Clone Name | rbart40c07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 278 bits (140), Expect = 2e-71 Identities = 202/222 (90%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 293 tattagttgaccttggtgcagacccgccggatctcgccgtcggagccggcgg---tcttg 349 ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| Sbjct: 28670202 tattagttgaccttggtgcagactcgccggatctcggcgtcggagccggcggccgtcttg 28670143 Query: 350 accccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctgg 409 || |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 28670142 acgccgacgcggccgagcttggtgatggcggcgacgaaggcgtcgaagaaggcggtctgg 28670083 Query: 410 ttggcggcgaagtggttgacggtagcccgggagcggcggtcggcgaagagcacctggtcg 469 ||||||||||||| ||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 28670082 ttggcggcgaagtagttgacggtggcgcgcgagcggcggtcggcgaagagcacctggtcg 28670023 Query: 470 gacgacagcaggcccttctgctgctgcagcgtctggtagtag 511 || | || |||||||| ||||||||||||||||| ||||| Sbjct: 28670022 gaggcgaggaggcccttgagctgctgcagcgtctggaagtag 28669981 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 361 gccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcg 418 ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 28643636 gccgagcttggtcatggcggcgacgaagtcgttgaagaaggcgccctggttggcggcg 28643693 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 361 gccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcg 418 ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 28639523 gccgagcttggtcatggcggcgacgaagtcgttgaagaaggcgccctggttggcggcg 28639466 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 362 ccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctgg 409 |||||| ||| |||||||||| ||||| || ||||||||||| ||||| Sbjct: 28654372 ccgagcctggtcatggcggcggcgaagccgccgaagaaggcgctctgg 28654325
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 278 bits (140), Expect = 2e-71 Identities = 202/222 (90%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 293 tattagttgaccttggtgcagacccgccggatctcgccgtcggagccggcgg---tcttg 349 ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| Sbjct: 70768 tattagttgaccttggtgcagactcgccggatctcggcgtcggagccggcggccgtcttg 70709 Query: 350 accccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctgg 409 || |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 70708 acgccgacgcggccgagcttggtgatggcggcgacgaaggcgtcgaagaaggcggtctgg 70649 Query: 410 ttggcggcgaagtggttgacggtagcccgggagcggcggtcggcgaagagcacctggtcg 469 ||||||||||||| ||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 70648 ttggcggcgaagtagttgacggtggcgcgcgagcggcggtcggcgaagagcacctggtcg 70589 Query: 470 gacgacagcaggcccttctgctgctgcagcgtctggtagtag 511 || | || |||||||| ||||||||||||||||| ||||| Sbjct: 70588 gaggcgaggaggcccttgagctgctgcagcgtctggaagtag 70547 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 361 gccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcg 418 ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 44202 gccgagcttggtcatggcggcgacgaagtcgttgaagaaggcgccctggttggcggcg 44259 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 361 gccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcg 418 ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 40089 gccgagcttggtcatggcggcgacgaagtcgttgaagaaggcgccctggttggcggcg 40032 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 362 ccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctgg 409 |||||| ||| |||||||||| ||||| || ||||||||||| ||||| Sbjct: 54938 ccgagcctggtcatggcggcggcgaagccgccgaagaaggcgctctgg 54891
>dbj|AK104754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F11, full insert sequence Length = 1523 Score = 278 bits (140), Expect = 2e-71 Identities = 202/222 (90%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 293 tattagttgaccttggtgcagacccgccggatctcgccgtcggagccggcgg---tcttg 349 ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| Sbjct: 1166 tattagttgaccttggtgcagactcgccggatctcggcgtcggagccggcggccgtcttg 1107 Query: 350 accccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctgg 409 || |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1106 acgccgacgcggccgagcttggtgatggcggcgacgaaggcgtcgaagaaggcggtctgg 1047 Query: 410 ttggcggcgaagtggttgacggtagcccgggagcggcggtcggcgaagagcacctggtcg 469 ||||||||||||| ||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 1046 ttggcggcgaagtagttgacggtggcgcgcgagcggcggtcggcgaagagcacctggtcg 987 Query: 470 gacgacagcaggcccttctgctgctgcagcgtctggtagtag 511 || | || |||||||| ||||||||||||||||| ||||| Sbjct: 986 gaggcgaggaggcccttgagctgctgcagcgtctggaagtag 945
>dbj|AK064918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M23, full insert sequence Length = 1618 Score = 278 bits (140), Expect = 2e-71 Identities = 202/222 (90%), Gaps = 3/222 (1%) Strand = Plus / Minus Query: 293 tattagttgaccttggtgcagacccgccggatctcgccgtcggagccggcgg---tcttg 349 ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| Sbjct: 1169 tattagttgaccttggtgcagactcgccggatctcggcgtcggagccggcggccgtcttg 1110 Query: 350 accccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctgg 409 || |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1109 acgccgacgcggccgagcttggtgatggcggcgacgaaggcgtcgaagaaggcggtctgg 1050 Query: 410 ttggcggcgaagtggttgacggtagcccgggagcggcggtcggcgaagagcacctggtcg 469 ||||||||||||| ||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 1049 ttggcggcgaagtagttgacggtggcgcgcgagcggcggtcggcgaagagcacctggtcg 990 Query: 470 gacgacagcaggcccttctgctgctgcagcgtctggtagtag 511 || | || |||||||| ||||||||||||||||| ||||| Sbjct: 989 gaggcgaggaggcccttgagctgctgcagcgtctggaagtag 948
>tpe|BN000619.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx90 gene for class III peroxidase 90 precursor, exons 1-4 Length = 2690 Score = 274 bits (138), Expect = 3e-70 Identities = 200/220 (90%), Gaps = 3/220 (1%) Strand = Plus / Minus Query: 295 ttagttgaccttggtgcagacccgccggatctcgccgtcggagccggcgg---tcttgac 351 ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| Sbjct: 2690 ttagttgaccttggtgcagactcgccggatctcggcgtcggagccggcggccgtcttgac 2631 Query: 352 cccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctggtt 411 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2630 gccgacgcggccgagcttggtgatggcggcgacgaaggcgtcgaagaaggcggtctggtt 2571 Query: 412 ggcggcgaagtggttgacggtagcccgggagcggcggtcggcgaagagcacctggtcgga 471 ||||||||||| ||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 2570 ggcggcgaagtagttgacggtggcgcgcgagcggcggtcggcgaagagcacctggtcgga 2511 Query: 472 cgacagcaggcccttctgctgctgcagcgtctggtagtag 511 | || |||||||| ||||||||||||||||| ||||| Sbjct: 2510 ggcgaggaggcccttgagctgctgcagcgtctggaagtag 2471
>ref|XM_474177.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1014 Score = 180 bits (91), Expect = 3e-42 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Minus Query: 307 ggtgcagacccgccggatctcgccgtcggagccggcggtcttgaccccgatgcggccgag 366 ||||||||| || |||||||||||||||||||||| ||||||| ||||| | |||||| Sbjct: 1002 ggtgcagacgcggcggatctcgccgtcggagccgg---tcttgacgccgatcctgccgag 946 Query: 367 cttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcgaagtggtt 426 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 945 cttggccatggcggcgacgaaggcgtcgaagaaggcggtggagttggcggcgaagaggtt 886 Query: 427 gacggtagcccgggagcggcggtcggcgaagagcacctggtcgga 471 |||||| | |||||||||||||||| |||||| | ||||||||| Sbjct: 885 gacggtggggcgggagcggcggtcggtgaagaggatctggtcgga 841
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 180 bits (91), Expect = 3e-42 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 307 ggtgcagacccgccggatctcgccgtcggagccggcggtcttgaccccgatgcggccgag 366 ||||||||| || |||||||||||||||||||||| ||||||| ||||| | |||||| Sbjct: 33534033 ggtgcagacgcggcggatctcgccgtcggagccgg---tcttgacgccgatcctgccgag 33534089 Query: 367 cttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcgaagtggtt 426 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 33534090 cttggccatggcggcgacgaaggcgtcgaagaaggcggtggagttggcggcgaagaggtt 33534149 Query: 427 gacggtagcccgggagcggcggtcggcgaagagcacctggtcgga 471 |||||| | |||||||||||||||| |||||| | ||||||||| Sbjct: 33534150 gacggtggggcgggagcggcggtcggtgaagaggatctggtcgga 33534194 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 gagcttggccatggcggcgacgaa 387 ||||||||||||||||||| |||| Sbjct: 2269073 gagcttggccatggcggcggcgaa 2269096
>emb|AL442117.1|H0421H08 Oryza sativa genomic DNA, chromosome X, BAC clone: H0421H08, complete sequence Length = 55574 Score = 180 bits (91), Expect = 3e-42 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 307 ggtgcagacccgccggatctcgccgtcggagccggcggtcttgaccccgatgcggccgag 366 ||||||||| || |||||||||||||||||||||| ||||||| ||||| | |||||| Sbjct: 47568 ggtgcagacgcggcggatctcgccgtcggagccgg---tcttgacgccgatcctgccgag 47624 Query: 367 cttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcgaagtggtt 426 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 47625 cttggccatggcggcgacgaaggcgtcgaagaaggcggtggagttggcggcgaagaggtt 47684 Query: 427 gacggtagcccgggagcggcggtcggcgaagagcacctggtcgga 471 |||||| | |||||||||||||||| |||||| | ||||||||| Sbjct: 47685 gacggtggggcgggagcggcggtcggtgaagaggatctggtcgga 47729
>dbj|AK058886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C06, full insert sequence Length = 1316 Score = 180 bits (91), Expect = 3e-42 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Minus Query: 307 ggtgcagacccgccggatctcgccgtcggagccggcggtcttgaccccgatgcggccgag 366 ||||||||| || |||||||||||||||||||||| ||||||| ||||| | |||||| Sbjct: 1084 ggtgcagacgcggcggatctcgccgtcggagccgg---tcttgacgccgatcctgccgag 1028 Query: 367 cttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcgaagtggtt 426 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 1027 cttggccatggcggcgacgaaggcgtcgaagaaggcggtggagttggcggcgaagaggtt 968 Query: 427 gacggtagcccgggagcggcggtcggcgaagagcacctggtcgga 471 |||||| | |||||||||||||||| |||||| | ||||||||| Sbjct: 967 gacggtggggcgggagcggcggtcggtgaagaggatctggtcgga 923
>tpe|BN000587.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx58 gene for class III peroxidase 58 precursor, exons 1-4 Length = 5790 Score = 180 bits (91), Expect = 3e-42 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Minus Query: 307 ggtgcagacccgccggatctcgccgtcggagccggcggtcttgaccccgatgcggccgag 366 ||||||||| || |||||||||||||||||||||| ||||||| ||||| | |||||| Sbjct: 5778 ggtgcagacgcggcggatctcgccgtcggagccgg---tcttgacgccgatcctgccgag 5722 Query: 367 cttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcgaagtggtt 426 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 5721 cttggccatggcggcgacgaaggcgtcgaagaaggcggtggagttggcggcgaagaggtt 5662 Query: 427 gacggtagcccgggagcggcggtcggcgaagagcacctggtcgga 471 |||||| | |||||||||||||||| |||||| | ||||||||| Sbjct: 5661 gacggtggggcgggagcggcggtcggtgaagaggatctggtcgga 5617
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 180 bits (91), Expect = 3e-42 Identities = 147/165 (89%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 307 ggtgcagacccgccggatctcgccgtcggagccggcggtcttgaccccgatgcggccgag 366 ||||||||| || |||||||||||||||||||||| ||||||| ||||| | |||||| Sbjct: 110322 ggtgcagacgcggcggatctcgccgtcggagccgg---tcttgacgccgatcctgccgag 110378 Query: 367 cttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcgaagtggtt 426 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 110379 cttggccatggcggcgacgaaggcgtcgaagaaggcggtggagttggcggcgaagaggtt 110438 Query: 427 gacggtagcccgggagcggcggtcggcgaagagcacctggtcgga 471 |||||| | |||||||||||||||| |||||| | ||||||||| Sbjct: 110439 gacggtggggcgggagcggcggtcggtgaagaggatctggtcgga 110483
>gb|AY104176.1| Zea mays PCO083783 mRNA sequence Length = 1312 Score = 155 bits (78), Expect = 2e-34 Identities = 155/180 (86%), Gaps = 3/180 (1%) Strand = Plus / Minus Query: 307 ggtgcagacccgccggatctcgccgtcggagccggcggtcttgaccccgatgcggccgag 366 ||||||||| || || ||||||||||||| ||||| |||||| ||||| | |||||| Sbjct: 1088 ggtgcagacgcggcgtatctcgccgtcggcgccgg---tcttgaggccgatcctgccgag 1032 Query: 367 cttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcgaagtggtt 426 ||||||||||||||||||||| || ||| |||||||||| ||||||||||||| |||| Sbjct: 1031 cttggccatggcggcgacgaatgcctcgtagaaggcggtggcgttggcggcgaagaggtt 972 Query: 427 gacggtagcccgggagcggcggtcggcgaagagcacctggtcggacgacagcaggccctt 486 |||||| | |||||||||||||||| |||||||||||||||||| | ||||||||||| Sbjct: 971 gacggtgggtcgggagcggcggtcggtgaagagcacctggtcggaggcgagcaggccctt 912
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 361 gccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcg 418 ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 135114 gccgagcttggtcatggcggcgacgaagtcgttgaagaaggcgccctggttggcggcg 135171 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 361 gccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcg 418 ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 131001 gccgagcttggtcatggcggcgacgaagtcgttgaagaaggcgccctggttggcggcg 130944 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 362 ccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctgg 409 |||||| ||| |||||||||| ||||| || ||||||||||| ||||| Sbjct: 145850 ccgagcctggtcatggcggcggcgaagccgccgaagaaggcgctctgg 145803
>tpe|BN000622.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx93 gene for class III peroxidase 93 precursor, exons 1-3 Length = 1489 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 361 gccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcg 418 ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 1423 gccgagcttggtcatggcggcgacgaagtcgttgaagaaggcgccctggttggcggcg 1366
>tpe|BN000621.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx92 gene for class III peroxidase 92 precursor, exons 1-3 Length = 1183 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 361 gccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctggttggcggcg 418 ||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 1117 gccgagcttggtcatggcggcgacgaagtcgttgaagaaggcgccctggttggcggcg 1060
>ref|XM_469868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1342 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcg 391 |||||||||| |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 990 cggtcttgacgccgacgcggccgaggttggtcatggcggcgacgaaggcg 941
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcg 391 |||||||||| |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 31229251 cggtcttgacgccgacgcggccgaggttggtcatggcggcgacgaaggcg 31229202 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 337 gccggcggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggc 390 |||| ||| ||||||||||| ||||||||||||| | |||||| || ||||||| Sbjct: 31224044 gccgccggacttgaccccgacgcggccgagcttgacgatggcgtcggcgaaggc 31223991 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 atgatatattgatattagttga 302 |||||||||||||||||||||| Sbjct: 17791083 atgatatattgatattagttga 17791104
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcg 391 |||||||||| |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 36492 cggtcttgacgccgacgcggccgaggttggtcatggcggcgacgaaggcg 36443 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 337 gccggcggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggc 390 |||| ||| ||||||||||| ||||||||||||| | |||||| || ||||||| Sbjct: 31285 gccgccggacttgaccccgacgcggccgagcttgacgatggcgtcggcgaaggc 31232
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcg 391 |||||||||| |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 31319767 cggtcttgacgccgacgcggccgaggttggtcatggcggcgacgaaggcg 31319718 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 337 gccggcggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggc 390 |||| ||| ||||||||||| ||||||||||||| | |||||| || ||||||| Sbjct: 31314560 gccgccggacttgaccccgacgcggccgagcttgacgatggcgtcggcgaaggc 31314507 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 atgatatattgatattagttga 302 |||||||||||||||||||||| Sbjct: 17784624 atgatatattgatattagttga 17784645
>dbj|AK071181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I20, full insert sequence Length = 1366 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcg 391 |||||||||| |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 1037 cggtcttgacgccgacgcggccgaggttggtcatggcggcgacgaaggcg 988
>tpe|BN000580.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx51 gene for class III peroxidase 51 precursor, exons 1-4 Length = 2300 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcg 391 |||||||||| |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 2253 cggtcttgacgccgacgcggccgaggttggtcatggcggcgacgaaggcg 2204
>ref|XM_483499.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1345 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 383 acgaaggcgtcgaagaaggcggtctggttggcggcgaa 420 |||||||| ||||||||||||||||||||| ||||||| Sbjct: 991 acgaaggcatcgaagaaggcggtctggttgacggcgaa 954
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 383 acgaaggcgtcgaagaaggcggtctggttggcggcgaa 420 |||||||| ||||||||||||||||||||| ||||||| Sbjct: 26540100 acgaaggcatcgaagaaggcggtctggttgacggcgaa 26540137
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 383 acgaaggcgtcgaagaaggcggtctggttggcggcgaa 420 |||||||| ||||||||||||||||||||| ||||||| Sbjct: 88967 acgaaggcatcgaagaaggcggtctggttgacggcgaa 89004
>dbj|AK119370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-H09, full insert sequence Length = 2945 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 383 acgaaggcgtcgaagaaggcggtctggttggcggcgaa 420 |||||||| ||||||||||||||||||||| ||||||| Sbjct: 1198 acgaaggcatcgaagaaggcggtctggttgacggcgaa 1235
>dbj|AK073978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N21, full insert sequence Length = 1345 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 383 acgaaggcgtcgaagaaggcggtctggttggcggcgaa 420 |||||||| ||||||||||||||||||||| ||||||| Sbjct: 991 acgaaggcatcgaagaaggcggtctggttgacggcgaa 954
>tpe|BN000648.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx119 gene for class III peroxidase 119 precursor, exons 1-3 Length = 2477 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 383 acgaaggcgtcgaagaaggcggtctggttggcggcgaa 420 |||||||| ||||||||||||||||||||| ||||||| Sbjct: 2389 acgaaggcatcgaagaaggcggtctggttgacggcgaa 2352
>ref|XM_469867.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1206 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 337 gccggcggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggc 390 |||| ||| ||||||||||| ||||||||||||| | |||||| || ||||||| Sbjct: 942 gccgccggacttgaccccgacgcggccgagcttgacgatggcgtcggcgaaggc 889
>dbj|AK107203.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-B06, full insert sequence Length = 1468 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 337 gccggcggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggc 390 |||| ||| ||||||||||| ||||||||||||| | |||||| || ||||||| Sbjct: 104 gccgccggacttgaccccgacgcggccgagcttgacgatggcgtcggcgaaggc 157
>dbj|AK104448.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-H10, full insert sequence Length = 1230 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 337 gccggcggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggc 390 |||| ||| ||||||||||| ||||||||||||| | |||||| || ||||||| Sbjct: 966 gccgccggacttgaccccgacgcggccgagcttgacgatggcgtcggcgaaggc 913
>dbj|AK060007.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C05, full insert sequence Length = 1234 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 337 gccggcggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggc 390 |||| ||| ||||||||||| ||||||||||||| | |||||| || ||||||| Sbjct: 970 gccgccggacttgaccccgacgcggccgagcttgacgatggcgtcggcgaaggc 917
>dbj|AK058884.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C04, full insert sequence Length = 1104 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 337 gccggcggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggc 390 |||| ||| ||||||||||| ||||||||||||| | |||||| || ||||||| Sbjct: 822 gccgccggacttgaccccgacgcggccgagcttgacgatggcgtcggcgaaggc 769
>tpe|BN000579.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx50 gene for class III peroxidase 50 precursor, exons 1-4 Length = 1252 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 337 gccggcggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggc 390 |||| ||| ||||||||||| ||||||||||||| | |||||| || ||||||| Sbjct: 1213 gccgccggacttgaccccgacgcggccgagcttgacgatggcgtcggcgaaggc 1160
>dbj|AK073198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022I15, full insert sequence Length = 1234 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 362 ccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctgg 409 |||||| ||| |||||||||| ||||| || ||||||||||| ||||| Sbjct: 1077 ccgagcctggtcatggcggcggcgaagccgccgaagaaggcgctctgg 1030
>tpe|BN000620.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx91 gene for class III peroxidase 91 precursor, exons 1-5 Length = 2224 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 362 ccgagcttggccatggcggcgacgaaggcgtcgaagaaggcggtctgg 409 |||||| ||| |||||||||| ||||| || ||||||||||| ||||| Sbjct: 2157 ccgagcctggtcatggcggcggcgaagccgccgaagaaggcgctctgg 2110
>gb|L07554.1|LINPEROX Linum usitatissimum peroxidase (FLXPER1) mRNA, complete cds Length = 1268 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 394 gaagaaggcggtctggttggcggcgaa 420 ||||||||| ||||||||||||||||| Sbjct: 945 gaagaaggccgtctggttggcggcgaa 919
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 atgatatattgatattagttga 302 |||||||||||||||||||||| Sbjct: 101032 atgatatattgatattagttga 101011
>gb|AF109386.2|AF109386 Streptomyces sp. 2065 protocatechuaic acid catabolic gene cluster, complete sequence Length = 6551 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 364 gagcttggccatggcggcgacgaaggcgtc 393 |||||||||||||||||||| | ||||||| Sbjct: 2163 gagcttggccatggcggcgagggaggcgtc 2134
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 480 ggcccttctgctgctgcagcgtctgg 505 |||||||||||||||||||| ||||| Sbjct: 1751009 ggcccttctgctgctgcagcttctgg 1751034
>gb|AY111409.1| Zea mays CL6947_1 mRNA sequence Length = 490 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Plus Query: 377 gcggcgacgaaggcgtcgaagaaggcggtctggttggcggcg 418 |||||| ||||| | |||||||||||||| ||||||||||| Sbjct: 250 gcggcggcgaagtcctcgaagaaggcggtgcggttggcggcg 291
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 tggcggcgacgaaggcgtcga 395 ||||||||||||||||||||| Sbjct: 872126 tggcggcgacgaaggcgtcga 872106
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 gagcttggccatggcggcgacgaag 388 ||||||||||||||||||| ||||| Sbjct: 62197 gagcttggccatggcggcggcgaag 62173
>emb|AL583830.7| Human DNA sequence from clone RP11-172L10 on chromosome 1 Contains the 5' end of a variant of the KCNK2 gene for potassium channel subfamily K member 2 and a translocase of inner mitochondrial membrane 17 homolog A (yeast) (TIMM17A) pseudogene, complete sequence Length = 151469 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 aagaataacttgatattcattcata 31 ||||||||||| ||||||||||||| Sbjct: 54919 aagaataacttaatattcattcata 54943
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 gagcttggccatggcggcgacgaag 388 ||||||||||||||||||| ||||| Sbjct: 1969320 gagcttggccatggcggcggcgaag 1969296
>gb|AE009678.1| Brucella melitensis 16M chromosome II, section 40 of 107 of the complete sequence Length = 12806 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 tggcggcgacgaaggcgtcga 395 ||||||||||||||||||||| Sbjct: 1717 tggcggcgacgaaggcgtcga 1737
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 tggcggcgacgaaggcgtcga 395 ||||||||||||||||||||| Sbjct: 344993 tggcggcgacgaaggcgtcga 345013
>dbj|AK102034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081B21, full insert sequence Length = 1312 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 gagcttggccatggcggcgacgaag 388 ||||||||||||||||||| ||||| Sbjct: 1033 gagcttggccatggcggcggcgaag 1009
>dbj|AK099362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048I06, full insert sequence Length = 1345 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 gagcttggccatggcggcgacgaag 388 ||||||||||||||||||| ||||| Sbjct: 1064 gagcttggccatggcggcggcgaag 1040
>tpe|BN000595.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx66 gene for class III peroxidase 66, exons 1-2 Length = 1925 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 gagcttggccatggcggcgacgaag 388 ||||||||||||||||||| ||||| Sbjct: 1850 gagcttggccatggcggcggcgaag 1826
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 tggcggcgacgaaggcgtcga 395 ||||||||||||||||||||| Sbjct: 345062 tggcggcgacgaaggcgtcga 345082
>ref|XM_471211.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1017 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 gagcttggccatggcggcgacgaa 387 ||||||||||||||||||| |||| Sbjct: 954 gagcttggccatggcggcggcgaa 931
>ref|XM_467718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1727 Score = 40.1 bits (20), Expect = 6.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaagg 401 |||||||||| |||| | ||| ||||||| | |||||| | |||| |||||||||||| Sbjct: 1369 cggtcttgacgccgaagaggctgagcttgtcgatggcgcgggagaagtcgtcgaagaagg 1310 Query: 402 cggt 405 |||| Sbjct: 1309 cggt 1306
>ref|NM_001025268.1| Canis familiaris receptor interacting protein kinase 5 (RIPK5), mRNA Length = 3323 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 373 gcggccgagcttggccctgccggcgacg 400
>gb|AC160545.8| Mus musculus chromosome 1, clone RP23-217K18, complete sequence Length = 240081 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 216857 gcggccgagcttggccctgccggcgacg 216884
>gb|AY429676.1| Mus musculus dusty protein kinase mRNA, complete cds Length = 6288 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 253 gcggccgagcttggccctgccggcgacg 280
>gb|BT018622.1| Zea mays clone EL01N0502C02.d mRNA sequence Length = 1473 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 gtcggcgaagagcacctggtcgga 471 ||||| |||||||||||||||||| Sbjct: 1052 gtcggagaagagcacctggtcgga 1029
>gb|AC150650.5| Bos taurus BAC CH240-447L3 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 148126 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 acatgtgtgagcatatggaattga 207 ||||||||| |||||||||||||| Sbjct: 18021 acatgtgtgtgcatatggaattga 18044
>ref|NM_172516.3| Mus musculus receptor interacting protein kinase 5 (Ripk5), mRNA Length = 6288 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 253 gcggccgagcttggccctgccggcgacg 280
>gb|AC124978.19| Mus musculus chromosome 5, clone RP24-107D19, complete sequence Length = 182405 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 atggcagctgcagctaccat 282 |||||||||||||||||||| Sbjct: 91464 atggcagctgcagctaccat 91445
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 cgccgtcggagccggcggtc 346 |||||||||||||||||||| Sbjct: 127198 cgccgtcggagccggcggtc 127179
>gb|AC107846.4| Mus musculus chromosome 1, clone RP23-309I23, complete sequence Length = 178870 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 99645 gcggccgagcttggccctgccggcgacg 99618
>gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosome 16, complete sequence Length = 203553 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ctttattacatggtgaagaaaaga 142 ||||||||||| |||||||||||| Sbjct: 19671 ctttattacattgtgaagaaaaga 19694
>gb|AY208852.1| Mus musculus dusty protein kinase mRNA, complete cds Length = 2784 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 214 gcggccgagcttggccctgccggcgacg 241
>gb|AC122276.4| Mus musculus BAC clone RP23-230D23 from 6, complete sequence Length = 169437 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 taccatgatatattgatatt 296 |||||||||||||||||||| Sbjct: 26568 taccatgatatattgatatt 26587
>gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete sequence Length = 146189 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aagaataacttgatattcat 26 |||||||||||||||||||| Sbjct: 67806 aagaataacttgatattcat 67825
>emb|AL136115.21| Human DNA sequence from clone RP4-534N18 on chromosome 1p34.2-35.3 Contains the PTP4A2 gene for tyrosine phosphatase type IVA, a novel gene and a CpG island, complete sequence Length = 118085 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 gatattcattcatagtatgggata 41 |||||||||| ||||||||||||| Sbjct: 39985 gatattcatttatagtatgggata 39962
>emb|X77515.1|RRNIFJ R.rubrum nifJ gene Length = 4049 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ggcggcgacgaaggcgtcga 395 |||||||||||||||||||| Sbjct: 1357 ggcggcgacgaaggcgtcga 1338
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cgacgaaggcgtcgaagaag 400 |||||||||||||||||||| Sbjct: 119195 cgacgaaggcgtcgaagaag 119214
>gb|AC162925.4| Mus musculus BAC clone RP23-302D18 from chromosome 6, complete sequence Length = 225947 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 taccatgatatattgatatt 296 |||||||||||||||||||| Sbjct: 71652 taccatgatatattgatatt 71633
>dbj|AP005827.1| Mus musculus genomic DNA, chromosome 16 clone:RP21-668B6, complete sequence Length = 214865 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 ctttattacatggtgaagaaaaga 142 ||||||||||| |||||||||||| Sbjct: 206200 ctttattacattgtgaagaaaaga 206177
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cggcgacgaaggcgtcgaag 397 |||||||||||||||||||| Sbjct: 4020628 cggcgacgaaggcgtcgaag 4020647
>dbj|AK132855.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930444A14 product:unclassifiable, full insert sequence Length = 1546 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 181 gcggccgagcttggccctgccggcgacg 154
>dbj|AK145449.1| Mus musculus 4 cells embryo 4 cells cDNA, RIKEN full-length enriched library, clone:I0C0046M14 product:HDCMD38P homolog [Mus musculus], full insert sequence Length = 2806 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 212 gcggccgagcttggccctgccggcgacg 239
>dbj|AK132119.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110070I12 product:Dusty protein kinase, full insert sequence Length = 3079 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 242 gcggccgagcttggccctgccggcgacg 269
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ggcggcgacgaaggcgtcga 395 |||||||||||||||||||| Sbjct: 2790291 ggcggcgacgaaggcgtcga 2790272
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ggcggcgacgaaggcgtcga 395 |||||||||||||||||||| Sbjct: 1046138 ggcggcgacgaaggcgtcga 1046119
>dbj|AK083696.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030068A09 product:Dusty protein kinase homolog [Homo sapiens], full insert sequence Length = 4614 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 265 gcggccgagcttggccctgccggcgacg 292
>dbj|AK020880.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930019K20 product:Dusty protein kinase homolog [Mus musculus], full insert sequence Length = 1188 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 253 gcggccgagcttggccctgccggcgacg 280
>gb|AY641093.1| Canis familiaris dusty protein kinase mRNA, complete cds Length = 3323 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 373 gcggccgagcttggccctgccggcgacg 400
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaagg 401 |||||||||| |||| | ||| ||||||| | |||||| | |||| |||||||||||| Sbjct: 31019770 cggtcttgacgccgaagaggctgagcttgtcgatggcgcgggagaagtcgtcgaagaagg 31019711 Query: 402 cggt 405 |||| Sbjct: 31019710 cggt 31019707
>gb|AC025097.41| Homo sapiens 12 BAC RP11-285E4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203530 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 gcaggcccttctgctgctgc 496 |||||||||||||||||||| Sbjct: 33459 gcaggcccttctgctgctgc 33440
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 40.1 bits (20), Expect = 6.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaagg 401 |||||||||| |||| | ||| ||||||| | |||||| | |||| |||||||||||| Sbjct: 74726 cggtcttgacgccgaagaggctgagcttgtcgatggcgcgggagaagtcgtcgaagaagg 74667 Query: 402 cggt 405 |||| Sbjct: 74666 cggt 74663
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 40.1 bits (20), Expect = 6.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaagg 401 |||||||||| |||| | ||| ||||||| | |||||| | |||| |||||||||||| Sbjct: 8994 cggtcttgacgccgaagaggctgagcttgtcgatggcgcgggagaagtcgtcgaagaagg 8935 Query: 402 cggt 405 |||| Sbjct: 8934 cggt 8931
>dbj|AK172954.1| Mus musculus mRNA for mKIAA0472 protein Length = 5185 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gcggccgagcttggccatggcggcgacg 385 |||||||||||||||| || |||||||| Sbjct: 214 gcggccgagcttggccctgccggcgacg 241
>dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092C13, full insert sequence Length = 1726 Score = 40.1 bits (20), Expect = 6.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaagg 401 |||||||||| |||| | ||| ||||||| | |||||| | |||| |||||||||||| Sbjct: 1368 cggtcttgacgccgaagaggctgagcttgtcgatggcgcgggagaagtcgtcgaagaagg 1309 Query: 402 cggt 405 |||| Sbjct: 1308 cggt 1305
>emb|CR352252.12| Zebrafish DNA sequence from clone CH211-181P13 in linkage group 22, complete sequence Length = 115241 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttgatattcattcatagtat 35 |||||||||||||||||||| Sbjct: 111681 ttgatattcattcatagtat 111662
>emb|CR854846.8| Zebrafish DNA sequence from clone DKEY-228N9 in linkage group 11, complete sequence Length = 202364 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 ctacatgctttattacatggtgaa 135 ||||||||| |||||||||||||| Sbjct: 42532 ctacatgctgtattacatggtgaa 42555
>tpe|BN000582.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx53 gene for class III peroxidase 53, exons 1-2 Length = 3118 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 gagcttggccatggcggcgacgaa 387 ||||||||||||||||||| |||| Sbjct: 3055 gagcttggccatggcggcggcgaa 3032
>tpe|BN000560.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx31 gene for class III peroxidase 31 precursor, exon 1 Length = 1353 Score = 40.1 bits (20), Expect = 6.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 342 cggtcttgaccccgatgcggccgagcttggccatggcggcgacgaaggcgtcgaagaagg 401 |||||||||| |||| | ||| ||||||| | |||||| | |||| |||||||||||| Sbjct: 1291 cggtcttgacgccgaagaggctgagcttgtcgatggcgcgggagaagtcgtcgaagaagg 1232 Query: 402 cggt 405 |||| Sbjct: 1231 cggt 1228
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cggcgacgaaggcgtcgaag 397 |||||||||||||||||||| Sbjct: 1053257 cggcgacgaaggcgtcgaag 1053276
>gb|DQ311665.1| Phenylobacterium lituiforme DNA gyrase subunit B (gyrB) gene, partial cds Length = 1275 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 cacctggtcggacgacagca 479 |||||||||||||||||||| Sbjct: 1150 cacctggtcggacgacagca 1131
>emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070D17, complete sequence Length = 163376 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 gagcttggccatggcggcgacgaa 387 ||||||||||||||||||| |||| Sbjct: 94080 gagcttggccatggcggcggcgaa 94103
>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence Length = 215189 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 atggcagctgcagctaccat 282 |||||||||||||||||||| Sbjct: 209721 atggcagctgcagctaccat 209702 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,942,032 Number of Sequences: 3902068 Number of extensions: 3942032 Number of successful extensions: 80054 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78863 Number of HSP's gapped (non-prelim): 1179 length of query: 511 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 488 effective length of database: 17,143,297,704 effective search space: 8365929279552 effective search space used: 8365929279552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)