ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NRAM_IAGGD (Q9Q0U7) Neuraminidase (EC 3.2.1.18) 28 5.4

>NRAM_IAGGD (Q9Q0U7) Neuraminidase (EC 3.2.1.18)|
          Length = 469

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 38  SQQVYSGHQNAIEPCIRNVATFEN**W 118
           S  + +G+Q+  EPC +++ T+EN  W
Sbjct: 35  SHSIQTGNQHQAEPCNQSIITYENNTW 61


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,307,950
Number of Sequences: 219361
Number of extensions: 188370
Number of successful extensions: 444
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 80,573,946
effective HSP length: 19
effective length of database: 76,406,087
effective search space used: 1833746088
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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