ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart40b07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473353.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 52.0 bits (26), Expect = 0.002 Identities = 85/104 (81%), Gaps = 3/104 (2%) Strand = Plus / Minus Query: 187 cgacgccctaggtcgcttgctgccggcccaccccgcctctgcgtgcatctgcggtaccca 246 ||||||||| ||||||||||||||||| ||| ||| |||| ||||||||| ||||| Sbjct: 732 cgacgccctgggtcgcttgctgccggc---gccccactccgcgttcatctgcggcaccca 676 Query: 247 cagctcttgcctggcccgctcacccgcggcgacaaccacgccac 290 | |||| | ||||||||||| | ||||||||| | ||||||| Sbjct: 675 ccgctcgcggctggcccgctcgtcggcggcgacagcgacgccac 632
>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence Length = 192473 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 |||||||||||||||||||||||||| Sbjct: 36800 ctactactagtactagtactagtact 36825 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtactggtact 144 ||||||||| |||||||||||||||| ||||| Sbjct: 36794 ctactactactactagtactagtactagtact 36825 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtactg 145 ||||||||||||||||| |||| |||||| Sbjct: 36810 tactagtactagtactactactagtactg 36838 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtact 144 ||||||||||| ||||||||||| |||| Sbjct: 36816 tactagtactactactagtactgctact 36843 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtact 144 |||||||| ||||||||||||| ||||| Sbjct: 36835 tactagtagtagtactagtactagtact 36808 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 36823 tactagtactagtactagta 36804
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 52.0 bits (26), Expect = 0.002 Identities = 85/104 (81%), Gaps = 3/104 (2%) Strand = Plus / Minus Query: 187 cgacgccctaggtcgcttgctgccggcccaccccgcctctgcgtgcatctgcggtaccca 246 ||||||||| ||||||||||||||||| ||| ||| |||| ||||||||| ||||| Sbjct: 70261 cgacgccctgggtcgcttgctgccggc---gccccactccgcgttcatctgcggcaccca 70205 Query: 247 cagctcttgcctggcccgctcacccgcggcgacaaccacgccac 290 | |||| | ||||||||||| | ||||||||| | ||||||| Sbjct: 70204 ccgctcgcggctggcccgctcgtcggcggcgacagcgacgccac 70161 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 447 tctccactagatattatcctgacaccctggtc 478 ||||||| ||||||||||||||||||||||| Sbjct: 69573 tctccacaggatattatcctgacaccctggtc 69542
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.002 Identities = 85/104 (81%), Gaps = 3/104 (2%) Strand = Plus / Minus Query: 187 cgacgccctaggtcgcttgctgccggcccaccccgcctctgcgtgcatctgcggtaccca 246 ||||||||| ||||||||||||||||| ||| ||| |||| ||||||||| ||||| Sbjct: 27002560 cgacgccctgggtcgcttgctgccggc---gccccactccgcgttcatctgcggcaccca 27002504 Query: 247 cagctcttgcctggcccgctcacccgcggcgacaaccacgccac 290 | |||| | ||||||||||| | ||||||||| | ||||||| Sbjct: 27002503 ccgctcgcggctggcccgctcgtcggcggcgacagcgacgccac 27002460 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 447 tctccactagatattatcctgacaccctggtc 478 ||||||| ||||||||||||||||||||||| Sbjct: 27001872 tctccacaggatattatcctgacaccctggtc 27001841 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ctactactagtactagtact 132 |||||||||||||||||||| Sbjct: 35215379 ctactactagtactagtact 35215398
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 114 tactactagtactagtactagtactggtac 143 ||||||||||||||||||||||||| |||| Sbjct: 13633337 tactactagtactagtactagtactagtac 13633366 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagtact 138 |||||||||||||||||||||| Sbjct: 13633365 tactagtactagtactagtact 13633344 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 13633359 tactagtactagtactagta 13633340
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021N09 Length = 156565 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 114 tactactagtactagtactagtactggtac 143 ||||||||||||||||||||||||| |||| Sbjct: 40670 tactactagtactagtactagtactagtac 40699 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagtact 138 |||||||||||||||||||||| Sbjct: 40698 tactagtactagtactagtact 40677 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 40692 tactagtactagtactagta 40673
>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0459H02 Length = 168230 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 114 tactactagtactagtactagtactggtac 143 ||||||||||||||||||||||||| |||| Sbjct: 161827 tactactagtactagtactagtactagtac 161856 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagtact 138 |||||||||||||||||||||| Sbjct: 161855 tactagtactagtactagtact 161834 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 161849 tactagtactagtactagta 161830
>dbj|AK061333.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-A11, full insert sequence Length = 1220 Score = 52.0 bits (26), Expect = 0.002 Identities = 85/104 (81%), Gaps = 3/104 (2%) Strand = Plus / Minus Query: 187 cgacgccctaggtcgcttgctgccggcccaccccgcctctgcgtgcatctgcggtaccca 246 ||||||||| ||||||||||||||||| ||| ||| |||| ||||||||| ||||| Sbjct: 929 cgacgccctgggtcgcttgctgccggc---gccccactccgcgttcatctgcggcaccca 873 Query: 247 cagctcttgcctggcccgctcacccgcggcgacaaccacgccac 290 | |||| | ||||||||||| | ||||||||| | ||||||| Sbjct: 872 ccgctcgcggctggcccgctcgtcggcggcgacagcgacgccac 829
>gb|AC105905.10| Mus musculus chromosome 7, clone RP24-79I18, complete sequence Length = 215285 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 |||||||||||||||||||||||||| Sbjct: 140290 ctactactagtactagtactagtact 140315 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtactggtact 144 ||||||||| |||||||||||||||| ||||| Sbjct: 140284 ctactactactactagtactagtactagtact 140315 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 140313 tactagtactagtactagta 140294
>gb|AC107860.12| Mus musculus chromosome 7, clone RP23-21P17, complete sequence Length = 182673 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 |||||||||||||||||||||||||| Sbjct: 53993 ctactactagtactagtactagtact 54018 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtactggtact 144 ||||||||| |||||||||||||||| ||||| Sbjct: 53987 ctactactactactagtactagtactagtact 54018 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 54016 tactagtactagtactagta 53997
>emb|AL672239.8| Mouse DNA sequence from clone RP23-144D15 on chromosome 2, complete sequence Length = 204959 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 |||||||||||||||||||||||||| Sbjct: 98417 ctactactagtactagtactagtact 98442 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 114 tactactagtactagtactagtactggtact 144 |||||||| |||||||||||||||| ||||| Sbjct: 98412 tactactactactagtactagtactagtact 98442 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 98440 tactagtactagtactagta 98421
>gb|AC105256.7| Mus musculus BAC clone RP23-413O13 from chromosome 8, complete sequence Length = 210086 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 114 tactactagtactagtactagtact 138 ||||||||||||||||||||||||| Sbjct: 169994 tactactagtactagtactagtact 170018 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 170016 tactagtactagtactagta 169997
>emb|Z99292.1|SPAC17A2 S.pombe chromosome I cosmid c17A2 Length = 36642 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtactggtact 144 ||||||||||||||| ||||| |||||||||| Sbjct: 24590 ctactactagtactattactattactggtact 24559
>gb|U31026.1|HSU31026 Hordeum spontaneum Nevo 03-331 5S rRNA genes, clone HSPO016, partial sequence Length = 455 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtactggtact 144 ||||||||||||||||||||| |||| ||||| Sbjct: 294 ctactactagtactagtactactactagtact 263 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||| |||||||||||||||| Sbjct: 300 ctactactactactagtactagtact 275 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtactggtact 144 ||||||||||||||| ||||| |||| ||||| Sbjct: 312 ctactactagtactactactactactagtact 281
>ref|XM_639002.1| Dictyostelium discoideum hypothetical protein (DDB0217527), partial mRNA Length = 5304 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 120 tagtactagtactagtactggtactgg 146 |||||||||||||||||||||| |||| Sbjct: 1057 tagtactagtactagtactggtgctgg 1031 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtactgg 146 |||||||||||||||| || |||||||||| Sbjct: 1054 tactagtactagtactggtgctggtactgg 1025
>ref|XM_712023.1| Candida albicans SC5314 hypothetical protein (CaO19_5313), mRNA Length = 2505 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagt 135 ||||||||||||||||||||||| Sbjct: 62 ctactactagtactagtactagt 40
>ref|XM_711944.1| Candida albicans SC5314 hypothetical protein (CaO19_12773), mRNA Length = 2508 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagt 135 ||||||||||||||||||||||| Sbjct: 62 ctactactagtactagtactagt 40 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 actactagtactagtactagtact 138 ||||||| |||||||||||||||| Sbjct: 66 actactactactagtactagtact 43
>ref|XM_706697.1| Candida albicans SC5314 hypothetical protein (CaO19.8317), mRNA Length = 1485 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 116 ctactagtactagtactagtact 138 ||||||||||||||||||||||| Sbjct: 350 ctactagtactagtactagtact 328 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 330 tactagtactagtactagta 349
>ref|XM_706679.1| Candida albicans SC5314 hypothetical protein (CaO19.698), mRNA Length = 1485 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 116 ctactagtactagtactagtact 138 ||||||||||||||||||||||| Sbjct: 350 ctactagtactagtactagtact 328 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 330 tactagtactagtactagta 349
>gb|AC108359.4| Homo sapiens chromosome X clone RP11-467P22, complete sequence Length = 189224 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 112 gctactactagtactagtactagtact 138 |||||||||||||||||||||| |||| Sbjct: 74592 gctactactagtactagtactactact 74618
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtac 143 |||||||||| |||||||||||||||| Sbjct: 27386665 tactagtactggtactagtactggtac 27386639
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtac 143 |||||||||| |||||||||||||||| Sbjct: 6488203 tactagtactggtactagtactggtac 6488229 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 gctactactagtactagtact 132 ||||||||||||||||||||| Sbjct: 13681453 gctactactagtactagtact 13681433
>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence Length = 405682 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 120 tagtactagtactagtactggtactgg 146 |||||||||||||||||||||| |||| Sbjct: 332271 tagtactagtactagtactggtgctgg 332297 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtactgg 146 |||||||||||||||| || |||||||||| Sbjct: 332274 tactagtactagtactggtgctggtactgg 332303
>dbj|AP005705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0453B09 Length = 173688 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtac 143 |||||||||| |||||||||||||||| Sbjct: 154280 tactagtactggtactagtactggtac 154306
>ref|XM_638382.1| Dictyostelium discoideum hypothetical protein (DDB0202514), partial mRNA Length = 2532 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 ||||||| |||||||||||||||||| Sbjct: 1547 ctactacgagtactagtactagtact 1572
>ref|XM_631367.1| Dictyostelium discoideum hypothetical protein (DDB0219395), partial mRNA Length = 1833 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||||||||| |||| Sbjct: 749 ctactactagtactagtactactact 774 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 ||||||||| |||||||||||||||| Sbjct: 743 ctactactactactagtactagtact 768
>gb|AY112746.1| Pfiesteria piscicida small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 6434 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 |||||| ||||||||||||||||||| Sbjct: 79 ctactagtagtactagtactagtact 54 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagta 136 ||||||||||||||| |||||||| Sbjct: 94 ctactactagtactactactagta 71 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtact 144 ||||||||||||||||| ||||| |||| Sbjct: 69 tactagtactagtactactactgctact 42
>gb|AY423146.1| Epithema benthamii isolate DNA-CW15 Gcyc2 protein (Gcyc2) gene, partial cds Length = 564 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 tactactagtactagtactagt 135 |||||||||||||||||||||| Sbjct: 93 tactactagtactagtactagt 114
>gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, complete sequence Length = 184327 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagtact 138 |||||||||||||||||||||| Sbjct: 111852 tactagtactagtactagtact 111831 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 111833 tactagtactagtactagta 111852
>ref|XM_717075.1| Candida albicans SC5314 hypothetical protein (CaO19_4958), mRNA Length = 1575 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 tactagtactagtactagtact 138 |||||||||||||||||||||| Sbjct: 1095 tactagtactagtactagtact 1116 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagtact 138 |||||||||||||||||||||| Sbjct: 1114 tactagtactagtactagtact 1093 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 120 tagtactagtactagtactggtact 144 ||||||||||||||||||| ||||| Sbjct: 1117 tagtactagtactagtactagtact 1093 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 agtactagtactagtactggtact 144 |||||||||||||||||| ||||| Sbjct: 1093 agtactagtactagtactagtact 1116
>gb|AC128671.4| Mus musculus BAC clone RP23-247F12 from 18, complete sequence Length = 172016 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 115 actactagtactagtactagtactggtact 144 ||||||||||||||||||| |||| ||||| Sbjct: 47918 actactagtactagtactactactagtact 47889 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||||||||| |||| Sbjct: 47902 ctactactagtactagtactactact 47877 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtact 144 |||||||||||||| ||||||| ||||| Sbjct: 47885 tactagtactagtagtagtactagtact 47912 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtact 144 ||||||||||| |||||||||| ||||| Sbjct: 47910 tactagtactactactagtactagtact 47883
>ref|XM_961186.1| Plasmodium falciparum 3D7 hypothetical protein (PFF1440w) partial mRNA Length = 20286 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||| |||||||||||||||| Sbjct: 2774 ctactactattactagtactagtact 2749
>gb|AC157555.9| Mus musculus chromosome 5, clone RP24-221I6, complete sequence Length = 149599 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 tactactagtactagtactagtactg 139 |||||||||||||||||||| ||||| Sbjct: 53157 tactactagtactagtactactactg 53132
>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5 Length = 337203 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||| |||||||||||||||| Sbjct: 179240 ctactactattactagtactagtact 179215
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||| |||||||||| Sbjct: 807140 ctactactagtactactactagtact 807115
>emb|BX295539.1|NCB1D14 Neurospora crassa genomic DNA, BAC contig B1D14 Length = 138898 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagtact 138 |||||||||||||||||||||| Sbjct: 45792 tactagtactagtactagtact 45771 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ctactactagtactagtacta 133 ||||||||||||||||||||| Sbjct: 45799 ctactactagtactagtacta 45819 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 tactagtactagtactagtac 137 ||||||||||||||||||||| Sbjct: 45773 tactagtactagtactagtac 45793 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tagtactagtactagtactggtac 143 ||||||||||||||||||| |||| Sbjct: 45770 tagtactagtactagtactagtac 45793
>emb|BX284749.1|NCB10C3 Neurospora crassa DNA linkage group II BAC clone B10C3 Length = 71352 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtactgg 146 |||||||||||||||||||| | ||||||| Sbjct: 29391 tactagtactagtactagtattagtactgg 29420 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagtact 138 |||||||||||||||||||||| Sbjct: 29410 tactagtactagtactagtact 29389 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 actagtactagtactagtact 138 ||||||||||||||||||||| Sbjct: 29386 actagtactagtactagtact 29406 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtact 144 ||||| |||||||||||||||| ||||| Sbjct: 29416 tactaatactagtactagtactagtact 29389 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtact 144 |||||| ||||||||||||||| ||||| Sbjct: 29379 tactagcactagtactagtactagtact 29406
>emb|AJ459419.1|TRU459419 Takifugu rubripes cacng5 gene, prkca gene and putative LINE-like retrotransposon, cosmids C012B17 and C123B01 Length = 64219 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||| |||||||||| Sbjct: 55517 ctactactagtactactactagtact 55492
>emb|CR354380.7| Zebrafish DNA sequence from clone CH211-182L2 in linkage group 1, complete sequence Length = 165344 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||| |||||||||| Sbjct: 72867 ctactactagtactactactagtact 72842 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtactggtactg 145 |||||||||||||| |||||||||| |||||| Sbjct: 72855 ctactactagtacttctactagtactagtactg 72823
>emb|BX005068.13| Zebrafish DNA sequence from clone DKEY-40H17 in linkage group 1, complete sequence Length = 215007 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||| |||||||||| Sbjct: 158184 ctactactagtactactactagtact 158209 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtactggtactg 145 |||||||||||||| |||||||||| |||||| Sbjct: 158196 ctactactagtacttctactagtactagtactg 158228
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||||||||| |||| Sbjct: 7121336 ctactactagtactagtactactact 7121311 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 7300526 ctagtactagtactagtact 7300545 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtactggtact 144 |||||| |||||||||||||| |||| ||||| Sbjct: 7121354 ctactagtagtactagtactactactagtact 7121323 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtact 144 |||||||||||||| ||||||| ||||| Sbjct: 7121319 tactagtactagtagtagtactagtact 7121346 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtact 144 ||||||||||| |||||||||| ||||| Sbjct: 7121344 tactagtactactactagtactagtact 7121317
>gb|AC007769.3|AC007769 Drosophila melanogaster, chromosome 3R, region 88F-88F, BAC clone BACR17K19, complete sequence Length = 167918 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtactgg 146 |||||||||| ||||| ||||||||||||| Sbjct: 94764 tactagtactggtactggtactggtactgg 94793 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 gtactagtactagtactggtactgg 146 ||||||||||| ||||||||||||| Sbjct: 94763 gtactagtactggtactggtactgg 94787
>gb|AC171128.2| Helobdella robusta clone CH306-1A10, complete sequence Length = 76716 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||| |||||||||| Sbjct: 11013 ctactactagtactactactagtact 10988
>gb|AC019185.8| Homo sapiens BAC clone RP11-299P7 from 2, complete sequence Length = 172349 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||||||||| |||| Sbjct: 19806 ctactactagtactagtactactact 19831 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ctactactagtactagtacta 133 ||||||||||||||||||||| Sbjct: 19779 ctactactagtactagtacta 19799 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtactggtact 144 |||||||||||||||| |||| |||| ||||| Sbjct: 19722 ctactactagtactagcactactactagtact 19753
>gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence Length = 182870 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtact 138 ||||||| |||||||||||||||||| Sbjct: 179592 ctactacgagtactagtactagtact 179617
>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence Length = 155354 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 |||||||||||||||||| ||||||| Sbjct: 15409 ctactactagtactagtagtagtact 15384 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagta 136 ||||||||| |||||||||||||| Sbjct: 15415 ctactactactactagtactagta 15392 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagta 136 |||||||||||||||||| ||||| Sbjct: 15388 ctactactagtactagtagtagta 15411
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||||||||| |||| Sbjct: 148025 ctactactagtactagtactactact 148000 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtactggtact 144 |||||| |||||||||||||| |||| ||||| Sbjct: 148043 ctactagtagtactagtactactactagtact 148012 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtact 144 |||||||||||||| ||||||| ||||| Sbjct: 148008 tactagtactagtagtagtactagtact 148035 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtact 144 ||||||||||| |||||||||| ||||| Sbjct: 148033 tactagtactactactagtactagtact 148006
>gb|AC150431.2| Branchiostoma floridae clone CH302-9B19, complete sequence Length = 172975 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||| |||||||||||||||| Sbjct: 151065 ctactactactactagtactagtact 151040
>gb|AE003709.4| Drosophila melanogaster chromosome 3R, section 47 of 118 of the complete sequence Length = 222815 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 117 tactagtactagtactagtactggtactgg 146 |||||||||| ||||| ||||||||||||| Sbjct: 2787 tactagtactggtactggtactggtactgg 2816 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 gtactagtactagtactggtactgg 146 ||||||||||| ||||||||||||| Sbjct: 2786 gtactagtactggtactggtactgg 2810
>gb|U31025.1|HSU31025 Hordeum spontaneum Nevo 03-331 5S rRNA genes, clone HSPO015, partial sequence Length = 507 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtact 138 ||||||||||||||| |||||||||| Sbjct: 430 ctactactagtactactactagtact 405 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 tactactagtactagtactagtact 138 |||||||||||||| |||||||||| Sbjct: 408 tactactagtactactactagtact 384 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagtactggtact 144 ||||||||| ||||||||||| |||| ||||| Sbjct: 436 ctactactactactagtactactactagtact 405
>gb|AC171909.2| Capitella capitata clone JGIBGZA-9H1, complete sequence Length = 33412 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtactgg 146 |||| ||||| ||||||||||||||||||| Sbjct: 4314 tactggtactggtactagtactggtactgg 4285 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtactgg 146 |||| ||||||||||| ||||||||||||| Sbjct: 4308 tactggtactagtactggtactggtactgg 4279 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtact 144 |||||||||| ||||| ||||||||||| Sbjct: 4302 tactagtactggtactggtactggtact 4275 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 tactagtactagtactggtactgg 146 |||||||||| ||||||||||||| Sbjct: 4086 tactagtactggtactggtactgg 4063
>gb|CP000189.1| Drosophila melanogaster genomic scaffold 211000022280229 Length = 169547 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagtact 138 |||||||||||||||||||||| Sbjct: 169511 tactagtactagtactagtact 169490 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 actagtactagtactagtact 138 ||||||||||||||||||||| Sbjct: 169487 actagtactagtactagtact 169507 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 169492 tactagtactagtactagta 169511 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtact 144 ||||| |||||||||||||||| ||||| Sbjct: 169517 tactaatactagtactagtactagtact 169490
>ref|XM_642533.1| Dictyostelium discoideum hypothetical protein (DDB0189846), partial mRNA Length = 2457 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctactactagtactagtacta 133 ||||||||||||||||||||| Sbjct: 452 ctactactagtactagtacta 432 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctactactagtactagtacta 133 ||||||||||||||||||||| Sbjct: 428 ctactactagtactagtacta 408
>gb|DQ410263.1| HIV-1 isolate H22v2ed1 from USA envelope glycoprotein (env) gene, complete cds Length = 2589 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctactactagtactagtacta 133 ||||||||||||||||||||| Sbjct: 467 ctactactagtactagtacta 447 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagta 136 |||||| ||||||||||||||||| Sbjct: 440 ctactattagtactagtactagta 463
>ref|XM_706870.1| Candida albicans SC5314 hypothetical protein (CaO19.4469), mRNA Length = 378 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 actagtactagtactagtact 138 ||||||||||||||||||||| Sbjct: 309 actagtactagtactagtact 289 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 287 ctagtactagtactagtact 306
>ref|XM_706846.1| Candida albicans SC5314 hypothetical protein (CaO19.11950), mRNA Length = 876 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 actagtactagtactagtact 138 ||||||||||||||||||||| Sbjct: 807 actagtactagtactagtact 787 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 785 ctagtactagtactagtact 804
>gb|AY811154.1| Schistosoma japonicum SJCHGC04138 protein mRNA, partial cds Length = 1272 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctactactagtactagtacta 133 ||||||||||||||||||||| Sbjct: 629 ctactactagtactagtacta 609
>gb|AC122341.3| Mus musculus BAC clone RP23-355F8 from chromosome 15, complete sequence Length = 198612 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 tcattttctcatcttatctgatttt 98 ||||||||||||||||| ||||||| Sbjct: 161563 tcattttctcatcttatttgatttt 161539
>gb|AC161448.4| Mus musculus BAC clone RP24-149K9 from chromosome 6, complete sequence Length = 190414 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 114 tactactagtactagtactagtact 138 |||||||||||||| |||||||||| Sbjct: 61842 tactactagtactactactagtact 61866
>gb|DQ452534.1| Cucurbita pepo ISSR marker (AG)8C_1227 genomic sequence Length = 1227 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 actactagtactagtactagt 135 ||||||||||||||||||||| Sbjct: 260 actactagtactagtactagt 280
>emb|AL132996.4|HSDJ45N11 Human DNA sequence from clone RP1-45N11 on chromosome 6q15-16.1, complete sequence Length = 99025 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 gctactactagtactagtactagtactggtact 144 |||||||||| ||||| ||||||||||| |||| Sbjct: 4583 gctactactactactactactagtactgctact 4615
>gb|AC115452.4| Rattus norvegicus 7 BAC CH230-309G3 (Children's Hospital Oakland Research Institute) complete sequence Length = 169133 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 tcattttctcatcttatctgatttt 98 ||||||||||||||||| ||||||| Sbjct: 32914 tcattttctcatcttatttgatttt 32938
>emb|X98487.1|LMPGKCG L.mexicana PGKC gene for glycosomal phosphoglycerate kinase Length = 1440 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ccttcttgctgccctcctccg 346 ||||||||||||||||||||| Sbjct: 424 ccttcttgctgccctcctccg 404
>emb|X98486.1|LMPGKBC L.mexicana PGKB gene for cytosolic phosphoglycerate kinase Length = 1254 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ccttcttgctgccctcctccg 346 ||||||||||||||||||||| Sbjct: 424 ccttcttgctgccctcctccg 404
>emb|X07459.1|CFGCPK Crithidia fasciculata gene C for phosphoglycerate kinase Length = 1533 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ccttcttgctgccctcctccg 346 ||||||||||||||||||||| Sbjct: 562 ccttcttgctgccctcctccg 542
>emb|X07458.1|CFGBPK Crithidia fasciculata gene B for phosphoglycerate kinase Length = 1459 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ccttcttgctgccctcctccg 346 ||||||||||||||||||||| Sbjct: 562 ccttcttgctgccctcctccg 542
>gb|DQ144993.1| Homo sapiens macrophage scavenger receptor 1 (MSR1) gene, complete cds Length = 88838 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 gctactactagtactagtactagtactggtact 144 |||| ||||||||||| |||||||||| ||||| Sbjct: 86554 gctattactagtactattactagtactagtact 86586 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 86531 ctagtactagtactagtact 86550
>emb|BX928758.9| Zebrafish DNA sequence from clone DKEY-206M15 in linkage group 25, complete sequence Length = 199974 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 tactactagtactagtactagtact 138 |||||||||||||||||||| |||| Sbjct: 51486 tactactagtactagtactactact 51462
>emb|BX470212.6| Zebrafish DNA sequence from clone CH211-229H7 in linkage group 14, complete sequence Length = 94121 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 ctactagtactagtactagtactgg 140 |||||||||||||||||| |||||| Sbjct: 78582 ctactagtactagtactactactgg 78558
>gb|AC090127.11| Mus musculus chromosome 6, clone RP23-128D23, complete sequence Length = 212404 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 tactactagtactagtactagtact 138 |||||||||||||| |||||||||| Sbjct: 137912 tactactagtactactactagtact 137888 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 tactactagtactagtactagtact 138 |||||||||||||| |||||||||| Sbjct: 105260 tactactagtactactactagtact 105236 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 tactactagtactagtactagtact 138 |||||||||||||| |||||||||| Sbjct: 41790 tactactagtactactactagtact 41766
>gb|AC023396.4| Homo sapiens chromosome 8, clone RP11-545M21, complete sequence Length = 165770 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 gctactactagtactagtactagtactggtact 144 |||| ||||||||||| |||||||||| ||||| Sbjct: 95476 gctattactagtactattactagtactagtact 95508
>gb|AF339905.1|AF339905S1 Leishmania major phosphoglycerate kinase B and phosphoglycerate kinase C genes, complete cds; and unknown genes Length = 26435 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ccttcttgctgccctcctccg 346 ||||||||||||||||||||| Sbjct: 3258 ccttcttgctgccctcctccg 3238 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ccttcttgctgccctcctccg 346 ||||||||||||||||||||| Sbjct: 592 ccttcttgctgccctcctccg 572
>ref|NM_138715.1| Homo sapiens macrophage scavenger receptor 1 (MSR1), transcript variant SR-AI, mRNA Length = 3682 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 gctactactagtactagtactagtactggtact 144 |||| ||||||||||| |||||||||| ||||| Sbjct: 3361 gctattactagtactattactagtactagtact 3393
>ref|NM_138716.1| Homo sapiens macrophage scavenger receptor 1 (MSR1), transcript variant SR-AIII, mRNA Length = 3493 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 gctactactagtactagtactagtactggtact 144 |||| ||||||||||| |||||||||| ||||| Sbjct: 3172 gctattactagtactattactagtactagtact 3204
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctactactagtactagtacta 133 ||||||||||||||||||||| Sbjct: 11922678 ctactactagtactagtacta 11922658 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtac 137 |||||||||||||||||| |||||| Sbjct: 10308393 ctactactagtactagtagtagtac 10308417
>gb|AF527603.1| Spodoptera littoralis nucleopolyhedrovirus Not I-D fragment ORF 1 gene, partial cds; ORF 2, ORF 3 (bro-a), ORF 4 (egt), ORF 5 (fgf), ORF 6, ORF 7 (pif), and ORF 8 genes, complete cds; and ORF 9 (lef-1) gene, partial cds Length = 8596 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ctactactagtactagtacta 133 ||||||||||||||||||||| Sbjct: 677 ctactactagtactagtacta 697
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtac 137 |||||||||||||||||| |||||| Sbjct: 15113 ctactactagtactagtagtagtac 15137
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1012D10 Length = 168267 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctactactagtactagtacta 133 ||||||||||||||||||||| Sbjct: 134963 ctactactagtactagtacta 134943
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 gctactactagtactagtact 132 ||||||||||||||||||||| Sbjct: 118869 gctactactagtactagtact 118849
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 gctactactagtactagtact 132 ||||||||||||||||||||| Sbjct: 79567 gctactactagtactagtact 79547
>dbj|D13264.1|HUMRMSR1 Homo sapiens mRNA for macrophage scavenger receptor type I, 3'untranslated region Length = 2204 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 gctactactagtactagtactagtactggtact 144 |||| ||||||||||| |||||||||| ||||| Sbjct: 1884 gctattactagtactattactagtactagtact 1916
>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5 Length = 130049 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtac 137 ||||||||| ||||||||||||||| Sbjct: 69943 ctactactaatactagtactagtac 69967
>gb|L25121.1|LEIGPGK Leishmania major glycosomal phosphoglycerate kinase (gPGK) gene, complete cds Length = 2250 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ccttcttgctgccctcctccg 346 ||||||||||||||||||||| Sbjct: 589 ccttcttgctgccctcctccg 569
>gb|L25120.1|LEICPGK Leishmania major cytosolic phosphoglycerate kinase (cPGK) gene, complete cds Length = 1750 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 ccttcttgctgccctcctccg 346 ||||||||||||||||||||| Sbjct: 589 ccttcttgctgccctcctccg 569
>gb|AC153822.13| Mus musculus 10 BAC RP23-56N1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217746 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 112 gctactactagtactagtactagtactggtact 144 |||||| ||||||||| ||||||||||| |||| Sbjct: 164308 gctactgctagtactactactagtactgctact 164276
>gb|BC073914.1| Homo sapiens SH3 domain containing ring finger 2, mRNA (cDNA clone IMAGE:5163966), complete cds Length = 1065 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ttcttgctgccctcctccgg 347 |||||||||||||||||||| Sbjct: 26 ttcttgctgccctcctccgg 7
>ref|XM_634932.1| Dictyostelium discoideum hypothetical protein (DDB0204210), partial mRNA Length = 3996 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagta 136 ||||||||||||||| |||||||| Sbjct: 3062 ctactactagtactactactagta 3039
>ref|XM_629686.1| Dictyostelium discoideum hypothetical protein (DDB0184314), partial mRNA Length = 2802 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagta 136 ||||||||| |||||||||||||| Sbjct: 569 ctactactactactagtactagta 546
>gb|AC006683.2| Caenorhabditis elegans cosmid T01C2, complete sequence Length = 17880 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 caactacatacagtactaaa 53 |||||||||||||||||||| Sbjct: 6468 caactacatacagtactaaa 6487
>gb|AC005216.1| Homo sapiens chromosome 5, BAC clone 282B7 (LBNL H192), complete sequence Length = 112088 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ttcttgctgccctcctccgg 347 |||||||||||||||||||| Sbjct: 46328 ttcttgctgccctcctccgg 46309
>gb|AC142268.4| Mus musculus BAC clone RP24-156E13 from chromosome 8, complete sequence Length = 145999 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tacatacagtactaaacaaa 57 |||||||||||||||||||| Sbjct: 13027 tacatacagtactaaacaaa 13008
>gb|DQ452068.1| Homo sapiens lipoprotein, Lp(a) (LPA) gene, complete cds Length = 136345 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 agtactagtactagtactggtactggaa 148 |||||| ||||| ||||||||||||||| Sbjct: 119742 agtactggtactggtactggtactggaa 119769
>ref|XM_717187.1| Candida albicans SC5314 hypothetical protein (CaO19_12423), mRNA Length = 1869 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 agtactagtactagtactggtact 144 ||||||||||||| |||||||||| Sbjct: 1387 agtactagtactaatactggtact 1410
>ref|XM_710505.1| Candida albicans SC5314 putative protein kinase (CaO19_10404), mRNA Length = 1272 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 996 tactagtactagtactagta 1015 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 1015 tactagtactagtactagta 996
>ref|XM_710449.1| Candida albicans SC5314 putative protein kinase (CaO19_2886), mRNA Length = 1272 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 996 tactagtactagtactagta 1015 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tactagtactagtactagta 136 |||||||||||||||||||| Sbjct: 1015 tactagtactagtactagta 996
>ref|XM_707430.1| Candida albicans SC5314 hypothetical protein (CaO19.10957), mRNA Length = 2910 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtactggaa 148 |||| ||||| ||||| ||||||||||||||| Sbjct: 2529 tactggtactggtactggtactggtactggaa 2498
>ref|XM_707400.1| Candida albicans SC5314 hypothetical protein (CaO19.3453), mRNA Length = 2910 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 117 tactagtactagtactagtactggtactggaa 148 |||| ||||| ||||| ||||||||||||||| Sbjct: 2529 tactggtactggtactggtactggtactggaa 2498
>gb|AC134546.4| Mus musculus BAC clone RP24-471H17 from chromosome 18, complete sequence Length = 208921 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 acagtactaaacaaaaaatt 62 |||||||||||||||||||| Sbjct: 168986 acagtactaaacaaaaaatt 169005
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 cttcttgctgccctcctccg 346 |||||||||||||||||||| Sbjct: 2739275 cttcttgctgccctcctccg 2739256
>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence Length = 205816 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagta 136 |||||||||||||||||| ||||| Sbjct: 87279 ctactactagtactagtagtagta 87302 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 ctactactagtactagtactagta 136 |||||||||||||||||| ||||| Sbjct: 87300 ctactactagtactagtagtagta 87277 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagta 136 ||||||||| |||||||||||||| Sbjct: 87273 ctactactactactagtactagta 87296
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 actacatacagtactaaaca 55 |||||||||||||||||||| Sbjct: 11747046 actacatacagtactaaaca 11747065 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 actacatacagtactaaaca 55 |||||||||||||||||||| Sbjct: 11742221 actacatacagtactaaaca 11742240
>gb|AC135086.3| Mus musculus BAC clone RP23-110L10 from chromosome 15, complete sequence Length = 225159 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atacagtactaaacaaaaaa 60 |||||||||||||||||||| Sbjct: 76650 atacagtactaaacaaaaaa 76631
>gb|AC121907.3| Mus musculus BAC clone RP24-176G20 from chromosome 8, complete sequence Length = 173427 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tacatacagtactaaacaaa 57 |||||||||||||||||||| Sbjct: 168797 tacatacagtactaaacaaa 168778
>gb|AC117250.3| Mus musculus BAC clone RP24-366A20 from 12, complete sequence Length = 125733 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 acagtactaaacaaaaaatt 62 |||||||||||||||||||| Sbjct: 72109 acagtactaaacaaaaaatt 72128
>gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete sequence Length = 231302 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 catgtcattttctcatctta 89 |||||||||||||||||||| Sbjct: 175380 catgtcattttctcatctta 175361
>gb|AC060834.8| Homo sapiens BAC clone RP11-671K16 from 7, complete sequence Length = 113686 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ggtgctggtggtctccactc 448 |||||||||||||||||||| Sbjct: 45013 ggtgctggtggtctccactc 45032
>gb|AY383615.1| Homo sapiens benzodiazapine receptor (peripheral) (BZRP) gene, complete cds Length = 13942 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 aggaggaggagccgagagac 187 |||||||||||||||||||| Sbjct: 442 aggaggaggagccgagagac 461
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcggcgacaaccacgccacc 291 |||||||||||||||||||| Sbjct: 61305 gcggcgacaaccacgccacc 61324
>emb|Z82214.23|HS526I14 Human DNA sequence from clone RP3-526I14 on chromosome 22, complete sequence Length = 129389 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 aggaggaggagccgagagac 187 |||||||||||||||||||| Sbjct: 5793 aggaggaggagccgagagac 5812
>emb|AL596089.19| Human DNA sequence from clone RP11-414A5 on chromosome 6 Contains the 3' end of the LPA gene for lipoprotein (Lp(a)) and a CpG island, complete sequence Length = 135751 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 agtactagtactagtactggtactggaa 148 |||||| ||||| ||||||||||||||| Sbjct: 31239 agtactggtactggtactggtactggaa 31212
>emb|AL445264.5| Human DNA sequence from clone RP11-475F14 on chromosome 13, complete sequence Length = 151454 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 gctactactagtactagtactagt 135 ||||||||||||| |||||||||| Sbjct: 13916 gctactactagtagtagtactagt 13939
>gb|AC044873.13| Homo sapiens chromosome 18, clone RP11-715C4, complete sequence Length = 179454 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttcatggtccatgtcatttt 80 |||||||||||||||||||| Sbjct: 35967 ttcatggtccatgtcatttt 35986
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 actacatacagtactaaaca 55 |||||||||||||||||||| Sbjct: 136141 actacatacagtactaaaca 136160 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 actacatacagtactaaaca 55 |||||||||||||||||||| Sbjct: 131316 actacatacagtactaaaca 131335
>ref|XM_971389.1| PREDICTED: Tribolium castaneum hypothetical protein LOC664363 (LOC664363), mRNA Length = 589 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 actagtactagtactagtac 137 |||||||||||||||||||| Sbjct: 455 actagtactagtactagtac 474
>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 2/10 Length = 349887 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 acccgcggcgacaaccacgccaccgatc 295 ||||||| ||| |||||||||||||||| Sbjct: 339739 acccgcgccgataaccacgccaccgatc 339712
>emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 2/8 Length = 341553 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 acaaccacgccaccgatcac 297 |||||||||||||||||||| Sbjct: 268546 acaaccacgccaccgatcac 268527
>gb|AC048351.18| Homo sapiens 3 BAC RP11-175P19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161687 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 agtactagtactggtactgg 146 |||||||||||||||||||| Sbjct: 25347 agtactagtactggtactgg 25366
>gb|AC108910.18| Mus musculus chromosome 18, clone RP24-550O15, complete sequence Length = 206978 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 acagtactaaacaaaaaatt 62 |||||||||||||||||||| Sbjct: 200260 acagtactaaacaaaaaatt 200241
>emb|BX927196.10| Zebrafish DNA sequence from clone DKEY-121D19 in linkage group 17, complete sequence Length = 84911 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagtactggtact 144 ||||||||| ||||||||||| |||| ||||| Sbjct: 3052 ctactactattactagtactactactagtact 3083
>gb|AC113169.2| Homo sapiens chromosome 3 clone RP11-322K13, complete sequence Length = 174293 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 139475 ctagtactagtactagtact 139456 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 139454 ctagtactagtactagtact 139473
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 cagctcttgcctggcccgct 266 |||||||||||||||||||| Sbjct: 1093658 cagctcttgcctggcccgct 1093677
>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182635 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 74956 ctagtactagtactagtact 74975
>gb|AF498409.1| Pseudomonas aeruginosa serotype 017 putative O-antigen biosynthesis gene cluster, partial sequence Length = 13518 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aggtcgcttgctgccggccc 215 |||||||||||||||||||| Sbjct: 10647 aggtcgcttgctgccggccc 10666
>gb|AF498402.1| Pseudomonas aeruginosa serotype 011 putative O-antigen biosynthesis gene cluster, partial sequence Length = 12953 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aggtcgcttgctgccggccc 215 |||||||||||||||||||| Sbjct: 10082 aggtcgcttgctgccggccc 10101
>gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187230 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 45080 ctagtactagtactagtact 45061
>gb|AC112213.2| Homo sapiens chromosome 3 clone RP11-223D18, complete sequence Length = 144201 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 35827 ctagtactagtactagtact 35808 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 35806 ctagtactagtactagtact 35825
>gb|AC016382.8| Homo sapiens, clone RP11-25I11, complete sequence Length = 153988 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 actacatacagtactaaaca 55 |||||||||||||||||||| Sbjct: 97250 actacatacagtactaaaca 97269
>gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, complete sequence Length = 174034 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ggtgctggtggtctccactc 448 |||||||||||||||||||| Sbjct: 44742 ggtgctggtggtctccactc 44723
>gb|AC025212.5|AC025212 Homo sapiens chromosome 18, clone RP11-289A1, complete sequence Length = 182258 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 actacatacagtactaaaca 55 |||||||||||||||||||| Sbjct: 19655 actacatacagtactaaaca 19636
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 actacatacagtactaaaca 55 |||||||||||||||||||| Sbjct: 11743809 actacatacagtactaaaca 11743828 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 actacatacagtactaaaca 55 |||||||||||||||||||| Sbjct: 11738984 actacatacagtactaaaca 11739003
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tactactagtactagtacta 133 |||||||||||||||||||| Sbjct: 26879069 tactactagtactagtacta 26879050 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 actactagtactagtactag 134 |||||||||||||||||||| Sbjct: 1801207 actactagtactagtactag 1801188
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 acccgcggcgacaaccacgccaccgatc 295 ||||||| ||| |||||||||||||||| Sbjct: 686287 acccgcgccgataaccacgccaccgatc 686260
>gb|AC018799.8| Homo sapiens BAC clone RP11-125N8 from 2, complete sequence Length = 151107 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 aactacatacagtactaaacaaaa 58 ||||||||||||||| |||||||| Sbjct: 27648 aactacatacagtacaaaacaaaa 27625
>gb|AC091887.3| Homo sapiens chromosome 5 clone RP11-118M9, complete sequence Length = 171095 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ttcttgctgccctcctccgg 347 |||||||||||||||||||| Sbjct: 34352 ttcttgctgccctcctccgg 34333
>gb|AF236052.1|AF236052 Pseudomonas aeruginosa integration host factor beta-subunit (himD), complete cds; serogroup O11 O-antigen biosynthesis locus, complete sequence; insertion element ISPa11A putative transposase, complete cds; insertion element ISPa11B putative transposase, complete cds; tRNA-Asn gene, complete sequence; and aromatic-amino-acid-aminotransferase (tyrB) gene, partial cds Length = 15351 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aggtcgcttgctgccggccc 215 |||||||||||||||||||| Sbjct: 10486 aggtcgcttgctgccggccc 10505
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 actactagtactagtactag 134 |||||||||||||||||||| Sbjct: 119219 actactagtactagtactag 119200
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tactactagtactagtacta 133 |||||||||||||||||||| Sbjct: 57612 tactactagtactagtacta 57593
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 27207 ctagtactagtactagtact 27226
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 141010 ctagtactagtactagtact 141029
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tactactagtactagtacta 133 |||||||||||||||||||| Sbjct: 145122 tactactagtactagtacta 145103
>emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, complete sequence Length = 167009 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagta 136 ||||||||||||||| |||||||| Sbjct: 143323 ctactactagtactactactagta 143346
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 actactagtactagtactag 134 |||||||||||||||||||| Sbjct: 37851 actactagtactagtactag 37832
>dbj|AK058046.1| Homo sapiens cDNA FLJ25317 fis, clone TST00194 Length = 1008 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ttcttgctgccctcctccgg 347 |||||||||||||||||||| Sbjct: 40 ttcttgctgccctcctccgg 21
>emb|BX255903.3| Zebrafish DNA sequence from clone CH211-242B18 in linkage group 20, complete sequence Length = 117796 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tactactagtactagtacta 133 |||||||||||||||||||| Sbjct: 108767 tactactagtactagtacta 108748
>emb|CT485668.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 100390 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagta 136 |||||||||||||||||| ||||| Sbjct: 9444 ctactactagtactagtagtagta 9467
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ctagtactagtactagtact 138 |||||||||||||||||||| Sbjct: 63897 ctagtactagtactagtact 63916
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ctactactagtactagtact 132 |||||||||||||||||||| Sbjct: 11225 ctactactagtactagtact 11244
>emb|AL928852.7| Zebrafish DNA sequence from clone CH211-287A12, complete sequence Length = 157466 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 ctactactagtactagtactagta 136 |||||||||||| ||||||||||| Sbjct: 149238 ctactactagtaatagtactagta 149261
>emb|AL731829.10| Mouse DNA sequence from clone RP23-383P24 on chromosome 4 Contains part of the Astn2 gene for astrotactin 2 and a CpG island, complete sequence Length = 199452 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 catgtcattttctcatctta 89 |||||||||||||||||||| Sbjct: 41325 catgtcattttctcatctta 41306
>emb|Z78786.1|HSPA16G8 H.sapiens flow-sorted chromosome 6 HindIII fragment, SC6pA16G8 Length = 531 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 agtactagtactagtactggtactggaa 148 |||||| ||||| ||||||||||||||| Sbjct: 99 agtactggtactggtactggtactggaa 72
>dbj|AP000915.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-720L2, complete sequences Length = 188439 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 acccacagctcttgcctggc 261 |||||||||||||||||||| Sbjct: 157153 acccacagctcttgcctggc 157172 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,786,597 Number of Sequences: 3902068 Number of extensions: 4786597 Number of successful extensions: 87671 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86135 Number of HSP's gapped (non-prelim): 1459 length of query: 526 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 503 effective length of database: 17,143,297,704 effective search space: 8623078745112 effective search space used: 8623078745112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
