ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LEP_RICCN (Q92JB1) Signal peptidase I (EC 3.4.21.89) (SPase I) (... 28 6.1

>LEP_RICCN (Q92JB1) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader|
           peptidase I)
          Length = 266

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 109 FTDRYEILFAFWVPQPPFHCLSRRHFDQKGTTINQGQKGAEKCPAKSRFAW 261
           + DRY     F+VP+  +  L         + +N G    E   AK++F W
Sbjct: 174 YNDRYSNTDVFYVPEGQYFFLGDNRDQSNDSRVNLGFVPFENFIAKAQFIW 224


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,490,740
Number of Sequences: 219361
Number of extensions: 704813
Number of successful extensions: 1820
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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