>Y737_DROME (P83475) Hypothetical protein CG31737 in chromosome 2|
          Length = 263

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -3

Query: 418 GQRARPEDDRAGRATPFPRRHQCR--RGVPRPAPGSSPDQGGGLE 290
           G R  P     G     PRR+ C   RG P P     PD GGGL+
Sbjct: 190 GPRGYPGPGPRGYPGQGPRRYSCPGPRGYPGPGSSGRPDPGGGLQ 234

>IF2_MYCTU (P65131) Translation initiation factor IF-2|
          Length = 900

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -3

Query: 394 DRAGRATPFPRRHQCRRGVPRP--APGSSPDQGGG 296
           DR     P PR    R GVPRP  +PGS P + GG
Sbjct: 164 DRPIPRPPAPRPGTARPGVPRPGASPGSMPPRPGG 198

>IF2_MYCBO (P65132) Translation initiation factor IF-2|
          Length = 900

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -3

Query: 394 DRAGRATPFPRRHQCRRGVPRP--APGSSPDQGGG 296
           DR     P PR    R GVPRP  +PGS P + GG
Sbjct: 164 DRPIPRPPAPRPGTARPGVPRPGASPGSMPPRPGG 198

>SSB_PSEPK (Q88QK5) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 181

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 187 KGRRSSGYIYDHGGKNGGRVADQQRKLQPARLQWQRPKE 71
           +G++  G  Y+ GG N G    QQ    P R Q QRP++
Sbjct: 116 QGQQQGGDPYNQGGGNYGGGQQQQYNQAPPRQQAQRPQQ 154

>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2158

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 442  EGGHEEEIGQRARPEDDRAGRATPF--PRRHQCRRGVPRPAPGSSPDQGGGLE 290
            E G +   G +  P   R  R      PR   CRRG+P   PG  P + G ++
Sbjct: 900  EAGRKPARGGQGPPPPRRENRTETRWGPRPGSCRRGIPPEEPGVPPRRAGPIK 952

>THIC_RHOPA (P61427) Thiamine biosynthesis protein thiC|
          Length = 666

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = -3

Query: 451 VRLEGGHEEEIGQRARPEDD----RAGRATPFPRRHQCRRGVPRPAPGSSPDQGGG 296
           V+  GG E+  G+  +PED+     A  A  F   HQ  RG+  P P       GG
Sbjct: 83  VKQRGGVEQYQGRDIKPEDNGNVGAAHAAKAFTAHHQPLRGLDSPPPRGEGSGVGG 138

>MYOB_DICDI (P34092) Myosin IB heavy chain|
          Length = 1111

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -3

Query: 415  QRARPEDDRAGRATPFPRRHQCRRGVPRPAP--GSSPDQGGG 296
            QR  P+  + G A P P+  Q     P  AP  G +P QG G
Sbjct: 965  QRPMPQPQQGGGARPMPQPQQGGGARPMGAPQQGGAPQQGAG 1006

>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
            light chain LC2]
          Length = 2774

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -3

Query: 442  EGGHEEEIGQRARPEDDRAGRATP-FPRRHQCRRGVPRPAPGSSP 311
            E G  E + ++ RP     GRA P  P R    RG   P PG  P
Sbjct: 2563 ESGRVERLREKGRPGRRAPGRAKPASPARRLDIRGKRSPTPGKGP 2607

>INCC1_ECOLI (Q52312) Protein incC|
          Length = 358

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
 Frame = -3

Query: 433 HEEEIGQRARPEDDRAGRATPFPRRHQCRRGVPRPAPG-----SSPDQGGGL 293
           HEE   +   P+  +         RH  RR    PAPG     +  DQGGG+
Sbjct: 5   HEETANRSPIPDGHQGAGDRAADHRHSARRAGRWPAPGGVCHFAGADQGGGV 56

>RB3GP_HUMAN (Q15042) Rab3 GTPase-activating protein catalytic subunit (RAB3|
            GTPase-activating protein 130 kDa subunit) (Rab3-GAP
            p130) (Rab3-GAP)
          Length = 980

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = -3

Query: 430  EEEIGQRARPEDDRAGRATPFP----RRHQCRRGVPRPAPGS 317
            EEE+ +   PE+ R    + FP    R    R  VPRPAP S
Sbjct: 910  EEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYS 951


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,233,701
Number of Sequences: 219361
Number of extensions: 1215625
Number of successful extensions: 3745
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3740
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)