ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 7e-72
2gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome... 46 0.047
3gb|AC119432.7| Mus musculus chromosome 18, clone RP24-114K9, com... 46 0.047
4emb|BX088709.6| Zebrafish DNA sequence from clone CH211-15J21 in... 46 0.047
5gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, comple... 46 0.047
6gb|AC129942.7| Mus musculus chromosome 8, clone RP23-267A22, com... 44 0.19
7emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018 44 0.19
8gb|AC157789.5| Mus musculus chromosome 8, clone RP24-95E2, compl... 44 0.19
9gb|AC091861.3| Homo sapiens chromosome 5 clone CTD-2339B8, compl... 44 0.19
10gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, compl... 44 0.19
11gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosom... 44 0.19
12gb|AC005406.2| Homo sapiens clone b128f11, complete sequence 44 0.19
13gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Canc... 44 0.19
14dbj|BS000045.1| Pan troglodytes chromosome 22 clone:RP43-179P23,... 44 0.19
15dbj|AP001537.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 44 0.19
16emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, comple... 42 0.74
17gb|AC004907.3| Homo sapiens PAC clone RP5-853H20 from 7, complet... 42 0.74
18emb|AL137248.21| Human DNA sequence from clone RP11-316G23 on ch... 42 0.74
19emb|BX640588.5| Zebrafish DNA sequence from clone DKEY-110L7 in ... 42 0.74
20emb|BX119974.5| Zebrafish DNA sequence from clone DKEY-237J17 in... 42 0.74
21ref|NM_063535.1| Caenorhabditis elegans T24B8.4 (T24B8.4) mRNA, ... 42 0.74
22gb|AC114804.5| Homo sapiens BAC clone RP11-1181A2 from 2, comple... 42 0.74
23gb|AC067962.6| Homo sapiens BAC clone RP11-48K7 from 2, complete... 42 0.74
24emb|AL929204.7| Zebrafish DNA sequence from clone CH211-138E4, c... 42 0.74
25emb|AL845499.9| Mouse DNA sequence from clone RP23-232A21 on chr... 42 0.74
26gb|AC160127.2| Mus musculus BAC clone RP23-295O2 from chromosome... 40 2.9
27gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome... 40 2.9
28gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, com... 40 2.9
29gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, comple... 40 2.9
30emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJ... 40 2.9
31emb|AL663099.7| Mouse DNA sequence from clone DN-384L23 on chrom... 40 2.9
32gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, comp... 40 2.9
33ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA 40 2.9
34gb|AC104656.3| Homo sapiens BAC clone RP11-547J14 from 4, comple... 40 2.9
35gb|AY728087.1| Taricha granulosa ORL1-like opioid receptor mRNA,... 40 2.9
36gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, r... 40 2.9
37ref|NG_002199.1| Homo sapiens olfactory receptor, family 51, sub... 40 2.9
38dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
39gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r... 40 2.9
40gb|AC092964.8| Homo sapiens 3 BAC RP11-423E7 (Roswell Park Cance... 40 2.9
41dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
42dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
43gb|AC167701.2| Reniera sp. JGI-2005 clone JGIBAYC-9B8, complete ... 40 2.9
44emb|CR954167.21| Zebrafish DNA sequence from clone CH211-122N14 ... 40 2.9
45gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 2.9
46gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, compl... 40 2.9
47emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chro... 40 2.9
48emb|AL606750.13| Mouse DNA sequence from clone RP23-335A19 on ch... 40 2.9
49emb|X81445.2|HSHPFH6 Homo spaiens HPFH6OR gene for olfactory rec... 40 2.9 
>dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A09, full
            insert sequence
          Length = 1094

 Score =  278 bits (140), Expect = 7e-72
 Identities = 146/148 (98%)
 Strand = Plus / Minus

                                                                        
Query: 81   gcgcgaaattatattttcacgagcaaacatgtacacaaacaaacacaaggcttggattca 140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 gcgcgaaattatattttcacgagcaaacatgtacacaaacaaacacaaggcttggattca 1035

                                                                        
Query: 141  agggtagctacgagctagccatacactaacaaatggattccccaccaccaccaggaccag 200
            ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1034 aggctagctacgagctagccatacactaacaaatggattcgccaccaccaccaggaccag 975

                                        
Query: 201  gtacgcacaacgagctggagtgccctcg 228
            ||||||||||||||||||||||||||||
Sbjct: 974  gtacgcacaacgagctggagtgccctcg 947
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>gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome 8, complete sequence
          Length = 200605

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 105   aaacatgtacacaaacaaacaca 127
             |||||||||||||||||||||||
Sbjct: 87422 aaacatgtacacaaacaaacaca 87444
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>gb|AC119432.7| Mus musculus chromosome 18, clone RP24-114K9, complete sequence
          Length = 190138

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 170    caaatggattccccaccaccacc 192
              |||||||||||||||||||||||
Sbjct: 101043 caaatggattccccaccaccacc 101021
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>emb|BX088709.6| Zebrafish DNA sequence from clone CH211-15J21 in linkage group 15,
             complete sequence
          Length = 156236

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 105   aaacatgtacacaaacaaacaca 127
             |||||||||||||||||||||||
Sbjct: 99303 aaacatgtacacaaacaaacaca 99325
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>gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, complete sequence
          Length = 206312

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 105   aaacatgtacacaaacaaacaca 127
             |||||||||||||||||||||||
Sbjct: 42393 aaacatgtacacaaacaaacaca 42371
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>gb|AC129942.7| Mus musculus chromosome 8, clone RP23-267A22, complete sequence
          Length = 175030

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 102   agcaaacatgtacacaaacaaacaca 127
             |||| |||||||||||||||||||||
Sbjct: 83431 agcatacatgtacacaaacaaacaca 83456
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>emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 17     aaataagtaattactctaggga 38
              ||||||||||||||||||||||
Sbjct: 330114 aaataagtaattactctaggga 330135
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>gb|AC157789.5| Mus musculus chromosome 8, clone RP24-95E2, complete sequence
          Length = 203403

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 102    agcaaacatgtacacaaacaaacaca 127
              |||| |||||||||||||||||||||
Sbjct: 201634 agcatacatgtacacaaacaaacaca 201609
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>gb|AC091861.3| Homo sapiens chromosome 5 clone CTD-2339B8, complete sequence
          Length = 39248

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 106   aacatgtacacaaacaaacaca 127
             ||||||||||||||||||||||
Sbjct: 17617 aacatgtacacaaacaaacaca 17596
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>gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, complete sequence
          Length = 192731

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 106    aacatgtacacaaacaaacaca 127
              ||||||||||||||||||||||
Sbjct: 186935 aacatgtacacaaacaaacaca 186914
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>gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosome 8, complete sequence
          Length = 191336

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 102    agcaaacatgtacacaaacaaacaca 127
              |||| |||||||||||||||||||||
Sbjct: 181507 agcatacatgtacacaaacaaacaca 181532
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>gb|AC005406.2| Homo sapiens clone b128f11, complete sequence
          Length = 226345

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 106  aacatgtacacaaacaaacaca 127
            ||||||||||||||||||||||
Sbjct: 5791 aacatgtacacaaacaaacaca 5812
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>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203418

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 107   acatgtacacaaacaaacacaa 128
             ||||||||||||||||||||||
Sbjct: 65927 acatgtacacaaacaaacacaa 65906
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>dbj|BS000045.1| Pan troglodytes chromosome 22 clone:RP43-179P23, map 22, complete
              sequences
          Length = 179114

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 17     aaataagtaattactctaggga 38
              ||||||||||||||||||||||
Sbjct: 132703 aaataagtaattactctaggga 132724
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>dbj|AP001537.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B749F18,
             LL56-APP region, complete sequence
          Length = 81450

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 17    aaataagtaattactctaggga 38
             ||||||||||||||||||||||
Sbjct: 66415 aaataagtaattactctaggga 66436
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>emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, complete sequence
          Length = 38779

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   cccaccaccaccaggaccagg 201
             |||||||||||||||||||||
Sbjct: 19676 cccaccaccaccaggaccagg 19656
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>gb|AC004907.3| Homo sapiens PAC clone RP5-853H20 from 7, complete sequence
          Length = 130117

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   gtacacaaacaaacacaaggc 131
             |||||||||||||||||||||
Sbjct: 44784 gtacacaaacaaacacaaggc 44804
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>emb|AL137248.21| Human DNA sequence from clone RP11-316G23 on chromosome 13q12.1-12.3,
              complete sequence
          Length = 186343

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    atggattccccaccaccacca 193
              |||||||||||||||||||||
Sbjct: 167626 atggattccccaccaccacca 167606
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>emb|BX640588.5| Zebrafish DNA sequence from clone DKEY-110L7 in linkage group 6,
            complete sequence
          Length = 117506

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 4    ttcaactactttcaaataagtaatt 28
            |||||||| ||||||||||||||||
Sbjct: 6178 ttcaactaatttcaaataagtaatt 6154
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>emb|BX119974.5| Zebrafish DNA sequence from clone DKEY-237J17 in linkage group 6,
              complete sequence
          Length = 213058

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 4      ttcaactactttcaaataagtaatt 28
              |||||||| ||||||||||||||||
Sbjct: 125472 ttcaactaatttcaaataagtaatt 125448
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>ref|NM_063535.1| Caenorhabditis elegans T24B8.4 (T24B8.4) mRNA, complete cds
          Length = 2745

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 181 cccaccaccaccaggaccagg 201
           |||||||||||||||||||||
Sbjct: 285 cccaccaccaccaggaccagg 305
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>gb|AC114804.5| Homo sapiens BAC clone RP11-1181A2 from 2, complete sequence
          Length = 94984

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 attccccaccaccaccaggac 197
           |||||||||||||||||||||
Sbjct: 624 attccccaccaccaccaggac 644
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>gb|AC067962.6| Homo sapiens BAC clone RP11-48K7 from 2, complete sequence
          Length = 73565

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 177   attccccaccaccaccaggac 197
             |||||||||||||||||||||
Sbjct: 72189 attccccaccaccaccaggac 72209
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>emb|AL929204.7| Zebrafish DNA sequence from clone CH211-138E4, complete sequence
          Length = 157519

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   acatgtacacaaacaaacaca 127
             |||||||||||||||||||||
Sbjct: 25675 acatgtacacaaacaaacaca 25655
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>emb|AL845499.9| Mouse DNA sequence from clone RP23-232A21 on chromosome 2, complete
              sequence
          Length = 151923

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 105    aaacatgtacacaaacaaaca 125
              |||||||||||||||||||||
Sbjct: 123420 aaacatgtacacaaacaaaca 123440
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>gb|AC160127.2| Mus musculus BAC clone RP23-295O2 from chromosome 9, complete
            sequence
          Length = 205289

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 104  caaacatgtacacaaacaaacaca 127
            |||||||||||||| |||||||||
Sbjct: 3678 caaacatgtacacacacaaacaca 3701
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>gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome 17, complete sequence
          Length = 207537

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     tttgcaaatatgaaaattac 67
              ||||||||||||||||||||
Sbjct: 189983 tttgcaaatatgaaaattac 190002
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>gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, complete sequence
          Length = 205429

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    caaacatgtacacaaacaaacaca 127
              |||||||||||||| |||||||||
Sbjct: 170438 caaacatgtacacacacaaacaca 170461
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>gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, complete sequence
          Length = 149990

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tttgcaaatatgaaaattac 67
             ||||||||||||||||||||
Sbjct: 40695 tttgcaaatatgaaaattac 40714
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>emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJK genes)
          Length = 10622

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  accaccaccaggaccaggta 203
            ||||||||||||||||||||
Sbjct: 7564 accaccaccaggaccaggta 7545
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>emb|AL663099.7| Mouse DNA sequence from clone DN-384L23 on chromosome 3 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (GAPD)
             pseudogene, two novel genes (4930406D18RIK)
             (4930431B09Rik), the 5' end of a novel gene
             (E130019M14RIK) and a CpG island, complete sequence
          Length = 177135

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   tggattccccaccaccacca 193
             ||||||||||||||||||||
Sbjct: 85673 tggattccccaccaccacca 85654
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>gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, complete sequence
          Length = 160939

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     ttcaaataagtaattactct 33
              ||||||||||||||||||||
Sbjct: 122959 ttcaaataagtaattactct 122978
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>ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA
          Length = 4422

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  ccaccaccaccaggaccagg 201
            ||||||||||||||||||||
Sbjct: 1325 ccaccaccaccaggaccagg 1306
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>gb|AC104656.3| Homo sapiens BAC clone RP11-547J14 from 4, complete sequence
          Length = 175350

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     gctttgcaaatatgaaaatt 65
              ||||||||||||||||||||
Sbjct: 104796 gctttgcaaatatgaaaatt 104815
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>gb|AY728087.1| Taricha granulosa ORL1-like opioid receptor mRNA, complete cds
          Length = 1120

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 ccaccaccaccaggaccagg 201
           ||||||||||||||||||||
Sbjct: 808 ccaccaccaccaggaccagg 789
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>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone
              BACR27L16, complete sequence
          Length = 182623

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ccaccaccaccaggaccagg 201
              ||||||||||||||||||||
Sbjct: 147511 ccaccaccaccaggaccagg 147530
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>ref|NG_002199.1| Homo sapiens olfactory receptor, family 51, subfamily A, member 1
            pseudogene (OR51A1P) on chromosome 11
          Length = 1265

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   gctttgcaaatatgaaaatt 65
            ||||||||||||||||||||
Sbjct: 1034 gctttgcaaatatgaaaatt 1053
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 106      aacatgtacacaaacaaaca 125
                ||||||||||||||||||||
Sbjct: 13385155 aacatgtacacaaacaaaca 13385174
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>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
             BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ccaccaccaccaggaccagg 201
             ||||||||||||||||||||
Sbjct: 85991 ccaccaccaccaggaccagg 86010
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>gb|AC092964.8| Homo sapiens 3 BAC RP11-423E7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114995

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   atgtacacaaacaaacacaa 128
             ||||||||||||||||||||
Sbjct: 48454 atgtacacaaacaaacacaa 48435
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>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1123_B01
          Length = 105736

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   aacatgtacacaaacaaaca 125
             ||||||||||||||||||||
Sbjct: 99593 aacatgtacacaaacaaaca 99612
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>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0684A03
          Length = 64705

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   aacatgtacacaaacaaaca 125
             ||||||||||||||||||||
Sbjct: 10914 aacatgtacacaaacaaaca 10933
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>gb|AC167701.2| Reniera sp. JGI-2005 clone JGIBAYC-9B8, complete sequence
          Length = 41777

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    tactttcaaataagtaatta 29
             ||||||||||||||||||||
Sbjct: 38626 tactttcaaataagtaatta 38607
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>emb|CR954167.21| Zebrafish DNA sequence from clone CH211-122N14 in linkage group 8,
             complete sequence
          Length = 160594

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   atgtacacaaacaaacacaa 128
             ||||||||||||||||||||
Sbjct: 50940 atgtacacaaacaaacacaa 50921
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>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ccaccaccaccaggaccagg 201
              ||||||||||||||||||||
Sbjct: 191757 ccaccaccaccaggaccagg 191776
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>gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, complete sequence
          Length = 225134

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    atgtacacaaacaaacacaa 128
              ||||||||||||||||||||
Sbjct: 198967 atgtacacaaacaaacacaa 198986
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>emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chromosome X, complete
              sequence
          Length = 198175

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    caaacatgtacacaaacaaacaca 127
              |||||||| |||||||||||||||
Sbjct: 110773 caaacatgcacacaaacaaacaca 110796
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>emb|AL606750.13| Mouse DNA sequence from clone RP23-335A19 on chromosome 3, complete
              sequence
          Length = 207366

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    tggattccccaccaccacca 193
              ||||||||||||||||||||
Sbjct: 143314 tggattccccaccaccacca 143295
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>emb|X81445.2|HSHPFH6 Homo spaiens HPFH6OR gene for olfactory receptor
          Length = 3157

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   gctttgcaaatatgaaaatt 65
            ||||||||||||||||||||
Sbjct: 2452 gctttgcaaatatgaaaatt 2471


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,640,887
Number of Sequences: 3902068
Number of extensions: 3640887
Number of successful extensions: 81837
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81725
Number of HSP's gapped (non-prelim): 112
length of query: 228
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 206
effective length of database: 17,147,199,772
effective search space: 3532323153032
effective search space used: 3532323153032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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