 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 104 tctgcttcatcttcttcttc 85 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 62 tctgcttcatcttcttcttc 43
>gb|AC090239.6| Homo sapiens chromosome 18, clone RP11-746A20, complete sequence Length = 184635 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 acagatagcatgcccatgaa 118 |||||||||||||||||||| Sbjct: 65525 acagatagcatgcccatgaa 65506
>gb|AC087683.5| Homo sapiens chromosome 18, clone RP11-687E1, complete sequence Length = 181036 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 acagatagcatgcccatgaa 118 |||||||||||||||||||| Sbjct: 19693 acagatagcatgcccatgaa 19712
>gb|AY054528.1| Arabidopsis thaliana Unknown protein (At5g66950; K8A10.2) mRNA, complete cds Length = 2330 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tcatcttcttcttccatgtc 259 |||||||||||||||||||| Sbjct: 651 tcatcttcttcttccatgtc 632
>emb|CR361553.4| Mouse DNA sequence from clone RP24-456I14 on chromosome X, complete sequence Length = 52670 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ctacagaatcatccttcttctcag 438 ||||||||||| |||||||||||| Sbjct: 8220 ctacagaatcacccttcttctcag 8197
>gb|AC154336.2| Mus musculus BAC clone RP23-252B13 from chromosome 9, complete sequence Length = 184358 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 123669 ctacagaatcatccttctcctcag 123646
>gb|AC010543.9| Homo sapiens chromosome 16 clone RP11-440K14, complete sequence Length = 180286 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 agcatgcccatgaacagcca 124 |||||||||||||||||||| Sbjct: 31475 agcatgcccatgaacagcca 31456
>gb|AC158999.2| Mus musculus BAC clone RP24-201N16 from chromosome 9, complete sequence Length = 169860 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 168749 ctacagaatcatccttctcctcag 168772
>gb|AY039522.1| Arabidopsis thaliana At1g12850/F13K23_8 mRNA, complete cds Length = 1538 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 133 tctgcttcatcttcttcttc 114 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 91 tctgcttcatcttcttcttc 72
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaattatcatcaacaagaca 52 |||||||||||||||||||| Sbjct: 4401550 aaattatcatcaacaagaca 4401531
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aagaacaacggataacacgg 180 |||||||||||||||||||| Sbjct: 11649949 aagaacaacggataacacgg 11649968
>emb|BX815622.1|CNS0ACSQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1460 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 89 tctgcttcatcttcttcttc 70 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 46 tctgcttcatcttcttcttc 27
>emb|BX815193.1|CNS0ACTF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 135 tctgcttcatcttcttcttc 116 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 93 tctgcttcatcttcttcttc 74
>emb|BX816585.1|CNS0AAP9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1483 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 114 tctgcttcatcttcttcttc 95 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 72 tctgcttcatcttcttcttc 53
>gb|AY016010.1| Apteryx mantelli mitochondrion, partial genome Length = 12269 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agccttctcagctacagaat 423 |||||||||||||||||||| Sbjct: 8025 agccttctcagctacagaat 8044
>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence Length = 217844 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 ttcgtctgcttcatcttcttcttc 253 ||||||| |||||||||||||||| Sbjct: 67879 ttcgtcttcttcatcttcttcttc 67856
>gb|AF269128.1|AF269128 Brassica nigra constans-like protein gene, complete cds Length = 1387 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 693 tctgcttcatcttcttcttc 674
>gb|AY909515.1| Siniperca chuatsi clone C333 tropomyosin4-1 mRNA, partial cds Length = 230 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cgtctgcttcatcttcttct 251 |||||||||||||||||||| Sbjct: 101 cgtctgcttcatcttcttct 82
>gb|AY086037.1| Arabidopsis thaliana clone 207684 mRNA, complete sequence Length = 1537 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 133 tctgcttcatcttcttcttc 114 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 91 tctgcttcatcttcttcttc 72
>gb|AC142113.2| Mus musculus BAC clone RP23-444K20 from chromosome 9, complete sequence Length = 188724 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tttcaggaaagcacgcacgt 498 |||||||||||||||||||| Sbjct: 89752 tttcaggaaagcacgcacgt 89733
>gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 74328 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 28334 tctgcttcatcttcttcttc 28353 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 28292 tctgcttcatcttcttcttc 28311
>emb|AL672169.13| Mouse DNA sequence from clone RP23-357I18 on chromosome X, complete sequence Length = 217552 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 152339 ctacagaatcatccttctcctcag 152362
>gb|AC012147.7|AC012147 Mus musculus, clone RP23-191A4, complete sequence Length = 217034 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 155633 ctacagaatcatccttctcctcag 155656
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1279D09 Length = 134793 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 aaattatcatcaacaagaca 52 |||||||||||||||||||| Sbjct: 104368 aaattatcatcaacaagaca 104349
>dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0680C01 Length = 145580 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aagaacaacggataacacgg 180 |||||||||||||||||||| Sbjct: 8108 aagaacaacggataacacgg 8127
>dbj|AB090369.1| Takifugu rubripes TPM4-1 mRNA for tropomyosin4-1, complete cds, spliced variant:exon 1a, 2b, 3, 4, 5, 6b, 7, 8 and 9a Length = 885 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cgtctgcttcatcttcttct 251 |||||||||||||||||||| Sbjct: 182 cgtctgcttcatcttcttct 163
>dbj|AB026640.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8A10 Length = 31132 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tcatcttcttcttccatgtc 259 |||||||||||||||||||| Sbjct: 6166 tcatcttcttcttccatgtc 6147
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gtctgcttcatcttcttctt 252 |||||||||||||||||||| Sbjct: 5753794 gtctgcttcatcttcttctt 5753775
>gb|AY280868.2| Brassica napus putative beta-glucan elicitor receptor (Bger1), constans-like protein (CoL), and constans (Coa1) genes, complete cds Length = 18604 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 18256 tctgcttcatcttcttcttc 18237 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tctgcttcatcttcttcttc 253 |||||||||||||||||||| Sbjct: 11242 tctgcttcatcttcttcttc 11223
>gb|AC151971.3| Mus musculus BAC clone RP24-282C4 from 9, complete sequence Length = 179607 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 tttcaggaaagcacgcacgt 498 |||||||||||||||||||| Sbjct: 8207 tttcaggaaagcacgcacgt 8226
>gb|AC109255.10| Mus musculus chromosome 16, clone RP23-359P19, complete sequence Length = 206967 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 17427 ctacagaatcatccttctcctcag 17450
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gtctgcttcatcttcttctt 252 |||||||||||||||||||| Sbjct: 6036414 gtctgcttcatcttcttctt 6036395
>gb|AF081801.1|AF081801 Dictyostelium discoideum developmental protein DG1098 (DG1098) gene, partial cds Length = 3625 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 aaattatcatcaacaagacatcaa 56 |||||||||||||||| ||||||| Sbjct: 545 aaattatcatcaacaaaacatcaa 568
>emb|AL772305.15| Mouse DNA sequence from clone RP23-86E8 on chromosome 4, complete sequence Length = 260935 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 caattcgattctattcgtctgctt 240 |||||| ||||||||||||||||| Sbjct: 170912 caattctattctattcgtctgctt 170935
>gb|AC136021.5| Mus musculus BAC clone RP24-473P10 from 9, complete sequence Length = 171139 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 159925 ctacagaatcatccttctcctcag 159948
>gb|AC147718.1| Gallus gallus BAC clone CH261-18A20 from chromosome unknown, complete sequence Length = 185989 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 aactacctgataaaaacacagtac 78 |||||||| ||||||||||||||| Sbjct: 134596 aactacctaataaaaacacagtac 134619
>gb|AC137515.3| Mus musculus BAC clone RP23-258C20 from 1, complete sequence Length = 215582 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 ttcgtctgcttcatcttcttcttc 253 ||||||| |||||||||||||||| Sbjct: 24529 ttcgtcttcttcatcttcttcttc 24506
>emb|AL772342.12| Mouse DNA sequence from clone RP23-105D19 on chromosome 2, complete sequence Length = 206806 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ctacagaatcatccttcttctcag 438 |||||||||||||||||| ||||| Sbjct: 143873 ctacagaatcatccttctcctcag 143896
>gb|AY644680.1| Phlebotomus papatasi midgut chitinase mRNA, complete cds Length = 1578 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 ctcactcttcctcttctcgc 348 |||||||||||||||||||| Sbjct: 1008 ctcactcttcctcttctcgc 989 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,255,255 Number of Sequences: 3902068 Number of extensions: 6255255 Number of successful extensions: 128914 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128462 Number of HSP's gapped (non-prelim): 452 length of query: 510 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 488 effective length of database: 17,147,199,772 effective search space: 8367833488736 effective search space used: 8367833488736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
