ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group... 174 2e-40
2ref|XM_464458.1| Oryza sativa (japonica cultivar-group), mRNA 174 2e-40
3dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
6dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
7gb|AY105867.1| Zea mays PCO143262 mRNA sequence 127 4e-26
8gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complet... 121 2e-24
9gb|BT016379.1| Zea mays clone Contig212 mRNA sequence 121 2e-24
10gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, ... 121 2e-24
11gb|AY109331.1| Zea mays CL253_2 mRNA sequence 119 9e-24
12gb|BT019326.1| Zea mays clone Contig1045.F mRNA sequence 111 2e-21
13gb|AY105966.1| Zea mays PCO143261 mRNA sequence 111 2e-21
14gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence 109 8e-21
15gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-assoc... 105 1e-19
16gb|DQ083231.1| Oryza sativa (indica cultivar-group) clone 5B6A82... 105 1e-19
17gb|DQ083227.1| Oryza sativa (indica cultivar-group) clone 2B5A77... 105 1e-19
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
19dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
20dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
21dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
22dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
23dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
24dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
25dbj|AK062342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
26dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
27gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete s... 44 0.42
28gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 44 0.42
29gb|AC108806.10| Mus musculus chromosome 14, clone RP23-246G7, co... 42 1.6
30gb|AC104797.3| Homo sapiens BAC clone RP11-327I3 from 4, complet... 42 1.6
31gb|AC097514.3| Homo sapiens BAC clone RP11-425J20 from 4, comple... 42 1.6
32gb|AC011345.5| Homo sapiens chromosome 5 clone CTC-293E5, comple... 42 1.6
33emb|BX276097.12| Zebrafish DNA sequence from clone DKEY-97C6 in ... 42 1.6
34emb|CT025686.7| Mouse DNA sequence from clone RP24-273I13 on chr... 42 1.6
35gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, co... 40 6.5
36gb|AC147160.2| Mus musculus BAC clone RP24-336A22 from chromosom... 40 6.5
37ref|XM_444959.1| Candida glabrata CBS138 hypothetical protein (C... 40 6.5
38gb|AC125202.3| Mus musculus BAC clone RP23-231N20 from chromosom... 40 6.5
39gb|AC010091.2| Homo sapiens BAC clone RP11-295A1 from 7, complet... 40 6.5
40emb|AL590086.4| Human DNA sequence from clone RP11-62J23 on chro... 40 6.5
41emb|AL450163.12| Human DNA sequence from clone RP11-384L19 on ch... 40 6.5
42emb|AL135839.15| Human DNA sequence from clone RP1-188K17 on chr... 40 6.5
43emb|AL122058.19|HSJ813D12 Human DNA sequence from clone RP4-813D... 40 6.5
44emb|CR380947.1| Candida glabrata strain CBS138 chromosome A comp... 40 6.5
45gb|AF332547.1| Pseudomonas aeruginosa flagellar hook-associated ... 40 6.5
46emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 i... 40 6.5
47gb|AC068025.12| Homo sapiens chromosome 17, clone RP11-802D6, co... 40 6.5
48emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in... 40 6.5
49emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in ... 40 6.5
50gb|AC084382.2| Mus musculus BAC clone RP23-5K17 from 15, complet... 40 6.5
51gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence 40 6.5
52emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, co... 40 6.5

>ref|XM_506746.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1225_F07.15
           mRNA
          Length = 1000

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Minus

                                                                       
Query: 378 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 678 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 619

                                                       
Query: 438 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 618 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcg 575



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 114/134 (85%), Gaps = 6/134 (4%)
 Strand = Plus / Minus

                                                                        
Query: 58   gatgaaccattgctggttactattactgatcagaatttaacacacatgggacaatagtac 117
            |||| |||||||||| | ||||||||||||   ||| || ||  ||||||||| ||||||
Sbjct: 1000 gatggaccattgctgataactattactgattgaaatgtagcaagcatgggaca-tagtac 942

                                                                        
Query: 118  ataaacagagctagctaaaatgagaagccacaatactgaccgaaaaaaccaccatgaata 177
            || | |||||||||||||| |||||  |||||||||||||||  |||||||||| |||||
Sbjct: 941  atca-cagagctagctaaa-tgagacaccacaatactgaccg--aaaaccaccaagaata 886

                          
Query: 178  aag-ttacacaaca 190
            ||| ||||||||||
Sbjct: 885  aagattacacaaca 872



to top

>ref|XM_464458.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 991

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Minus

                                                                       
Query: 378 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 661 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 602

                                                       
Query: 438 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 601 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcg 558



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 121/141 (85%), Gaps = 6/141 (4%)
 Strand = Plus / Minus

                                                                       
Query: 51  gcaatatgatgaaccattgctggttactattactgatcagaatttaacacacatgggaca 110
           ||||||||||| |||||||||| | ||||||||||||   ||| || ||  |||||||| 
Sbjct: 990 gcaatatgatggaccattgctgataactattactgattgaaatgtagcaagcatgggac- 932

                                                                       
Query: 111 atagtacataaacagagctagctaaaatgagaagccacaatactgaccgaaaaaaccacc 170
           |||||||||  |||||||||||| ||||||||  |||||||||||||||  |||||||||
Sbjct: 931 atagtacat-cacagagctagct-aaatgagacaccacaatactgaccg--aaaaccacc 876

                                
Query: 171 atgaataaag-ttacacaaca 190
           | |||||||| ||||||||||
Sbjct: 875 aagaataaagattacacaaca 855



to top

>dbj|AK061911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A06, full
           insert sequence
          Length = 991

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Minus

                                                                       
Query: 378 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 661 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 602

                                                       
Query: 438 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 601 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcg 558



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 120/141 (85%), Gaps = 6/141 (4%)
 Strand = Plus / Minus

                                                                       
Query: 51  gcaatatgatgaaccattgctggttactattactgatcagaatttaacacacatgggaca 110
           ||||||||||| |||||||||| | ||||||||||||   ||| || ||  |||||||| 
Sbjct: 990 gcaatatgatggaccattgctgataactattactgattgaaatgtagcaagcatgggac- 932

                                                                       
Query: 111 atagtacataaacagagctagctaaaatgagaagccacaatactgaccgaaaaaaccacc 170
           |||||||||  |||||||||||  ||||||||  |||||||||||||||  |||||||||
Sbjct: 931 atagtacat-cacagagctagc-caaatgagacaccacaatactgaccg--aaaaccacc 876

                                
Query: 171 atgaataaag-ttacacaaca 190
           | |||||||| ||||||||||
Sbjct: 875 aagaataaagattacacaaca 855



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                           
Query: 378     atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 5346040 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 5346099

                                                           
Query: 438     gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
               ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 5346100 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcg 5346143



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 121/141 (85%), Gaps = 6/141 (4%)
 Strand = Plus / Plus

                                                                           
Query: 51      gcaatatgatgaaccattgctggttactattactgatcagaatttaacacacatgggaca 110
               ||||||||||| |||||||||| | ||||||||||||   ||| || ||  |||||||| 
Sbjct: 5345711 gcaatatgatggaccattgctgataactattactgattgaaatgtagcaagcatgggac- 5345769

                                                                           
Query: 111     atagtacataaacagagctagctaaaatgagaagccacaatactgaccgaaaaaaccacc 170
               |||||||||  |||||||||||| ||||||||  |||||||||||||||  |||||||||
Sbjct: 5345770 atagtacat-cacagagctagct-aaatgagacaccacaatactgaccg--aaaaccacc 5345825

                                    
Query: 171     atgaataaag-ttacacaaca 190
               | |||||||| ||||||||||
Sbjct: 5345826 aagaataaagattacacaaca 5345846



to top

>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1225_F07
          Length = 142772

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Plus

                                                                         
Query: 378   atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 72343 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 72402

                                                         
Query: 438   gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
             ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 72403 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcg 72446



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 121/141 (85%), Gaps = 6/141 (4%)
 Strand = Plus / Plus

                                                                         
Query: 51    gcaatatgatgaaccattgctggttactattactgatcagaatttaacacacatgggaca 110
             ||||||||||| |||||||||| | ||||||||||||   ||| || ||  |||||||| 
Sbjct: 72014 gcaatatgatggaccattgctgataactattactgattgaaatgtagcaagcatgggac- 72072

                                                                         
Query: 111   atagtacataaacagagctagctaaaatgagaagccacaatactgaccgaaaaaaccacc 170
             |||||||||  |||||||||||| ||||||||  |||||||||||||||  |||||||||
Sbjct: 72073 atagtacat-cacagagctagct-aaatgagacaccacaatactgaccg--aaaaccacc 72128

                                  
Query: 171   atgaataaag-ttacacaaca 190
             | |||||||| ||||||||||
Sbjct: 72129 aagaataaagattacacaaca 72149



to top

>dbj|AK067403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106E09, full
           insert sequence
          Length = 1000

 Score =  174 bits (88), Expect = 2e-40
 Identities = 100/104 (96%)
 Strand = Plus / Minus

                                                                       
Query: 378 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 678 atcttgtcgagcttctcagccttcaccactgggttggccttggcgatggcatccctagcc 619

                                                       
Query: 438 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 618 gcagtccggtagtcgaactggcattcatgcttgtcggagtagcg 575



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 114/134 (85%), Gaps = 6/134 (4%)
 Strand = Plus / Minus

                                                                        
Query: 58   gatgaaccattgctggttactattactgatcagaatttaacacacatgggacaatagtac 117
            |||| |||||||||| | ||||||||||||   ||| || ||  ||||||||| ||||||
Sbjct: 1000 gatggaccattgctgataactattactgattgaaatgtagcaagcatgggaca-tagtac 942

                                                                        
Query: 118  ataaacagagctagctaaaatgagaagccacaatactgaccgaaaaaaccaccatgaata 177
            || | |||||||||||||| |||||  |||||||||||||||  |||||||||| |||||
Sbjct: 941  atca-cagagctagctaaa-tgagacaccacaatactgaccg--aaaaccaccaagaata 886

                          
Query: 178  aag-ttacacaaca 190
            ||| ||||||||||
Sbjct: 885  aagattacacaaca 872



to top

>gb|AY105867.1| Zea mays PCO143262 mRNA sequence
          Length = 984

 Score =  127 bits (64), Expect = 4e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                       
Query: 378 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
           |||||||| |||||||| |||||||||||||| |||||||||||||| || |||||||||
Sbjct: 600 atcttgtcaagcttctccgccttcaccactggattggccttggcgatagcgtccctagct 541

                                                       
Query: 438 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           ||||| || ||||||||||||||||| || |||||||| |||||
Sbjct: 540 gcagttcgatagtcgaactggcagtcgtgtttgtcggagtagcg 497



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 224 ttcttgcagctgccacgacgcagtgtgcatca 255
           ||||||||||||||| || || ||||||||||
Sbjct: 759 ttcttgcagctgccaggatgctgtgtgcatca 728



to top

>gb|AY787873.1| Zea mays zinc finger protein (znf1) mRNA, complete cds
          Length = 1000

 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           |||| |||||||||||||| |||||||||||||| || || |||||||| ||||| ||||
Sbjct: 616 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 557

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           | || ||||||||||||||||||| |||||| ||||||||||| |||||
Sbjct: 556 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcg 508



to top

>gb|BT016379.1| Zea mays clone Contig212 mRNA sequence
          Length = 1020

 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           |||| |||||||||||||| |||||||||||||| || || |||||||| ||||| ||||
Sbjct: 632 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 573

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           | || ||||||||||||||||||| |||||| ||||||||||| |||||
Sbjct: 572 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcg 524



to top

>gb|AY515607.1| Zea mays putative zinc finger protein ZmZf mRNA, complete cds
          Length = 1162

 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           |||| |||||||||||||| |||||||||||||| || || |||||||| ||||| ||||
Sbjct: 808 cctagatcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 749

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           | || ||||||||||||||||||| |||||| ||||||||||| |||||
Sbjct: 748 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcg 700



to top

>gb|AY109331.1| Zea mays CL253_2 mRNA sequence
          Length = 2256

 Score =  119 bits (60), Expect = 9e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                        
Query: 378  atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
            |||||||||||||| |||||||||||||| || || |||||||| ||||| ||||| || 
Sbjct: 1607 atcttgtcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccctggca 1548

                                                        
Query: 438  gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
            ||||||||||||||||||| |||||| ||||||||||| |||||
Sbjct: 1547 gcagtccggtagtcgaacttgcagtcgtgcttgtcggagtagcg 1504



to top

>gb|BT019326.1| Zea mays clone Contig1045.F mRNA sequence
          Length = 779

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                       
Query: 378 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
           ||||||||||||||||| ||| ||||||| || ||||||||||| || || ||||| |||
Sbjct: 289 atcttgtcgagcttctccgccctcaccacaggattggccttggcaatcgcgtcccttgct 230

                                                       
Query: 438 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||||||| ||||||||||| |||||||| |||||||| |||||
Sbjct: 229 gcagtccgatagtcgaactgacagtcatgtttgtcggagtagcg 186



to top

>gb|AY105966.1| Zea mays PCO143261 mRNA sequence
          Length = 1035

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                       
Query: 378 atcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccctagct 437
           ||||||||||||||||| ||| ||||||| || ||||||||||| || || ||||| |||
Sbjct: 601 atcttgtcgagcttctccgccctcaccacaggattggccttggcaatcgcgtcccttgct 542

                                                       
Query: 438 gcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||||||| ||||||||||| |||||||| |||||||| |||||
Sbjct: 541 gcagtccgatagtcgaactgacagtcatgtttgtcggagtagcg 498



to top

>gb|BT017601.1| Zea mays clone EL01N0431H03.c mRNA sequence
          Length = 941

 Score =  109 bits (55), Expect = 8e-21
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           |||| |||||| ||||||| |||||||||||||| || || |||||||| ||||| ||||
Sbjct: 638 cctagatcttggcgagcttgtctgccttcaccaccggattagccttggcaatggcgtccc 579

                                                      
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcgga 475
           | || ||||||||||||||||||| |||||| |||||||||||
Sbjct: 578 tggcagcagtccggtagtcgaacttgcagtcgtgcttgtcgga 536



to top

>gb|AY345599.2| Oryza sativa (indica cultivar-group) stress-associated protein-3
           (SAP-3) mRNA, complete cds
          Length = 1132

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 577 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 518

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 517 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 469



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                         
Query: 108 acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
           |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 853 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 810



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cagcaaagatggatgatgaa 335
           ||||||||||||||||||||
Sbjct: 639 cagcaaagatggatgatgaa 620



to top

>gb|DQ083231.1| Oryza sativa (indica cultivar-group) clone 5B6A82 mRNA sequence
          Length = 391

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 123 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 64

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 63  tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 15



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 122 acagagctagctaaaatgagaagccacaatac 153
           |||||||||||| ||||| |||||||||||||
Sbjct: 386 acagagctagct-aaatgcgaagccacaatac 356



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cagcaaagatggatgatgaa 335
           ||||||||||||||||||||
Sbjct: 185 cagcaaagatggatgatgaa 166



to top

>gb|DQ083227.1| Oryza sativa (indica cultivar-group) clone 2B5A77 mRNA sequence
          Length = 391

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 123 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 64

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 63  tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 15



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cagcaaagatggatgatgaa 335
           ||||||||||||||||||||
Sbjct: 185 cagcaaagatggatgatgaa 166



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                            
Query: 373      cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
                ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 24109922 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 24109863

                                                                 
Query: 433      tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
                |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 24109862 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 24109814



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                              
Query: 108      acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
                |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 24110198 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 24110155



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 316      cagcaaagatggatgatgaa 335
                ||||||||||||||||||||
Sbjct: 24109984 cagcaaagatggatgatgaa 24109965



to top

>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0417G12
          Length = 163568

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                         
Query: 373   cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
             ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 43380 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 43321

                                                              
Query: 433   tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
             |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 43320 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 43272



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                           
Query: 108   acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
             |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 43656 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 43613



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   cagcaaagatggatgatgaa 335
             ||||||||||||||||||||
Sbjct: 43442 cagcaaagatggatgatgaa 43423



to top

>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0429G06
          Length = 158321

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                          
Query: 373    cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
              ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 119615 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 119556

                                                               
Query: 433    tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
              |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 119555 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 119507



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                            
Query: 108    acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
              |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 119891 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 119848



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    cagcaaagatggatgatgaa 335
              ||||||||||||||||||||
Sbjct: 119677 cagcaaagatggatgatgaa 119658



to top

>dbj|AK104562.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D03, full
           insert sequence
          Length = 999

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 666 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 607

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 606 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 558



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                         
Query: 108 acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
           |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 942 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 899



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cagcaaagatggatgatgaa 335
           ||||||||||||||||||||
Sbjct: 728 cagcaaagatggatgatgaa 709



to top

>dbj|AK104605.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A12, full
           insert sequence
          Length = 1009

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 666 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 607

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 606 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 558



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                         
Query: 108 acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
           |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 942 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 899



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cagcaaagatggatgatgaa 335
           ||||||||||||||||||||
Sbjct: 728 cagcaaagatggatgatgaa 709



to top

>dbj|AK104175.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C11, full
           insert sequence
          Length = 1000

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 667 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 608

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 607 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 559



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                         
Query: 108 acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
           |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 943 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 900



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cagcaaagatggatgatgaa 335
           ||||||||||||||||||||
Sbjct: 729 cagcaaagatggatgatgaa 710



to top

>dbj|AK069720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026K20, full
           insert sequence
          Length = 1209

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 664 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 605

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 604 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 556



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                         
Query: 108 acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
           |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 940 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 897



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cagcaaagatggatgatgaa 335
           ||||||||||||||||||||
Sbjct: 726 cagcaaagatggatgatgaa 707



to top

>dbj|AK062342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-F03, full
           insert sequence
          Length = 631

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 305 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 246

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 245 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 197



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                         
Query: 108 acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
           |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 581 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 538



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cagcaaagatggatgatgaa 335
           ||||||||||||||||||||
Sbjct: 367 cagcaaagatggatgatgaa 348



to top

>dbj|AK060008.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C08, full
           insert sequence
          Length = 1021

 Score =  105 bits (53), Expect = 1e-19
 Identities = 95/109 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cctaaatcttgtcgagcttctctgccttcaccactgggttggccttggcgatggcatccc 432
           ||||||| ||||| || ||||| ||||||||||| || || |||||||| || |||||||
Sbjct: 663 cctaaattttgtcaagtttctccgccttcaccaccggattagccttggcaatagcatccc 604

                                                            
Query: 433 tagctgcagtccggtagtcgaactggcagtcatgcttgtcggaatagcg 481
           |||| || ||||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 603 tagcagcggtccgatagtcaaactggcagtcatgcttatcggaatagcg 555



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Minus

                                                         
Query: 108 acaatagtacataaacagagctagctaaaatgagaagccacaatac 153
           |||||||||||| | ||||||||||| ||||| |||||||||||||
Sbjct: 939 acaatagtacatta-cagagctagct-aaatgcgaagccacaatac 896



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cagcaaagatggatgatgaa 335
           ||||||||||||||||||||
Sbjct: 725 cagcaaagatggatgatgaa 706



to top

>gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete sequence
          Length = 172417

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 22     atactcaaatatgtgaaatgaa 43
              ||||||||||||||||||||||
Sbjct: 131727 atactcaaatatgtgaaatgaa 131748



to top

>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 22     atactcaaatatgtgaaatgaa 43
              ||||||||||||||||||||||
Sbjct: 131727 atactcaaatatgtgaaatgaa 131748



to top

>gb|AC108806.10| Mus musculus chromosome 14, clone RP23-246G7, complete sequence
          Length = 189619

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 76    actattactgatcagaattta 96
             |||||||||||||||||||||
Sbjct: 65007 actattactgatcagaattta 65027



to top

>gb|AC104797.3| Homo sapiens BAC clone RP11-327I3 from 4, complete sequence
          Length = 57338

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 337   cttggcagattgcaaccattt 357
             |||||||||||||||||||||
Sbjct: 56838 cttggcagattgcaaccattt 56858



to top

>gb|AC097514.3| Homo sapiens BAC clone RP11-425J20 from 4, complete sequence
          Length = 177027

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 337  cttggcagattgcaaccattt 357
            |||||||||||||||||||||
Sbjct: 1500 cttggcagattgcaaccattt 1520



to top

>gb|AC011345.5| Homo sapiens chromosome 5 clone CTC-293E5, complete sequence
          Length = 105797

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   aatactgaccgaaaaaaccac 169
             |||||||||||||||||||||
Sbjct: 63131 aatactgaccgaaaaaaccac 63151



to top

>emb|BX276097.12| Zebrafish DNA sequence from clone DKEY-97C6 in linkage group 20,
             complete sequence
          Length = 128871

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 7     taaacatgattcaacatactcaaat 31
             |||||||||||||| ||||||||||
Sbjct: 21979 taaacatgattcaaaatactcaaat 22003



to top

>emb|CT025686.7| Mouse DNA sequence from clone RP24-273I13 on chromosome 14, complete
              sequence
          Length = 186233

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     actattactgatcagaattta 96
              |||||||||||||||||||||
Sbjct: 102056 actattactgatcagaattta 102036



to top

>gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, complete sequence
          Length = 222121

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    gatggcatccctagctgcag 441
              ||||||||||||||||||||
Sbjct: 181645 gatggcatccctagctgcag 181626



to top

>gb|AC147160.2| Mus musculus BAC clone RP24-336A22 from chromosome 15, complete
             sequence
          Length = 205374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aacatactcaaatatgtgaa 38
             ||||||||||||||||||||
Sbjct: 18674 aacatactcaaatatgtgaa 18693



to top

>ref|XM_444959.1| Candida glabrata CBS138 hypothetical protein (CAGL0A04411g) partial
            mRNA
          Length = 1968

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  gcaaagatggatgatgaacc 337
            ||||||||||||||||||||
Sbjct: 1567 gcaaagatggatgatgaacc 1586



to top

>gb|AC125202.3| Mus musculus BAC clone RP23-231N20 from chromosome 19, complete sequence
          Length = 207191

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     atactcaaatatgtgaaatgaact 45
              ||||||||||||| ||||||||||
Sbjct: 145509 atactcaaatatgagaaatgaact 145486



to top

>gb|AC010091.2| Homo sapiens BAC clone RP11-295A1 from 7, complete sequence
          Length = 56864

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 123   cagagctagctaaaatgagaagccacaa 150
             |||||||||||||||| |||| ||||||
Sbjct: 28635 cagagctagctaaaatcagaaaccacaa 28662



to top

>emb|AL590086.4| Human DNA sequence from clone RP11-62J23 on chromosome 13, complete
             sequence
          Length = 24524

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    atgattcaacatactcaaat 31
             ||||||||||||||||||||
Sbjct: 12697 atgattcaacatactcaaat 12716



to top

>emb|AL450163.12| Human DNA sequence from clone RP11-384L19 on chromosome 1 Contains part
              of the gene for C-terminal PDZ domain ligand of neuronal
              nitric oxide synthase (CAPON), complete sequence
          Length = 208408

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    ttctctgccttcaccactgg 409
              ||||||||||||||||||||
Sbjct: 119416 ttctctgccttcaccactgg 119435



to top

>emb|AL135839.15| Human DNA sequence from clone RP1-188K17 on chromosome 6q22.22-23.3
             Contains the part of the SGK gene for serum/glucocorticoid
             regulated kinase and a CpG island, complete sequence
          Length = 113673

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    ccattgctggttactattac 83
             ||||||||||||||||||||
Sbjct: 34577 ccattgctggttactattac 34558



to top

>emb|AL122058.19|HSJ813D12 Human DNA sequence from clone RP4-813D12 on chromosome 20 Contains the
             5' end of the BMP7 gene for bone morphogenetic protein 7
             (osteogenic protein 1), two novel genes and a CpG island,
             complete sequence
          Length = 101473

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   tggatgatgaaccttggcag 344
             ||||||||||||||||||||
Sbjct: 34937 tggatgatgaaccttggcag 34918



to top

>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence
          Length = 485192

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    gcaaagatggatgatgaacc 337
              ||||||||||||||||||||
Sbjct: 430451 gcaaagatggatgatgaacc 430470



to top

>gb|AF332547.1| Pseudomonas aeruginosa flagellar hook-associated protein 1 FlgK
           (flgK), flagellar hook-associated protein type 3 FlgL
           (flgL), and flagellar glycosyl transferase (fgtA) genes,
           complete cds; and unknown genes
          Length = 19758

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 411 ttggccttggcgatggcatc 430
           ||||||||||||||||||||
Sbjct: 560 ttggccttggcgatggcatc 541



to top

>emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 in linkage group 22,
           complete sequence
          Length = 201928

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 aatagtacataaacagagct 129
           ||||||||||||||||||||
Sbjct: 366 aatagtacataaacagagct 385



to top

>gb|AC068025.12| Homo sapiens chromosome 17, clone RP11-802D6, complete sequence
          Length = 190194

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   catgaataaagttacacaac 189
             ||||||||||||||||||||
Sbjct: 99610 catgaataaagttacacaac 99629



to top

>emb|BX908757.10| Zebrafish DNA sequence from clone DKEY-206L1 in linkage group 22,
              complete sequence
          Length = 143845

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    aatagtacataaacagagct 129
              ||||||||||||||||||||
Sbjct: 142211 aatagtacataaacagagct 142230



to top

>emb|AL953841.5| Zebrafish DNA sequence from clone DKEY-44G23 in linkage group 22,
             complete sequence
          Length = 219929

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   aatagtacataaacagagct 129
             ||||||||||||||||||||
Sbjct: 44647 aatagtacataaacagagct 44666



to top

>gb|AC084382.2| Mus musculus BAC clone RP23-5K17 from 15, complete sequence
          Length = 164883

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    aacatactcaaatatgtgaa 38
             ||||||||||||||||||||
Sbjct: 21027 aacatactcaaatatgtgaa 21008



to top

>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    tgtcgagcttctctgccttc 401
              ||||||||||||||||||||
Sbjct: 127622 tgtcgagcttctctgccttc 127603



to top

>emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, complete sequence
          Length = 193193

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    gagaagccacaatactgacc 158
              ||||||||||||||||||||
Sbjct: 181122 gagaagccacaatactgacc 181141


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,333,956
Number of Sequences: 3902068
Number of extensions: 4333956
Number of successful extensions: 80791
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80576
Number of HSP's gapped (non-prelim): 187
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top