Clone Information

BLAST Search Result

Clone Name	rbart40c02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor ...	165	7e-41
2	PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor ...	164	2e-40
3	PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3...	105	5e-23
4	PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC...	104	1e-22
5	PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC...	103	2e-22
6	PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4....	95	9e-20
7	PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 prec...	89	5e-18
8	PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (...	77	3e-14
9	PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (...	74	3e-13
10	PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25...	51	2e-06
11	PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25...	50	4e-06
12	PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25...	46	5e-05
13	PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25...	45	1e-04
14	PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25...	45	1e-04
15	PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25...	43	5e-04
16	PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC...	40	0.003
17	PSMA_METJA (Q60177) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	39	0.007
18	PSMA_PYRFU (Q8U0L6) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	38	0.013
19	PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	38	0.016
20	PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC...	37	0.021
21	PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC...	37	0.021
22	PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4....	36	0.048
23	PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	36	0.048
24	PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 prec...	36	0.048
25	PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3...	36	0.062
26	PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC...	36	0.062
27	PSA4_ORYSA (Q9LE92) Proteasome subunit alpha type 4 (EC 3.4.25.1...	35	0.081
28	PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4....	35	0.11
29	PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC...	35	0.14
30	PSB9_RAT (P28077) Proteasome subunit beta type 9 precursor (EC 3...	34	0.24
31	PSB9_HUMAN (P28065) Proteasome subunit beta type 9 precursor (EC...	34	0.24
32	UBP4_YEAST (P32571) Ubiquitin carboxyl-terminal hydrolase 4 (EC ...	33	0.31
33	PSMA_THEVO (Q97BZ8) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	33	0.40
34	PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	33	0.40
35	GPDA_HAEDU (Q7VNA0) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	32	0.69
36	PSB9_MUSMB (O35522) Proteasome subunit beta type 9 precursor (EC...	32	0.69
37	PSB9_MUSSI (O35524) Proteasome subunit beta type 9 precursor (EC...	32	1.2
38	PSB9_MUSPL (O35523) Proteasome subunit beta type 9 precursor (EC...	32	1.2
39	PSB9_MUSDU (O35521) Proteasome subunit beta type 9 precursor (EC...	32	1.2
40	PSB9_MOUSE (P28076) Proteasome subunit beta type 9 precursor (EC...	32	1.2
41	PSB9_SALSA (Q9DD33) Proteasome subunit beta type 9 precursor (EC...	30	3.4
42	LYAM2_RAT (P98105) E-selectin precursor (Endothelial leukocyte a...	30	3.4
43	PSMA_METMP (Q6M0L9) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	30	4.4
44	PSB9_ONCMY (Q9PT26) Proteasome subunit beta type 9 precursor (EC...	30	4.4
45	PSMA_THEK1 (O24733) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	30	4.4
46	PSMA_PYRKO (Q5JIU9) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	30	4.4
47	CSPG2_MOUSE (Q62059) Versican core protein precursor (Large fibr...	30	4.4
48	GPD_ASHGO (Q759G5) Glycerol-3-phosphate dehydrogenase [NAD+] (EC...	30	4.4
49	GPDA_BACHK (Q6HL50) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	29	5.8
50	GPDA_BACCZ (Q63DM7) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	29	5.8
51	GPDA_BACCR (Q81FR4) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	29	5.8
52	GPDA_BACC1 (P61737) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	29	5.8
53	GPDA_BACAN (Q81SW8) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	29	5.8
54	SRB15_CAEEL (O01509) Serpentine receptor class beta-15 (Protein ...	29	5.8
55	PSMA_THEAC (P25156) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	29	5.8
56	GPDA_METCA (Q604K1) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	29	5.8
57	APCE_CYACA (Q9TLS6) Phycobilisome linker polypeptide (Anchor pol...	29	5.8
58	GPDA_GLOVI (Q7NF59) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	29	5.8
59	PSMA_METTH (O26782) Proteasome alpha subunit (EC 3.4.25.1) (Mult...	29	5.8
60	Y199_DEIRA (Q9RXV7) UPF0133 protein DR0199	29	7.6
61	NXSA4_NAJSP (O57327) Alpha-neurotoxin NTX-4 precursor	29	7.6
62	GPDA_PASMU (Q9CL17) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	29	7.6
63	GPDA_SYMTH (Q67NS7) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	29	7.6
64	PSA5_ENTHI (Q94561) Proteasome subunit alpha type 5 (EC 3.4.25.1)	29	7.6
65	PIGT_HUMAN (Q969N2) GPI transamidase component PIG-T precursor (...	29	7.6
66	CYSZ_PASHA (P72205) Protein cysZ homolog (Fragment)	28	9.9
67	PSA7_SCHPO (Q10329) Probable proteasome subunit alpha type 7 (EC...	28	9.9
68	GPDA_CHLTE (Q8KG76) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	28	9.9
69	UBR1_CAEEL (P91133) Ubiquitin-protein ligase E3 component N-reco...	28	9.9
70	GPDA_DESPS (Q6AQJ3) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	28	9.9
71	GPDA_COREF (Q8FPR0) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	28	9.9

>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)|
           (Proteasome subunit beta type 2) (20S proteasome beta
           subunit B-1) (Proteasome component FA) (Proteasome
           component FB)
          Length = 273

 Score =  165 bits (417), Expect = 7e-41
 Identities = 87/114 (76%), Positives = 98/114 (85%), Gaps = 1/114 (0%)
 Frame = -1

Query: 487 LPFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG 308
           LPFATMGSGSLAAMSVFE KY+EGLTR+EGI LVAE+I +GIFNDLGSGSNVD+CVITKG
Sbjct: 161 LPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKG 220

Query: 307 NTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLKPEVAD-GDAMEE 149
           N EYLRN+  PNPRT+VSSKGYSF K  TEVL TKIT L  + E+ + G+AMEE
Sbjct: 221 NKEYLRNYMEPNPRTYVSSKGYSFTK-KTEVLLTKITPLLERVEITEVGEAMEE 273

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>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)|
           (Proteasome subunit beta type 2) (20S proteasome beta
           subunit B-2) (Proteasome component FC)
          Length = 274

 Score =  164 bits (414), Expect = 2e-40
 Identities = 87/115 (75%), Positives = 98/115 (85%), Gaps = 2/115 (1%)
 Frame = -1

Query: 487 LPFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG 308
           LPFATMGSGSLAAMSVFE KY+EGLTR+EGI LVAEAI +GIFNDLGSGSNVD+CVITKG
Sbjct: 161 LPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITKG 220

Query: 307 NTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLKPEVAD--GDAMEE 149
           + EYLRN+  PNPRT+VSSKGYSF K  TEVL TKIT L  + E+ +  G+AMEE
Sbjct: 221 HKEYLRNYMEPNPRTYVSSKGYSFTK-KTEVLLTKITPLLERVEIVEVAGEAMEE 274

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>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)|
           (Proteasome subunit Z) (Macropain chain Z)
           (Multicatalytic endopeptidase complex chain Z)
          Length = 277

 Score =  105 bits (263), Expect = 5e-23
 Identities = 55/102 (53%), Positives = 73/102 (71%)
 Frame = -1

Query: 487 LPFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG 308
           LP+ TMGSGSLAAM+VFE K+R  +  EE   LV+EAI AGIFNDLGSGSN+D+CVI+K 
Sbjct: 165 LPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKS 224

Query: 307 NTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLK 182
             ++LR + +PN +     + Y   KG T VL+ K+T L+L+
Sbjct: 225 KLDFLRPYSVPNKKGTRFGR-YRCEKGTTAVLTEKVTPLELE 265

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>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)|
           (Proteasome subunit Z) (Macropain chain Z)
           (Multicatalytic endopeptidase complex chain Z)
          Length = 277

 Score =  104 bits (260), Expect = 1e-22
 Identities = 55/102 (53%), Positives = 73/102 (71%)
 Frame = -1

Query: 487 LPFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG 308
           LP+ TMGSGSLAAM+VFE K+R  +  EE   LV+EAI AGIFNDLGSGSN+D+CVI+K 
Sbjct: 165 LPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKN 224

Query: 307 NTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLK 182
             ++LR + +PN +     + Y   KG T VL+ KIT L+++
Sbjct: 225 KLDFLRPYTVPNKKGTRLGR-YRCEKGTTAVLTEKITPLEIE 265

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>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)|
           (Proteasome subunit Z) (Macropain chain Z)
           (Multicatalytic endopeptidase complex chain Z)
          Length = 277

 Score =  103 bits (258), Expect = 2e-22
 Identities = 54/102 (52%), Positives = 72/102 (70%)
 Frame = -1

Query: 487 LPFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG 308
           LP+ TMGSGSLAAM+VFE K+R  +  EE   LV+EAI AGIFNDLGSGSN+D+CVI+K 
Sbjct: 165 LPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKS 224

Query: 307 NTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLK 182
             ++LR   +PN +     + Y   KG T VL+ K+T L+++
Sbjct: 225 KLDFLRPFSVPNKKGTRLGR-YRCEKGTTAVLTEKVTPLEIE 265

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>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)|
           (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1)
           (Multicatalytic endopeptidase complex subunit PUP1)
          Length = 261

 Score = 95.1 bits (235), Expect = 9e-20
 Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = -1

Query: 481 FATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG-N 305
           + ++GSGSLAAM+V E  +++ LT+EE I L ++AI+AGI+NDLGSGSNVDVCV+  G +
Sbjct: 153 YLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKD 212

Query: 304 TEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQL 191
            EYLRN+  PN R     K Y F +G T VL   I  +
Sbjct: 213 AEYLRNYLTPNVRE-EKQKSYKFPRGTTAVLKESIVNI 249

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>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC|
           3.4.25.1)
          Length = 267

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 49/96 (51%), Positives = 61/96 (63%)
 Frame = -1

Query: 487 LPFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG 308
           LP+  +GSGSLAA+SV E KY+  L R E + LV EAI AGIFNDLGSGSN D+ VI + 
Sbjct: 157 LPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVIDEE 216

Query: 307 NTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKI 200
                R +  PN R    SK Y++++G T VL   I
Sbjct: 217 KATPYRGYSKPNERATKQSK-YTYDRGTTAVLKEDI 251

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>PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)|
           (Proteasome MECl-1) (Macropain subunit MECl-1)
           (Multicatalytic endopeptidase complex subunit MECl-1)
          Length = 273

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -1

Query: 487 LPFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG 308
           LPF  +GSG  AA++V E +++  +T E    L+ EA+ AGI  DLGSG NVD CVITK 
Sbjct: 161 LPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKT 220

Query: 307 NTEYLRNHELPNPRTFVSSKG-YSFNKGHTEVLSTKITQLKLKPEVADGDAME 152
             + LR   L +P   V   G Y F  G T VL+  +  L L+       AME
Sbjct: 221 GAKLLRT--LSSPTEPVKRSGRYHFVPGTTAVLTQTVKPLTLELVEETVQAME 271

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>PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)|
           (Proteasome MECl-1) (Macropain subunit MECl-1)
           (Multicatalytic endopeptidase complex subunit MECl-1)
          Length = 273

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -1

Query: 487 LPFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG 308
           LPF  +GSG  AA+++ E +++  +T E    L+ EAI AGI +DLGSG NVD CVIT G
Sbjct: 161 LPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGGNVDACVITAG 220

Query: 307 NTEYLRNHELPNPRTFVSSKG-YSFNKGHTEVLSTKITQLKLKPEVADGDAME 152
             +  R   L  P   V   G Y F  G T VL+ ++  L L+       AME
Sbjct: 221 GAKLQR--ALSTPTEPVQRAGRYRFAPGTTPVLTREVRPLTLELLEETVQAME 271

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>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 207

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 28/68 (41%), Positives = 39/68 (57%)
 Frame = -1

Query: 481 FATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNT 302
           +AT GSG   A S+ + +Y++ LT EEGI L  +AI   I  D+ SG  + V  ITK   
Sbjct: 134 YATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEGY 193

Query: 301 EYLRNHEL 278
           + L + EL
Sbjct: 194 KELSDSEL 201

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>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 210

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 29/72 (40%), Positives = 39/72 (54%)
 Frame = -1

Query: 469 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYLR 290
           GSGS  A  V E +YRE +T +EG+ L   AI      D  SG N+DV VITK   + L 
Sbjct: 139 GSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKRLD 198

Query: 289 NHELPNPRTFVS 254
             E+ + R  ++
Sbjct: 199 PEEVKSRRALLN 210

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>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 211

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 25/57 (43%), Positives = 33/57 (57%)
 Frame = -1

Query: 481 FATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITK 311
           +A+ GSGS     V E +Y E +T +EG+ LV  AI A    D  SG  +DV VIT+
Sbjct: 132 YASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITR 188

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>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 224

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 23/68 (33%), Positives = 35/68 (51%)
 Frame = -1

Query: 481 FATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNT 302
           F   GSGS  A  V E  Y   ++ EEGI L   A+++ +  D  SG+ + + VITK   
Sbjct: 133 FTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGV 192

Query: 301 EYLRNHEL 278
           +   + E+
Sbjct: 193 KIFEDEEI 200

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>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 207

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 26/68 (38%), Positives = 34/68 (50%)
 Frame = -1

Query: 481 FATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNT 302
           +   GSG   A SV + +YRE L   EGI +  EAI + I  D+ SG  + V  IT+   
Sbjct: 134 YVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITEEGY 193

Query: 301 EYLRNHEL 278
             L N  L
Sbjct: 194 RELSNSRL 201

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>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)|
           (Multicatalytic endopeptidase complex beta subunit)
          Length = 206

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 24/68 (35%), Positives = 36/68 (52%)
 Frame = -1

Query: 481 FATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNT 302
           +A  GSG   A S+ + +YRE ++  +GI L  +AI   I  D+ +G  + V  ITK   
Sbjct: 134 YAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDGY 193

Query: 301 EYLRNHEL 278
           +  R  EL
Sbjct: 194 KEYRGAEL 201

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>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome delta chain) (Tobacco cryptogein-induced
           protein 7) (tcI 7)
          Length = 234

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/58 (39%), Positives = 29/58 (50%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITK 311
           PFA  GSGS      F+  ++EG+T+EE   LV  A+   I  D  SG  V    I K
Sbjct: 137 PFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGGVVRTVTINK 194

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>PSMA_METJA (Q60177) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit) (20S proteasome
           alpha subunit)
          Length = 261

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEY 296
           +GSG    M + E +YR+ +T +EG+ L   A+     N+     NVDVC+IT  + ++
Sbjct: 166 IGSGRPVVMELLEKEYRDDITLDEGLELAITALTKA--NEDIKPENVDVCIITVKDAQF 222

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>PSMA_PYRFU (Q8U0L6) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 21/53 (39%), Positives = 31/53 (58%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVIT 314
           +GSG   AM++FE KYR+ +  E+ I L   A+   + N   S  N++V VIT
Sbjct: 166 IGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMENP--SADNIEVAVIT 216

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>PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVIT 314
           +GSG   AM++FE KYR+ +T +E I L   A+   +  +  S  N++V VIT
Sbjct: 166 IGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTM--EKPSAENIEVAVIT 216

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>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome subunit beta type 1) (20S proteasome beta
           subunit A-1) (Proteasome component CD)
          Length = 233

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVI 317
           PFA  GSGS      F+  +++ +T+EE   LV +A+   I  D  SG  V   +I
Sbjct: 136 PFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVII 191

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>PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome delta chain) (Macropain delta chain)
           (Multicatalytic endopeptidase complex delta chain)
           (Proteasome subunit Y)
          Length = 239

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = -1

Query: 481 FATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNT 302
           FA  GSGS       +  YREG+T+EE +   A A+   +  D  SG  + +  I +   
Sbjct: 159 FAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGV 218

Query: 301 E 299
           E
Sbjct: 219 E 219

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>PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4.25.1)|
           (Macropain subunit PRE3) (Proteinase YSCE subunit PRE3)
           (Multicatalytic endopeptidase complex subunit PRE3)
          Length = 215

 Score = 36.2 bits (82), Expect = 0.048
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = -1

Query: 487 LPFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG 308
           LP+A  GSGS       +  +RE +++EE +  +  ++   I  D  SG  + + V+T  
Sbjct: 141 LPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAA 200

Query: 307 NTEYL 293
             E L
Sbjct: 201 GVERL 205

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>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 36.2 bits (82), Expect = 0.048
 Identities = 19/53 (35%), Positives = 32/53 (60%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVIT 314
           +GSG   AM++FE KY++ ++ EE I L   A+   +  +  S  N++V +IT
Sbjct: 166 IGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTM--EKPSAENIEVAIIT 216

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>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC|
           3.4.25.1)
          Length = 226

 Score = 36.2 bits (82), Expect = 0.048
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           P A  GSGS       +  +RE +T+EE +  +  A+   +  D  SG  + + ++ K  
Sbjct: 148 PLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNKDG 207

Query: 304 TE 299
            E
Sbjct: 208 ME 209

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>PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome delta chain) (Macropain delta chain)
           (Multicatalytic endopeptidase complex delta chain)
           (Proteasome subunit Y) (Proteasome chain 5)
          Length = 238

 Score = 35.8 bits (81), Expect = 0.062
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -1

Query: 481 FATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNT 302
           FA  GSGS       +  YREG+T++E +   A A+   +  D  SG  + +  I +   
Sbjct: 158 FAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQQSGV 217

Query: 301 E 299
           E
Sbjct: 218 E 218

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>PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)|
           (Proteasome delta chain) (Macropain delta chain)
           (Multicatalytic endopeptidase complex delta chain)
           (Proteasome subunit Y)
          Length = 238

 Score = 35.8 bits (81), Expect = 0.062
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -1

Query: 481 FATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNT 302
           FA  GSGS       +  YREG+T++E +   A A+   +  D  SG  + +  I +   
Sbjct: 158 FAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQESGV 217

Query: 301 E 299
           E
Sbjct: 218 E 218

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>PSA4_ORYSA (Q9LE92) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S|
           proteasome alpha subunit C) (20S proteasome subunit
           alpha-3)
          Length = 250

 Score = 35.4 bits (80), Expect = 0.081
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -1

Query: 478 ATMGSGSLAAMSVFELKYREGLTREEGIALVAEAI 374
           A +G+ S AA S+ +  YR+G+TREE +AL  + +
Sbjct: 162 AAVGANSQAAQSMLKQDYRDGMTREEAVALALKVL 196

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>PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.25.1)|
           (Macropain subunit PRE2) (Proteinase YSCE subunit PRE2)
           (Multicatalytic endopeptidase complex subunit PRE2)
          Length = 287

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 23/80 (28%), Positives = 38/80 (47%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYL 293
           +GSG   A  V +  Y+  L+ E+ + L   +I A    D  SG +V++  +T+    Y 
Sbjct: 204 VGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDGWIYH 263

Query: 292 RNHELPNPRTFVSSKGYSFN 233
            NH++      V  +  SFN
Sbjct: 264 GNHDVGELFWKVKEEEGSFN 283

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>PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Low molecular mass protein 2)
          Length = 217

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PFA  GSGS       + +YR G+T+EE    V   +   +  D  SG    +  I + +
Sbjct: 141 PFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTIDEHS 200

Query: 304 TE 299
           T+
Sbjct: 201 TD 202

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>PSB9_RAT (P28077) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PFA  GSGS       +  Y+ G+T EE      +AI   +  D  SG  + +  IT   
Sbjct: 143 PFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTITADG 202

Query: 304 TEY--LRNHELP 275
            ++  +   ELP
Sbjct: 203 VDHRVILGDELP 214

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>PSB9_HUMAN (P28065) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 33.9 bits (76), Expect = 0.24
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PFA  GSGS       +  Y+ G++ EE      +AI   +  D  SG  + +  IT   
Sbjct: 143 PFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTITAAG 202

Query: 304 TEY--LRNHELP 275
            ++  +  +ELP
Sbjct: 203 VDHRVILGNELP 214

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>UBP4_YEAST (P32571) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 4)
           (Ubiquitin-specific-processing protease 4)
           (Deubiquitinating enzyme 4) (Vacuole biogenesis protein
           SSV7)
          Length = 926

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
 Frame = +3

Query: 66  SRTSTEKKEEMAQILSMTACLNVSTQDHSSIASPSATSGFSFSCVIFVDNTSVCPLLKLY 245
           SRT+T K +   Q +SM   LN+++  HSS  S    S  S S    +D+T V P    +
Sbjct: 498 SRTATPKLQRFPQTISMN--LNMNSNGHSSATSTIQPSCLSLSNNDSLDHTDVTP-TSSH 554

Query: 246 PFELTKVLG---FGNSWFLKYSVFPLVITQTSTLLPLPKS 356
            ++L   +G    GNS ++   +  ++ T   T + L  S
Sbjct: 555 NYDLDFAVGLENLGNSCYMNCIIQCILGTHELTQIFLDDS 594

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>PSMA_THEVO (Q97BZ8) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 233

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGI 362
           +GSG  A +S  E +Y+EGL+ +E + L  +A++A +
Sbjct: 165 IGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASL 201

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>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 246

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITK 311
           +G G   A+ VFE +YRE +T +E I L   A+      +  +  N+++ V+ K
Sbjct: 167 IGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEASREET-TADNLEIAVVDK 219

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>GPDA_HAEDU (Q7VNA0) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 336

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLRNHEL--PNPRTFVSSKG 245
           AI AGI + +G G+N    +IT+G  E  R  E    NP+TF+   G
Sbjct: 200 AIGAGISDGMGFGANARTALITRGLAEISRLGESLGANPKTFMGMAG 246

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>PSB9_MUSMB (O35522) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PF   GSGS       +  Y+ G+T EE       AI   +  D  SG  + +  IT   
Sbjct: 143 PFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAG 202

Query: 304 TEY--LRNHELP 275
            ++  +   ELP
Sbjct: 203 VDHRVILGDELP 214

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>PSB9_MUSSI (O35524) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PF   GSGS       +  Y+ G+T EE       AI   +  D  SG  + +  IT   
Sbjct: 143 PFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAG 202

Query: 304 TEY--LRNHELP 275
            ++  +   ELP
Sbjct: 203 VDHRVILGDELP 214

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>PSB9_MUSPL (O35523) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PF   GSGS       +  Y+ G+T EE       AI   +  D  SG  + +  IT   
Sbjct: 143 PFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRDGSSGGVIYLVTITVAG 202

Query: 304 TEY--LRNHELP 275
            ++  +   ELP
Sbjct: 203 VDHRVILGDELP 214

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>PSB9_MUSDU (O35521) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2)
          Length = 219

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PF   GSGS       +  Y+ G+T EE       AI   +  D  SG  + +  IT   
Sbjct: 143 PFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAG 202

Query: 304 TEY--LRNHELP 275
            ++  +   ELP
Sbjct: 203 VDHRVILGDELP 214

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>PSB9_MOUSE (P28076) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Proteasome chain 7) (Macropain chain 7) (Multicatalytic
           endopeptidase complex chain 7) (RING12 protein) (Low
           molecular mass protein 2) (LMP-2d)
          Length = 219

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PF   GSGS       +  Y+ G+T EE       AI   +  D  SG  + +  IT   
Sbjct: 143 PFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAG 202

Query: 304 TEY--LRNHELP 275
            ++  +   ELP
Sbjct: 203 VDHRVILGDELP 214

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>PSB9_SALSA (Q9DD33) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Low molecular mass protein 2)
          Length = 217

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PFA  GSGS       + +YR+ +++E+    V   +   +  D  SG    +  I +  
Sbjct: 141 PFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTIDEKG 200

Query: 304 TE--YLRNHELP 275
            E   +  +ELP
Sbjct: 201 AEEKCILGNELP 212

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>LYAM2_RAT (P98105) E-selectin precursor (Endothelial leukocyte adhesion|
           molecule 1) (ELAM-1) (Leukocyte-endothelial cell
           adhesion molecule 2) (LECAM2) (CD62E antigen)
          Length = 549

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 479 CHDGFWIPCCDVSV*VEVQRRPHKGGGNCT 390
           CH GF  P CD  V  + Q  P  G  NCT
Sbjct: 165 CHPGFLGPKCDQVVTCQEQEYPDHGSLNCT 194

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>PSMA_METMP (Q6M0L9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 259

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAI 374
           +GSG   AM V E KY E +T  EG+ L   A+
Sbjct: 167 IGSGRPIAMEVLESKYDENMTVSEGMELALYAL 199

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>PSB9_ONCMY (Q9PT26) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)|
           (Low molecular mass protein 2)
          Length = 217

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = -1

Query: 484 PFATMGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGN 305
           PFA  GSGS       + +YR+ +++E+    V   +   +  D  SG    +  I +  
Sbjct: 141 PFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTIDEKG 200

Query: 304 TE--YLRNHELP 275
            E   +  +ELP
Sbjct: 201 AEEKCILGNELP 212

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>PSMA_THEK1 (O24733) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYL 293
           +GSG   AM++FE  YR+ + +++ I L   A+   +      G  V    + +   + L
Sbjct: 166 IGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKL 225

Query: 292 RNHEL 278
              EL
Sbjct: 226 PREEL 230

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>PSMA_PYRKO (Q5JIU9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 260

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYL 293
           +GSG   AM++FE  YR+ + +++ I L   A+   +      G  V    + +   + L
Sbjct: 166 IGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEPTAEGIEVAYITMDEKRWKKL 225

Query: 292 RNHEL 278
              EL
Sbjct: 226 PREEL 230

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>CSPG2_MOUSE (Q62059) Versican core protein precursor (Large fibroblast|
            proteoglycan) (Chondroitin sulfate proteoglycan core
            protein 2) (PG-M)
          Length = 3358

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
 Frame = +3

Query: 327  TSTLLPLPKS--------LKIPARIASATSAIPSSLVRPSLYFNSNT 443
            T TL PL  S        + IPA IA   S +PS   RP+  +NSN+
Sbjct: 1634 TDTLSPLDMSKIMITNHHIYIPATIAPLDSKLPSPDARPTTVWNSNS 1680

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>GPD_ASHGO (Q759G5) Glycerol-3-phosphate dehydrogenase [NAD+] (EC 1.1.1.8)|
          Length = 424

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 11/61 (18%)
 Frame = -1

Query: 301 EYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQ-----------LKLKPEVADGDAM 155
           E L+ H  P  R     KG+S  K   ++LST I +             L PEVA G+  
Sbjct: 173 EQLKGHVKPGARAISCLKGFSVGKDGVQLLSTYIEEHLHIPCGALSGANLAPEVAKGNWS 232

Query: 154 E 152
           E
Sbjct: 233 E 233

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>GPDA_BACHK (Q6HL50) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 340

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 245
           A+ AGI + LG G N    ++T+G TE  R       NP TF    G
Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242

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>GPDA_BACCZ (Q63DM7) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 340

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 245
           A+ AGI + LG G N    ++T+G TE  R       NP TF    G
Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242

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>GPDA_BACCR (Q81FR4) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 340

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 245
           A+ AGI + LG G N    ++T+G TE  R       NP TF    G
Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242

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>GPDA_BACC1 (P61737) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 340

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 245
           A+ AGI + LG G N    ++T+G TE  R       NP TF    G
Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242

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>GPDA_BACAN (Q81SW8) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 340

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR--NHELPNPRTFVSSKG 245
           A+ AGI + LG G N    ++T+G TE  R       NP TF    G
Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242

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>SRB15_CAEEL (O01509) Serpentine receptor class beta-15 (Protein srb-15)|
          Length = 336

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
 Frame = +3

Query: 201 IFVDNTSVCPLLKLYPFELTKVLGFGNSWFL---------KYSVFPLVITQTSTLLPL-- 347
           +FV  +S+ PL+    F+L K    GN  FL          +SV   +I+ T  L+PL  
Sbjct: 28  LFVSISSIIPLIYFVIFKLPKTSFHGNLKFLFSAYFVSVFLFSVDFAIISTTEILIPLFS 87

Query: 348 --PKSLKIP---ARIASATSAIPSSL 410
             P +L IP    +I + T +I  SL
Sbjct: 88  KHPCNLLIPDQYLKIGNTTVSIFMSL 113

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>PSMA_THEAC (P25156) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 233

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNV---DVCVITKGNT 302
           +GSG  A +S  E +Y+E L  +E + L  +A++    + L  G  +   ++  IT GN 
Sbjct: 165 IGSGKDAVVSFLEREYKENLPEKEAVTLGIKALK----SSLEEGEELKAPEIASITVGNK 220

Query: 301 EYLRNHE 281
             + + E
Sbjct: 221 YRIYDQE 227

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>GPDA_METCA (Q604K1) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 335

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR 290
           AI AGI + LG G+N    +IT+G  E +R
Sbjct: 196 AIAAGISDGLGFGANARAALITRGLAEMMR 225

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>APCE_CYACA (Q9TLS6) Phycobilisome linker polypeptide (Anchor polypeptide)|
           (PBS-anchor protein)
          Length = 870

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
 Frame = +3

Query: 138 TQDHSSIASPSATSGFSFSCVI--FVDNTSVCPLLKLYPFELTKVLGFGNS--------- 284
           T D +S  S  +T G     +   F  +TS  P      F+   V+ +G+S         
Sbjct: 95  TSDQASSTSIQSTKGLGNGNIFQNFFKSTSEAPT----GFKPINVVRYGSSNMKKSIRDL 150

Query: 285 -WFLKYSVFPLVITQTSTLLPLPKSLKIPARIASATSA 395
            WFL+Y  + +V   TS L+   K L+     A ++SA
Sbjct: 151 DWFLRYVTYAIVAGDTSILIVNTKGLRELIDKACSSSA 188

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>GPDA_GLOVI (Q7NF59) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 305

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR 290
           AI AG+ + LG G+N    +IT+G  E +R
Sbjct: 166 AIAAGVSDGLGLGANAKAALITRGLAEMIR 195

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>PSMA_METTH (O26782) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic|
           endopeptidase complex alpha subunit)
          Length = 248

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKGNTEYL 293
           +G+G  AAM  FE KY + +   + I L  +A+         +  +V++ VI   + +Y 
Sbjct: 166 IGAGRPAAMEEFEKKYSDDMNLNQAIELALDAVYEAT-EGKTTPESVEIAVIEAADKKYR 224

Query: 292 R 290
           R
Sbjct: 225 R 225

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>Y199_DEIRA (Q9RXV7) UPF0133 protein DR0199|
          Length = 96

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 205 KITQLKLKPEVADGDAME 152
           K+T LK+KPE  DGD +E
Sbjct: 46  KVTSLKIKPEAVDGDDVE 63

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>NXSA4_NAJSP (O57327) Alpha-neurotoxin NTX-4 precursor|
          Length = 83

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 21/68 (30%), Positives = 28/68 (41%)
 Frame = +2

Query: 281 LVVSQVLCIPLGYHTNIHVAATSQVIEDTSTDCLGYKCNSLLPCEAFSVLQLKH*HRSKG 460
           L+V  ++C+ LGY    H   +SQ    T+T C G + N                   KG
Sbjct: 8   LLVVTIVCLDLGYTLECHNQQSSQA--PTTTGCSGGETNCY----------------KKG 49

Query: 461 SRTHRGKR 484
            R HRG R
Sbjct: 50  WRDHRGYR 57

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>GPDA_PASMU (Q9CL17) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 337

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLRNHEL--PNPRTFVSSKG 245
           AI AG+ + +G G+N    +IT+G  E  R       NP TF+   G
Sbjct: 201 AISAGMSDGMGFGANARTALITRGIAEISRLGASLGANPNTFMGMSG 247

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>GPDA_SYMTH (Q67NS7) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 342

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLRNHEL--PNPRTFVSSKG 245
           A+ AGI + LG G N    +IT+G  E  R       NP TF    G
Sbjct: 191 ALGAGISDGLGMGDNARAALITRGLVEMARLGRAMGANPLTFAGLAG 237

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>PSA5_ENTHI (Q94561) Proteasome subunit alpha type 5 (EC 3.4.25.1)|
          Length = 247

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -1

Query: 469 GSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVIT 314
           G+G+ AA S+   KY + +T  E   L    ++  +   L S  NV+V ++T
Sbjct: 171 GAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVMEEKLNS-KNVEVALVT 221

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>PIGT_HUMAN (Q969N2) GPI transamidase component PIG-T precursor|
           (Phosphatidylinositol-glycan biosynthesis, class T
           protein)
          Length = 578

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
 Frame = +3

Query: 132 VSTQDHSSIASPSATSGFSFSCVIFVDNTSVCPLLKLYPFELTKVLGFGNS---WFLKYS 302
           V+  D S     +  SG   + + F+D+T+      + P    K LG  N    +FL+Y+
Sbjct: 120 VTDVDKSWKELSNVLSGIFCASLNFIDSTNT-----VTPTASFKPLGLANDTDHYFLRYA 174

Query: 303 VFPLVITQTSTLLPLPKSL 359
           V P  +  T  L P  K L
Sbjct: 175 VLPREVVCTENLTPWKKLL 193

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>CYSZ_PASHA (P72205) Protein cysZ homolog (Fragment)|
          Length = 86

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -1

Query: 334 VDVCVITKGNTEYLRNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLKPEVADGDAM 155
           V VC  T    +  RN  L N     S   Y+F K ++  LST+    ++ P V +GD  
Sbjct: 25  VAVCGATALWVKEYRNFFLNNQTGEFSKADYTFTKVNSTSLSTETRTGEVSPNVRNGDIR 84

Query: 154 EE 149
           ++
Sbjct: 85  KQ 86

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>PSA7_SCHPO (Q10329) Probable proteasome subunit alpha type 7 (EC 3.4.25.1)|
          Length = 259

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -1

Query: 472 MGSGSLAAMSVFELKYREGLTREEGIALVAEAIRAGIFNDLGSGSNVDVCVITKG-NTEY 296
           +G  S AA    E  ++EGL+R+E I L   ++   +    G   N+++ ++  G + E+
Sbjct: 163 IGRASKAAREYLEKNWKEGLSRDETIHLAVSSLLEVVQTASG---NIELAIMDPGKDVEF 219

Query: 295 LRNHEL 278
           L + ++
Sbjct: 220 LHSDKI 225

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>GPDA_CHLTE (Q8KG76) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 333

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLR 290
           AI AGI + LG G N    +IT+G  E  R
Sbjct: 195 AIAAGISDGLGFGDNAKAAIITRGLAEISR 224

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>UBR1_CAEEL (P91133) Ubiquitin-protein ligase E3 component N-recognin (EC|
            6.-.-.-) (Ubiquitin-protein ligase E3-alpha)
          Length = 1927

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -1

Query: 292  RNHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLKPEVADGDA 158
            RN E+P     VS KG+S  + H+E     + +L   P+ A+  A
Sbjct: 1296 RNLEMPLSSESVSKKGHSRKRSHSERSLLDLEKLSKDPDTANTSA 1340

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>GPDA_DESPS (Q6AQJ3) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 339

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLRNHELPN--PRTFVSSKG 245
           AI AGI + L  GSN    +IT+G  E  R     N  P TF    G
Sbjct: 203 AIAAGISDGLSYGSNARAALITRGLAEMQRLGAAMNADPATFAGLSG 249

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>GPDA_COREF (Q8FPR0) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 339

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 379 AIRAGIFNDLGSGSNVDVCVITKGNTEYLRNHEL--PNPRTFVSSKG 245
           A+  GI +  G G N +  +IT+G  E  R  E    +PRTF    G
Sbjct: 202 ALACGIAHGFGLGENSNASLITRGLAEIARLGEAMGADPRTFAGLAG 248


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,802,507
Number of Sequences: 219361
Number of extensions: 1491205
Number of successful extensions: 4279
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 4185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4275
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result