>gb|AF291049.1| Mus musculus RNA adenosine deaminase 2 (Adarb1) mRNA, complete cds,
           alternatively spliced
          Length = 2681

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 309 cccaaggacagcagcacacctg 330

>gb|AF403109.2| Mus musculus adenosine deaminase (Adarb1) mRNA, complete cds,
           alternatively spliced
          Length = 6587

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 473 cccaaggacagcagcacacctg 494

>gb|AF403108.2| Mus musculus adenosine deaminase (Adarb1) mRNA, complete cds,
           alternatively spliced
          Length = 6557

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 473 cccaaggacagcagcacacctg 494

>gb|AF403107.2| Mus musculus adenosine deaminase (Adarb1) mRNA, complete cds,
           alternatively spliced
          Length = 6540

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 426 cccaaggacagcagcacacctg 447

>gb|AF403106.2| Mus musculus adenosine deaminase (Adarb1) mRNA, complete cds,
           alternatively spliced
          Length = 6510

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 426 cccaaggacagcagcacacctg 447

>gb|AF525421.1| Mus musculus adenosine deaminase ADAR2 mRNA, complete cds;
           alternatively spliced
          Length = 6917

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 499 cccaaggacagcagcacacctg 520

>ref|NM_001024837.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 2, mRNA
          Length = 6619

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 474 cccaaggacagcagcacacctg 495

>ref|NM_130895.2| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 1, mRNA
          Length = 6589

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 474 cccaaggacagcagcacacctg 495

>ref|NM_001024838.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 3, mRNA
          Length = 6662

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 547 cccaaggacagcagcacacctg 568

>ref|NM_001024840.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 4, mRNA
          Length = 6665

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 520 cccaaggacagcagcacacctg 541

>ref|NM_001024839.1| Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1),
           transcript variant 5, mRNA
          Length = 6635

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 520 cccaaggacagcagcacacctg 541

>dbj|AK138318.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230065F14 product:adenosine
           deaminase, RNA-specific, B1, full insert sequence
          Length = 2578

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 467 cccaaggacagcagcacacctg 488

>dbj|AK141777.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030063D19 product:adenosine
           deaminase, RNA-specific, B1, full insert sequence
          Length = 3016

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 446 cccaaggacagcagcacacctg 467

>dbj|AK147298.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:M5C1010E10 product:adenosine deaminase,
           RNA-specific, B1, full insert sequence
          Length = 6664

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 553 cccaaggacagcagcacacctg 574

>gb|BC051107.1| Mus musculus adenosine deaminase, RNA-specific, B1, mRNA (cDNA
           clone IMAGE:5361440), containing frame-shift errors
          Length = 2585

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 459 cccaaggacagcagcacacctg 480

>gb|U73197.1|HSU73197 Homo sapiens RNA adenosine deaminase (RED1) mRNA, complete cds
          Length = 2136

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 79  cccaaggacagcagcacacctg 100

>gb|AY162454.1| Mus musculus adenosine deaminase (Adarb1) mRNA, complete cds,
           alternatively spliced
          Length = 6583

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 12  cccaaggacagcagcacacctg 33
           ||||||||||||||||||||||
Sbjct: 499 cccaaggacagcagcacacctg 520

>gb|AC155176.6| Mus musculus 10 BAC RP24-219F17 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 186725

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 12    cccaaggacagcagcacacctg 33
             ||||||||||||||||||||||
Sbjct: 84304 cccaaggacagcagcacacctg 84325

>gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence
          Length = 186611

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     cccaaggacagcagcacacc 31
              ||||||||||||||||||||
Sbjct: 170020 cccaaggacagcagcacacc 170039

>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 12      cccaaggacagcagcacacc 31
               ||||||||||||||||||||
Sbjct: 2056080 cccaaggacagcagcacacc 2056099

>gb|AY644518.1| Bos taurus T cell receptor gamma gene, partial sequence
          Length = 188109

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    cccaaggacagcagcacacc 31
             ||||||||||||||||||||
Sbjct: 18721 cccaaggacagcagcacacc 18740

>ref|NM_012894.1| Rattus norvegicus adenosine deaminase, RNA-specific, B1 (Adarb1),
           mRNA
          Length = 2789

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 12  cccaaggacagcagcacacc 31
           ||||||||||||||||||||
Sbjct: 198 cccaaggacagcagcacacc 217

>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome
          Length = 351911

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    atgccccgcaaaatctcggt 253
              ||||||||||||||||||||
Sbjct: 127642 atgccccgcaaaatctcggt 127661

>emb|AL669970.10| Human DNA sequence from clone RP11-473E2 on chromosome 9, complete
             sequence
          Length = 169247

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 212   aaggccaaaaaggggcggaaaaatgccc 239
             |||||||||| ||||| |||||||||||
Sbjct: 81802 aaggccaaaatggggcagaaaaatgccc 81829

>gb|U43534.1|RNU43534 Rattus norvegicus double-stranded RNA-specific editase (RED1) mRNA,
           complete cds
          Length = 2789

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 12  cccaaggacagcagcacacc 31
           ||||||||||||||||||||
Sbjct: 198 cccaaggacagcagcacacc 217

>emb|AL732485.8| Mouse DNA sequence from clone RP23-70G24 on chromosome 2, complete
             sequence
          Length = 92562

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   tcctcaacctccgttccact 166
             ||||||||||||||||||||
Sbjct: 26274 tcctcaacctccgttccact 26293


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,140,735
Number of Sequences: 3902068
Number of extensions: 2140735
Number of successful extensions: 31053
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31019
Number of HSP's gapped (non-prelim): 34
length of query: 271
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 249
effective length of database: 17,147,199,772
effective search space: 4269652743228
effective search space used: 4269652743228
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)