ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart40b05 |
|---|---|
| Clone Library Name | barley_pub |
>Y5621_ARATH (O81488) PHD finger protein At5g26210| Length = 255 Score = 102 bits (255), Expect = 6e-22 Identities = 42/56 (75%), Positives = 48/56 (85%) Frame = -2 Query: 530 ETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSKRPR 363 ET CG CG Y+A+EFWI CD+CE W+HGKCVKITPA+AE IKQYKCPSCS+KR R Sbjct: 199 ETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 254
>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 660 Score = 52.4 bits (124), Expect = 9e-07 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = -2 Query: 485 FWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSKRPR 363 F IGCD C W+HG C++IT A++I+++ C C K P+ Sbjct: 39 FMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPK 79
>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 656 Score = 52.4 bits (124), Expect = 9e-07 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = -2 Query: 485 FWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSKRPR 363 F IGCD C W+HG C++IT A++I+++ C C K P+ Sbjct: 39 FMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPK 79
>PHF8_HUMAN (Q9UPP1) PHD finger protein 8| Length = 1060 Score = 50.1 bits (118), Expect = 5e-06 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -2 Query: 500 YSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 Y F I CD+C+ W+HG CV + KA I Y CP+C Sbjct: 50 YDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 89
>PHF8_MOUSE (Q80TJ7) PHD finger protein 8| Length = 1023 Score = 50.1 bits (118), Expect = 5e-06 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -2 Query: 500 YSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 Y F I CD+C+ W+HG CV + KA I Y CP+C Sbjct: 14 YDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53
>PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)| Length = 1096 Score = 49.7 bits (117), Expect = 6e-06 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Frame = -2 Query: 500 YSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC------SSKRPRQ*QRPHGW 339 Y F I CD C+ W+HG CV + +A I Y CP+C S+ + ++ HG Sbjct: 14 YDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRTWHKHGP 73 Query: 338 GP 333 GP Sbjct: 74 GP 75
>K1718_MOUSE (Q3UWM4) Protein KIAA1718| Length = 940 Score = 49.3 bits (116), Expect = 8e-06 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -2 Query: 512 CGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSS 375 C Y F I CDVC+ W+HG CV + A I Y CP C++ Sbjct: 42 CRQPYDVNRFMIECDVCKDWFHGSCVGVEEHHAVDIDLYHCPDCAA 87
>K1718_HUMAN (Q6ZMT4) Protein KIAA1718| Length = 941 Score = 48.9 bits (115), Expect = 1e-05 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -2 Query: 512 CGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCS 378 C Y F I CD+C+ W+HG CV + A I Y CP+C+ Sbjct: 42 CRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCA 86
>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)| Length = 1101 Score = 47.4 bits (111), Expect = 3e-05 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -2 Query: 500 YSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 Y F I CD C+ W+HG CV + +A I Y CP+C Sbjct: 14 YDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNC 53
>JHD1_DEBHA (Q6BXJ4) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 514 Score = 45.8 bits (107), Expect = 9e-05 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCS 378 W+ CD+C +W+H C+KI + ++ Y C CS Sbjct: 26 WLQCDICNQWFHASCLKIPKIEVNNLHSYHCEGCS 60
>SPP1_SCHPO (O74508) Set1 complex component spp1 (Set1C component spp1)| (COMPASS component spp1) (Complex proteins associated with set1 protein spp1) Length = 424 Score = 44.7 bits (104), Expect = 2e-04 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -2 Query: 479 IGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSK 372 +GCD CE W+HG CV I + + QY CP C+ + Sbjct: 133 LGCDGCEDWFHGTCVNIPESYNDLTVQYFCPKCTEE 168
>LID2_SCHPO (Q9HDV4) Lid2 complex component lid2 (Lid2C component lid2)| Length = 1513 Score = 43.5 bits (101), Expect = 4e-04 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -2 Query: 479 IGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSK--RPRQ*QRP 348 I C++C WYH KC+K++ K +++ CP C + PR RP Sbjct: 1110 IECEICHEWYHAKCLKMSKKKLRQDEKFTCPICDYRVEIPRLSNRP 1155 Score = 43.1 bits (100), Expect = 6e-04 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -2 Query: 512 CGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 CG +S + +I C +CER +H CV + A+S+ ++ CP C Sbjct: 1357 CGEEFSPRDSFIDCTICERRFHYDCVGLNNEIADSVSKFTCPIC 1400
>MSC1_SCHPO (Q9UT79) Multicopy suppressor of chk1 protein 1| Length = 1588 Score = 43.1 bits (100), Expect = 6e-04 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = -2 Query: 479 IGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSK--RPRQ*QRP 348 I C++C WYH KC+K++ K + +++ CP C + PR RP Sbjct: 1185 IECELCHEWYHAKCMKMSKKKLRADEKFICPICDYRVEVPRHSHRP 1230 Score = 37.0 bits (84), Expect = 0.040 Identities = 13/47 (27%), Positives = 23/47 (48%) Frame = -2 Query: 512 CGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSK 372 C ++ + + C C W+H +CV ++ ++ Y CP C SK Sbjct: 1459 CRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYACPDCCSK 1505
>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (Fragments) Length = 1956 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 4/40 (10%) Frame = -2 Query: 485 FWIGCDVCERWYHGKCVKITPAKAESIKQ----YKCPSCS 378 F I CD CE W+HG CV I+ A+ +++ Y CP+C+ Sbjct: 278 FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 317
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 4/40 (10%) Frame = -2 Query: 485 FWIGCDVCERWYHGKCVKITPAKAESIKQ----YKCPSCS 378 F I CD CE W+HG CV I+ A+ +++ Y CP+C+ Sbjct: 281 FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 320
>PHF3_HUMAN (Q92576) PHD finger protein 3| Length = 2039 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESI----KQYKCPSCSSKRPRQ 360 CG C + F +GC C+ W+HG CV ++ ++A+ + K+Y C C ++ ++ Sbjct: 720 CGFCKKPHG-NRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKK 776
>ATX3_ARATH (Q9M364) Histone-lysine N-methyltransferase ATX3 (EC 2.1.1.43)| (Trithorax-homolog protein 3) (TRX-homolog protein 3) (Protein SET DOMAIN GROUP 14) Length = 902 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Frame = -2 Query: 533 SETLCGTCGGIY--SAEEFWIGCDVCERWYHGKCVKITPAKAESIK--QYKCPSC 381 S CG C I+ S + W+ CD C+ W H +C IT + + ++ Y CP C Sbjct: 347 SNQYCGICKRIWHPSDDGDWVCCDGCDVWVHAECDNITNERFKELEHNNYYCPDC 401
>JHD1_YARLI (Q6C423) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 510 Score = 40.4 bits (93), Expect = 0.004 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSKR 369 W CD C+RW H CV IT S +Y CP+C+ + Sbjct: 19 WTQCDGCDRWVHDVCVSIT--DPVSYAKYHCPTCTKTK 54
>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)| (Trithorax-homolog protein 5) (TRX-homolog protein 5) (Protein SET DOMAIN GROUP 29) Length = 1043 Score = 40.0 bits (92), Expect = 0.005 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Frame = -2 Query: 524 LCGTCGGIYSA--EEFWIGCDVCERWYHGKCVKITPAKAESIKQ--YKCPSCSSK 372 +CG C I++ + W+ CD C+ W H C +I+ + + + Y CP+C +K Sbjct: 415 VCGICKRIWNHLDSQSWVRCDGCKVWIHSACDQISHKHFKDLGETDYYCPTCRTK 469
>JHD1_CANAL (Q5A847) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 478 Score = 39.3 bits (90), Expect = 0.008 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSK 372 WI C C+ WYH C+ + + + I Y CP C K Sbjct: 32 WIQCSKCKVWYHVHCLDLPTDEIDQIVIYHCPECVPK 68
>JHD1_YEAST (P40034) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) (ScJHDM1) Length = 492 Score = 37.7 bits (86), Expect = 0.023 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 15/48 (31%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKIT---------------PAKAESIKQYKCPS 384 W+ CD C +W H KCV + P A+ IK Y+CP+ Sbjct: 21 WVKCDSCPQWVHVKCVPLKRIHYSNLTSSEVLSYPNSAKQIKSYRCPN 68
>CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6| (CYC8-TUP1-interacting protein 6) Length = 506 Score = 37.7 bits (86), Expect = 0.023 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = -2 Query: 530 ETLCGTCGGIYSAEE--FWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 ET C CG + + ++ F+I C+ C W HG CV IT A +Y C C Sbjct: 72 ETRC-ICGELDTPDDSGFFIQCEQCSSWQHGYCVSITQDNAPD--KYWCEQC 120
>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)| (Protein GYMNOS) Length = 1384 Score = 37.0 bits (84), Expect = 0.040 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -2 Query: 530 ETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSS 375 E C CG + + C+ C +H KC+ + P K S++ ++CP C S Sbjct: 49 ENACQACGESTNL----VSCNTCTYAFHAKCL-VPPLKDASVENWRCPECVS 95
>JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (SmcY protein)| (Histocompatibility Y antigen) (H-Y) Length = 1548 Score = 37.0 bits (84), Expect = 0.040 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 18/72 (25%) Frame = -2 Query: 524 LCG-TCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIK----------------QY 396 +CG C G+ S + CD+C W+HG+CV + P S++ ++ Sbjct: 1184 ICGQVCAGVESLQ-----CDLCHDWFHGQCVTV-PHLLSSVRASHTSSQLLAWWEWDTKF 1237 Query: 395 KCPSC-SSKRPR 363 CP C S+RPR Sbjct: 1238 LCPLCMRSRRPR 1249
>SPP1_YEAST (Q03012) COMPASS component SPP1 (Complex proteins associated with| SET1 protein SPP1) (Set1C component SPP1) (Suppressor of PRP protein 1) Length = 353 Score = 36.6 bits (83), Expect = 0.052 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = -2 Query: 488 EFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSS 375 E +GCD C+ W+H C+ I + + + CP C + Sbjct: 34 ELMVGCDGCDDWFHFTCLHIPEQFKDLVFSFYCPYCQA 71
>Y1342_ARATH (Q9C810) PHD finger protein At1g33420| Length = 697 Score = 36.2 bits (82), Expect = 0.068 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -2 Query: 512 CGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIK--QYKCPSCSSKRPRQ*QRPHG 342 CG E + CD C W+H +C+ I A A K ++C SK+P+Q ++ G Sbjct: 608 CGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELYSKKPKQSKKERG 666
>ATXR5_ARATH (Q8VZJ1) Histone-lysine N-methyltransferase ATXR5 (EC 2.1.1.43)| (Trithorax-related protein 5) (TRX-related protein 5) (Protein SET DOMAIN GROUP 15) Length = 352 Score = 36.2 bits (82), Expect = 0.068 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = -2 Query: 536 HSETLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSKRP 366 +S C CG +E + CD C+R +H KC++ + I + C CS +RP Sbjct: 62 YSNVTCEKCGSGEGDDELLL-CDKCDRGFHMKCLRPIVVRV-PIGTWLCVDCSDQRP 116
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 35.4 bits (80), Expect = 0.12 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Frame = -2 Query: 524 LCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQ------YKCPSCSSKRPR 363 LC C E + C C+RW H KC ++ E + Y C +C+ + P Sbjct: 1571 LCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 1630 Query: 362 Q 360 + Sbjct: 1631 E 1631 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 8/60 (13%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCV----KITPAKAESI----KQYKCPSCSSKRP 366 C CG + A + + C+ C YH +C+ P K + + K +C SC S P Sbjct: 1482 CHVCGRQHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCVRCKSCGSTTP 1541
>TCF19_PIG (Q9TSV4) Transcription factor 19 (Transcription factor SC1)| Length = 346 Score = 35.4 bits (80), Expect = 0.12 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 W+ CD C+ W+H CV + +A ++CP C Sbjct: 308 WVQCDGCDTWFHVACVGCS-IQAAKEADFRCPGC 340
>JAD1A_HUMAN (P29375) Jumonji/ARID domain-containing protein 1A| (Retinoblastoma-binding protein 2) (RBBP-2) Length = 1722 Score = 35.0 bits (79), Expect = 0.15 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 10/55 (18%) Frame = -2 Query: 497 SAEEFWIGCDVCERWYHGKCVKITPA---------KAESIKQYKCPSC-SSKRPR 363 +A F + C++C+ W+H CV + + +A+ +K + CP C S+RPR Sbjct: 1169 TASGFMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVK-FLCPLCMRSRRPR 1222
>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3| homolog (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) Length = 4903 Score = 34.7 bits (78), Expect = 0.20 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = -2 Query: 530 ETLCGTCGGIYSAE--EFWIGCDVCERWYHGKCVKITPAKAES--IKQYKCPSC 381 + LC CG Y E + + C++C+RW H +C K T + +S + Y C C Sbjct: 463 DNLCPFCGKCYHPELQKDMLHCNMCKRWVHLECDKPTDQELDSQLKEDYICMYC 516 Score = 33.1 bits (74), Expect = 0.58 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = -2 Query: 530 ETLCGTCGGI-YSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCS 378 + +C CG AE + C C + YH CV I K K ++C C+ Sbjct: 950 QDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKVVLSKGWRCLECT 1001 Score = 31.6 bits (70), Expect = 1.7 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCVKI-TPAKAESIKQ--YKCPSCSSKRP 366 C C Y E+ + C C+RW H C + T + E++ + C C P Sbjct: 1080 CPVCCRNYREEDLILQCRQCDRWMHAVCQNLNTEEEVENVADIGFDCSMCRPYMP 1134
>JHD1_EMENI (Q5AW75) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1407 Score = 34.7 bits (78), Expect = 0.20 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Frame = -2 Query: 533 SETLCGTCGGIY------SAEEFWIGCDVCERWYHGKCVKI-TPAKAESIKQYKCPSC 381 S+ C TC + + WI CD C+RW+H C + ++ ++ C +C Sbjct: 322 SQASCATCNLVRIPVDNEDQDVTWISCDGCKRWFHIVCAGFKNDRETRTVDKFICKTC 379
>TCF19_PANTR (Q7YR48) Transcription factor 19 (Transcription factor SC1)| Length = 345 Score = 34.3 bits (77), Expect = 0.26 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 W+ CD C+ W+H CV + +A ++CP C Sbjct: 307 WVQCDGCDVWFHVACVGCS-IQAAREADFRCPGC 339
>TCF19_MACMU (Q5TM48) Transcription factor 19| Length = 345 Score = 34.3 bits (77), Expect = 0.26 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 W+ CD C+ W+H CV + +A ++CP C Sbjct: 307 WVQCDGCDVWFHVACVGCS-IQAAREADFRCPGC 339
>TCF19_HUMAN (Q9Y242) Transcription factor 19 (Transcription factor SC1)| Length = 345 Score = 34.3 bits (77), Expect = 0.26 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 W+ CD C+ W+H CV + +A ++CP C Sbjct: 307 WVQCDGCDVWFHVACVGCS-IQAAREADFRCPGC 339
>JAD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (SmcX protein)| (Xe169 protein) Length = 1560 Score = 33.9 bits (76), Expect = 0.34 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 16/53 (30%) Frame = -2 Query: 473 CDVCERWYHGKCVKI-------------TPAKA--ESIKQYKCPSC-SSKRPR 363 CD+C+ W+HG+CV + +P A E ++ CP C S+RPR Sbjct: 1202 CDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPR 1254
>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)| Length = 3866 Score = 33.9 bits (76), Expect = 0.34 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 9/62 (14%) Frame = -2 Query: 524 LCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIK---------QYKCPSCSSK 372 LC C E + C C+RW H KC ++ + E + Y C +C+ + Sbjct: 1470 LCDKCYDDDDYESKMMQCGKCDRWVHSKCESLSGTEDEMYEILSNLPESVAYTCVNCTER 1529 Query: 371 RP 366 P Sbjct: 1530 HP 1531 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 8/60 (13%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCV----KITPAKAESI----KQYKCPSCSSKRP 366 C CG + A + + C+ C YH +C+ P K + + K +C SC S P Sbjct: 1381 CHVCGRQHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCVRCKSCGSTTP 1440
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3| homolog (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 33.9 bits (76), Expect = 0.34 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Frame = -2 Query: 530 ETLCGTCGGIYSAE--EFWIGCDVCERWYHGKCVKITPAKAES--IKQYKCPSC 381 + LC CG Y E + + C++C+RW H +C K T + ++ ++Y C C Sbjct: 464 DNLCPFCGKCYHPELQKDMLHCNMCKRWVHLECDKPTDHELDTQLKEEYICMYC 517 Score = 33.5 bits (75), Expect = 0.44 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -2 Query: 533 SETLCGTCGGI-YSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCS 378 ++ +C CG AE + C C + YH CV I K K ++C C+ Sbjct: 956 NQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKVVLSKGWRCLECT 1008 Score = 31.6 bits (70), Expect = 1.7 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCVKI-TPAKAESIKQ--YKCPSCSSKRP 366 C C Y E+ + C C+RW H C + T + E++ + C C P Sbjct: 1087 CPVCYRNYREEDLILQCRQCDRWMHAVCQNLNTEEEVENVADIGFDCSMCRPYMP 1141
>ZMY11_MOUSE (Q8R5C8) Zinc finger MYND domain-containing protein 11| Length = 562 Score = 33.5 bits (75), Expect = 0.44 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 473 CDVCERWYHGKCVKITPAKAESIKQYKCPSCSS 375 CD+C R YH KC+ +S ++CP C S Sbjct: 75 CDLCFRVYHSKCLSDEFRLRDSSSHWQCPVCRS 107
>YCHD_SCHPO (Q9Y7V2) Protein C645.13 in chromosome III| Length = 721 Score = 33.5 bits (75), Expect = 0.44 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSK 372 W+ CD C+ W H CV + A + + Y C C S+ Sbjct: 35 WVQCDGCDCWQHASCVGL--ADKDIPESYYCEVCHSR 69
>JAD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (SmcX protein)| (Xe169 protein) Length = 1554 Score = 33.5 bits (75), Expect = 0.44 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 16/53 (30%) Frame = -2 Query: 473 CDVCERWYHGKCVKI-------------TPAKA--ESIKQYKCPSC-SSKRPR 363 CD+C+ W+HG+CV + +P A E ++ CP C S+RPR Sbjct: 1202 CDLCQDWFHGRCVTVPRLLSSQRSSLPSSPLLAWWEWDTKFLCPLCMRSRRPR 1254
>JAD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (SmcY protein)| (Histocompatibility Y antigen) (H-Y) Length = 1539 Score = 33.5 bits (75), Expect = 0.44 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 16/53 (30%) Frame = -2 Query: 473 CDVCERWYHGKCVKI-------------TPAKA--ESIKQYKCPSC-SSKRPR 363 CD+C+ W+HG+CV + +P A E ++ CP C S+RPR Sbjct: 1189 CDLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSRRPR 1241
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 33.5 bits (75), Expect = 0.44 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Frame = -2 Query: 530 ETLCGTCGGI-YSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 + +C CG AE + C C + YH CV K +K ++C C Sbjct: 1102 QDMCVVCGSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKGWRCVEC 1152 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKC 438 C C Y E+ I C CERW H C Sbjct: 1232 CPICHAPYVEEDLLIQCRHCERWMHAGC 1259
>JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (SmcY protein)| Length = 1535 Score = 33.5 bits (75), Expect = 0.44 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 16/53 (30%) Frame = -2 Query: 473 CDVCERWYHGKCVKI-------------TPAKA--ESIKQYKCPSC-SSKRPR 363 CD+C+ W+HG+CV + +P A E ++ CP C S+RPR Sbjct: 1189 CDLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSRRPR 1241
>ZMY11_HUMAN (Q15326) Zinc finger MYND domain-containing protein 11 (Adenovirus| 5 E1A-binding protein) (BS69 protein) Length = 562 Score = 33.1 bits (74), Expect = 0.58 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 473 CDVCERWYHGKCVKITPAKAESIKQYKCPSCSS 375 CD+C R YH KC+ +S ++CP C S Sbjct: 75 CDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRS 107
>MLO2_SCHPO (Q09329) Protein mlo2| Length = 329 Score = 33.1 bits (74), Expect = 0.58 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Frame = -2 Query: 524 LCGTCGGIYSAEEFWIGCDVCERWYHGKCVK-----ITPAKAESIKQYKCPSCSSK 372 +C T + E C +CE W+H KC++ I AE+ + C CS K Sbjct: 124 ICDTVYNPETEEGTMFQCILCEDWFHEKCLQKTNKGIAIPDAETFEWLVCSECSEK 179
>SET4_YEAST (P42948) SET domain protein 4| Length = 560 Score = 32.7 bits (73), Expect = 0.75 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -2 Query: 512 CGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQ-YKCPSCSS 375 CG S +E +I C+ C+ W H C K++ IK+ + C C S Sbjct: 165 CGSSDSKDELFIQCNKCKTWQHKLCYAF--KKSDPIKRDFVCKRCDS 209
>CN130_HUMAN (Q8N806) Protein C14orf130| Length = 425 Score = 32.7 bits (73), Expect = 0.75 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -2 Query: 479 IGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSK 372 I C VCE W+HG+ + P ++ ++ C +C + Sbjct: 153 IQCVVCEDWFHGRHLGAIPPESGDFQEMVCQACMKR 188
>UHRF1_MOUSE (Q8VDF2) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Nuclear zinc finger protein Np95) (Nuclear protein 95) Length = 782 Score = 32.7 bits (73), Expect = 0.75 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 C CGG A E + CD C+ +H C+K ++ CPSC Sbjct: 323 CHVCGG-REAPEKQLLCDECDMAFHLYCLKPPLTSVPPEPEWYCPSC 368
>CN130_MOUSE (Q8BU04) Protein C14orf130 homolog| Length = 425 Score = 32.3 bits (72), Expect = 0.98 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -2 Query: 479 IGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 I C VCE W+HG+ + P ++ ++ C +C Sbjct: 153 IQCVVCEDWFHGRHLGAIPPESGDFQEMVCQAC 185
>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous| T-cell lymphoma associated antigen se14-3) (CTCL tumor antigen se14-3) (Zinc finger MYND domain containing protein 8) Length = 1186 Score = 32.0 bits (71), Expect = 1.3 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 Query: 473 CDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 C++C R YH KC+++T +E + CP C Sbjct: 103 CELCPRVYHAKCLRLT---SEPEGDWFCPEC 130
>TOP1_HELPY (P55991) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 736 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = -2 Query: 530 ETLCGTCGGI----YSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 + LC CGG +S ++ C+ + K +K TP E+I+ KCP C Sbjct: 613 QELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNAKETIEGVKCPEC 666
>TOP1_HELPJ (Q9ZMV7) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 736 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = -2 Query: 530 ETLCGTCGGI----YSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 + LC CGG +S ++ C+ + K +K TP E+I+ KCP C Sbjct: 613 QELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNAKETIEGVKCPEC 666
>JHD1_ASHGO (Q75AL5) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 486 Score = 31.6 bits (70), Expect = 1.7 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCVKIT-------PAKAESIKQYKCPSCSSKRPR 363 C C G W+ C+ C +W H +C+ P+++ I ++C + + R R Sbjct: 31 CVYCKGKME-HRMWVQCEACPQWVHVQCIPEECLSGGEYPSRSSDIAAFECSAHGTARAR 89
>YKI5_CAEEL (P46012) Hypothetical protein C01G6.5| Length = 952 Score = 31.2 bits (69), Expect = 2.2 Identities = 7/18 (38%), Positives = 13/18 (72%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKI 429 W+ C +C +W+H CV++ Sbjct: 886 WVSCSICNQWFHVWCVRL 903
>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 669 Score = 31.2 bits (69), Expect = 2.2 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = -2 Query: 506 GIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSK 372 G S E WI C C+ W+H C+ I + ++ C C ++ Sbjct: 84 GAASDRETWICCTHCKTWFH--CICIGLENPDDFSKWYCQPCITR 126
>INAR1_MOUSE (P33896) Interferon-alpha/beta receptor alpha chain precursor| (IFN-alpha-REC) Length = 590 Score = 31.2 bits (69), Expect = 2.2 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +3 Query: 291 SKVSTXXXXXXXSSRPPSVGALLLPRSLGAAAWAFVLLYALRLRWSYLHALAMVPPL 461 +K S +RP S + + LG ++ ++LYALR W YL + PPL Sbjct: 409 NKTSNFSEKLCEKTRPGSFSTIWIITGLGVVFFSVMVLYALRSVWKYLCHVCF-PPL 464
>JHD1_CRYNE (Q55NZ6) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 879 Score = 30.8 bits (68), Expect = 2.9 Identities = 7/16 (43%), Positives = 11/16 (68%) Frame = -2 Query: 482 WIGCDVCERWYHGKCV 435 W+ C+ C+ WYH C+ Sbjct: 54 WVACNKCDEWYHSACL 69
>JHD1_KLULA (Q6CIC9) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 478 Score = 30.8 bits (68), Expect = 2.9 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -2 Query: 491 EEFWIGCDVCERWYHGKCVKI 429 + W+GC+ C+ W H CV I Sbjct: 21 QPIWVGCEFCDGWCHLTCVPI 41
>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger Length = 802 Score = 30.4 bits (67), Expect = 3.7 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSS 375 C CGG + + CD C YH C+ K + + CPSC + Sbjct: 347 CRVCGGKHEPN-MQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 394
>PHF10_MOUSE (Q9D8M7) PHD finger protein 10| Length = 410 Score = 30.4 bits (67), Expect = 3.7 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCV 435 C CG + EE CDVC+R YH CV Sbjct: 348 CIICGQPHHEEEMMF-CDVCDRGYHTFCV 375
>JHD1_ASPFU (Q4WHB7) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1418 Score = 30.0 bits (66), Expect = 4.9 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = -2 Query: 482 WIGCDVCERWYHGKCVKI-TPAKAESIKQYKCPSC 381 WI CD C++W+H C + ++ ++ C C Sbjct: 354 WISCDGCKQWFHIVCAGFKNDREIRTVDKFICRRC 388
>PHF20_HUMAN (Q9BVI0) PHD finger protein 20 (Hepatocellular carcinoma-associated| antigen 58) (Glioma-expressed antigen 2) (Transcription factor TZP) (Novel zinc finger protein) Length = 1012 Score = 30.0 bits (66), Expect = 4.9 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = -2 Query: 503 IYSAEEFWIGCDVCERWYHGKCVKITPAKA-ESIKQYKCPSCSSKRP 366 + +F I C+ C+ W HG C+ + E Y C +RP Sbjct: 659 VQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRP 705
>PHF20_MOUSE (Q8BLG0) PHD finger protein 20 (Hepatocellular carcinoma-associated| antigen 58 homolog) Length = 1010 Score = 30.0 bits (66), Expect = 4.9 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Frame = -2 Query: 503 IYSAEEFWIGCDVCERWYHGKCVKITPAKA-ESIKQYKCPSCSSKRP 366 + +F I C+ C+ W HG C+ + E Y C +RP Sbjct: 662 VQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRP 708
>YKA5_YEAST (P36106) Hypothetical 67.9 kDa protein RPL14A-AUR1 intergenic| region Length = 594 Score = 29.6 bits (65), Expect = 6.4 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%) Frame = -2 Query: 524 LCGTCGGIYSAEEFWIG----CDVCERWYHGKCV 435 LCG Y A E+ G CD C+ W H KC+ Sbjct: 76 LCGANNENYDAAEYSHGDMVQCDGCDTWQHIKCM 109
>SET3_SCHPO (Q10362) SET domain-containing protein 3| Length = 859 Score = 29.6 bits (65), Expect = 6.4 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = -2 Query: 485 FWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSK 372 F I C+ CE W H CV I ++Y C C + Sbjct: 16 FTIQCESCEVWQHAVCVNIDANNVP--EKYFCEQCQPR 51
>PYGO1_MOUSE (Q9D0P5) Pygopus homolog 1| Length = 417 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 7/70 (10%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDV-CERWYHGKCVKITPA-----KAESIKQYKCPSCSSKRPRQ 360 CG C + ++ I C+ C++W+H C +T AE+ + C +C + + Q Sbjct: 341 CGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQ 400 Query: 359 *QRP-HGWGP 333 R +GP Sbjct: 401 LMRTREAFGP 410
>PHF10_HUMAN (Q8WUB8) PHD finger protein 10 (XAP135)| Length = 410 Score = 29.3 bits (64), Expect = 8.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCV 435 C CG + EE CD+C+R YH CV Sbjct: 348 CIICGQPHHEEEMMF-CDMCDRGYHTFCV 375
>YA27_SCHPO (Q09698) Hypothetical protein C2F7.07c in chromosome I| Length = 607 Score = 29.3 bits (64), Expect = 8.3 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = -2 Query: 524 LCGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAES-IKQYKCPSCS 378 LC C + + CD C ++H C+ A S ++++KCP+ S Sbjct: 408 LCFRCHKSALVSQSILACDYCNSYWHPDCLNPPLATLPSNLRKWKCPNHS 457
>PYGO1_HUMAN (Q9Y3Y4) Pygopus homolog 1| Length = 419 Score = 29.3 bits (64), Expect = 8.3 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDV-CERWYHGKCVKITPA-----KAESIKQYKCPSCSSKRPRQ 360 CG C + ++ I C+ C++W+H C +T AE+ + C +C + + Q Sbjct: 343 CGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQ 402 Query: 359 *QR 351 R Sbjct: 403 LMR 405
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 29.3 bits (64), Expect = 8.3 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = -2 Query: 521 CGTCGGIYSAEEFWIGCDVCERWYHGKCVKITPAKAESIKQYKCPSC 381 C CGG ++ + CD C+ +H C+ + S ++ CP C Sbjct: 318 CHLCGGRQDPDK-QLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,486,623 Number of Sequences: 219361 Number of extensions: 1415223 Number of successful extensions: 4220 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 4039 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4213 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
