>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  182 bits (92), Expect = 7e-43
 Identities = 137/152 (90%)
 Strand = Plus / Minus

                                                                           
Query: 227     tggaacacgtggtcctgccccggcgtgtccaccagctcggcctccccgcgccacccgctc 286
               ||||||| |||||| | ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 5825265 tggaacaagtggtcttcccccggcgtgtccaccagctcggcctccccgtgccaccggctc 5825206

                                                                           
Query: 287     gcgagcagcgccgcatggtacgcccgccccttcaccgccaggaagtcgtcgcccgccacg 346
               || |  |||||||| |||||||||| ||| ||| |||||||||||||||| || ||||||
Sbjct: 5825205 gccacgagcgccgcgtggtacgccctccctttccccgccaggaagtcgtccccggccacg 5825146

                                               
Query: 347     gccaccatcgccctcctgcacggcagcgccgc 378
               ||||||||| ||||||||||||||||||||||
Sbjct: 5825145 gccaccatcaccctcctgcacggcagcgccgc 5825114



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 447     cgcacatgaaccgccactcg 466
               ||||||||||||||||||||
Sbjct: 5825045 cgcacatgaaccgccactcg 5825026

>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score =  182 bits (92), Expect = 7e-43
 Identities = 137/152 (90%)
 Strand = Plus / Minus

                                                                          
Query: 227    tggaacacgtggtcctgccccggcgtgtccaccagctcggcctccccgcgccacccgctc 286
              ||||||| |||||| | ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 140794 tggaacaagtggtcttcccccggcgtgtccaccagctcggcctccccgtgccaccggctc 140735

                                                                          
Query: 287    gcgagcagcgccgcatggtacgcccgccccttcaccgccaggaagtcgtcgcccgccacg 346
              || |  |||||||| |||||||||| ||| ||| |||||||||||||||| || ||||||
Sbjct: 140734 gccacgagcgccgcgtggtacgccctccctttccccgccaggaagtcgtccccggccacg 140675

                                              
Query: 347    gccaccatcgccctcctgcacggcagcgccgc 378
              ||||||||| ||||||||||||||||||||||
Sbjct: 140674 gccaccatcaccctcctgcacggcagcgccgc 140643



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    cgcacatgaaccgccactcg 466
              ||||||||||||||||||||
Sbjct: 140574 cgcacatgaaccgccactcg 140555

>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score =  182 bits (92), Expect = 7e-43
 Identities = 137/152 (90%)
 Strand = Plus / Minus

                                                                         
Query: 227   tggaacacgtggtcctgccccggcgtgtccaccagctcggcctccccgcgccacccgctc 286
             ||||||| |||||| | ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 26040 tggaacaagtggtcttcccccggcgtgtccaccagctcggcctccccgtgccaccggctc 25981

                                                                         
Query: 287   gcgagcagcgccgcatggtacgcccgccccttcaccgccaggaagtcgtcgcccgccacg 346
             || |  |||||||| |||||||||| ||| ||| |||||||||||||||| || ||||||
Sbjct: 25980 gccacgagcgccgcgtggtacgccctccctttccccgccaggaagtcgtccccggccacg 25921

                                             
Query: 347   gccaccatcgccctcctgcacggcagcgccgc 378
             ||||||||| ||||||||||||||||||||||
Sbjct: 25920 gccaccatcaccctcctgcacggcagcgccgc 25889



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   cgcacatgaaccgccactcg 466
             ||||||||||||||||||||
Sbjct: 25820 cgcacatgaaccgccactcg 25801

>dbj|AK108107.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-B08, full
           insert sequence
          Length = 1131

 Score =  182 bits (92), Expect = 7e-43
 Identities = 137/152 (90%)
 Strand = Plus / Minus

                                                                       
Query: 227 tggaacacgtggtcctgccccggcgtgtccaccagctcggcctccccgcgccacccgctc 286
           ||||||| |||||| | ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 952 tggaacaagtggtcttcccccggcgtgtccaccagctcggcctccccgtgccaccggctc 893

                                                                       
Query: 287 gcgagcagcgccgcatggtacgcccgccccttcaccgccaggaagtcgtcgcccgccacg 346
           || |  |||||||| |||||||||| ||| ||| |||||||||||||||| || ||||||
Sbjct: 892 gccacgagcgccgcgtggtacgccctccctttccccgccaggaagtcgtccccggccacg 833

                                           
Query: 347 gccaccatcgccctcctgcacggcagcgccgc 378
           ||||||||| ||||||||||||||||||||||
Sbjct: 832 gccaccatcaccctcctgcacggcagcgccgc 801



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 447 cgcacatgaaccgccactcg 466
           ||||||||||||||||||||
Sbjct: 732 cgcacatgaaccgccactcg 713

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 273     cgcgccacccgctcgcgagcagcgccgc 300
               ||||||| ||||||||||||||||||||
Sbjct: 1207548 cgcgccagccgctcgcgagcagcgccgc 1207575



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 333     cgtcgcccgccacggccacc 352
               ||||||||||||||||||||
Sbjct: 2595340 cgtcgcccgccacggccacc 2595359

>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 376    cgcgagccgcggcgccgcctcggggc 401
              |||| |||||||||||||||||||||
Sbjct: 120105 cgcgcgccgcggcgccgcctcggggc 120130



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 376  cgcgagccgcggcgccgcctcggggc 401
            |||| |||||||||||||||||||||
Sbjct: 3425 cgcgcgccgcggcgccgcctcggggc 3400

>ref|XM_483141.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 376 cgcgagccgcggcgccgcctc 396
           |||||||||||||||||||||
Sbjct: 256 cgcgagccgcggcgccgcctc 236

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 376      cgcgagccgcggcgccgcctc 396
                |||||||||||||||||||||
Sbjct: 24457454 cgcgagccgcggcgccgcctc 24457434

>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1142B04
          Length = 161964

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 376   cgcgagccgcggcgccgcctc 396
             |||||||||||||||||||||
Sbjct: 73170 cgcgagccgcggcgccgcctc 73150

>dbj|AK100472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093I21, full
           insert sequence
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 376 cgcgagccgcggcgccgcctc 396
           |||||||||||||||||||||
Sbjct: 256 cgcgagccgcggcgccgcctc 236

>gb|U04297.1|OSU04297 Oryza sativa Nipponbare bZIP DNA-binding factor (osZIP-2b) mRNA,
           complete cds
          Length = 1080

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 264 cggcctccccgcgccacccgc 284
           |||||||||||||||||||||
Sbjct: 313 cggcctccccgcgccacccgc 333

>ref|XM_479408.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1350

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 304 gtacgcccgccccttcaccgccag 327
           |||||| |||||||||||||||||
Sbjct: 276 gtacgcgcgccccttcaccgccag 253

>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07,
              complete sequence
          Length = 151399

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    ccgccacggccaccatcgcc 358
              ||||||||||||||||||||
Sbjct: 106288 ccgccacggccaccatcgcc 106269

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ccgcgagccgcggcgccgcc 394
              ||||||||||||||||||||
Sbjct: 690760 ccgcgagccgcggcgccgcc 690779

>gb|AY577942.1| Petromyzon marinus clone PAC4 variable lymphocyte receptor (VLR) gene,
             partial sequence
          Length = 58162

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cgaccacaattccacttcaa 137
             ||||||||||||||||||||
Sbjct: 19231 cgaccacaattccacttcaa 19250

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 367     cggcagcgccgcgagccgcggcgc 390
               |||||||| |||||||||||||||
Sbjct: 2376339 cggcagcggcgcgagccgcggcgc 2376316

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 367     cggcagcgccgcgagccgcggcgc 390
               |||||||| |||||||||||||||
Sbjct: 2008226 cggcagcggcgcgagccgcggcgc 2008249

>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    gagccgcggcgccgcctcgg 398
              ||||||||||||||||||||
Sbjct: 143033 gagccgcggcgccgcctcgg 143052

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 417     tcgggtcgcccacctcggcg 436
               ||||||||||||||||||||
Sbjct: 2066287 tcgggtcgcccacctcggcg 2066268

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 381     gccgcggcgccgcctcgggg 400
               ||||||||||||||||||||
Sbjct: 2233417 gccgcggcgccgcctcgggg 2233436

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 304      gtacgcccgccccttcaccgccag 327
                |||||| |||||||||||||||||
Sbjct: 27693045 gtacgcgcgccccttcaccgccag 27693022

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 339     ccgccacggccaccatcgcc 358
               ||||||||||||||||||||
Sbjct: 2013411 ccgccacggccaccatcgcc 2013392

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 281     ccgctcgcgagcagcgccgc 300
               ||||||||||||||||||||
Sbjct: 4986985 ccgctcgcgagcagcgccgc 4986966

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 367     cggcagcgccgcgagccgcggcgccgcc 394
               |||||||||||||| ||||| |||||||
Sbjct: 3323690 cggcagcgccgcgaaccgcgccgccgcc 3323663



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 266     gcctccccgcgccacccgctcgcg 289
               |||||||||||||||| |||||||
Sbjct: 1331074 gcctccccgcgccaccggctcgcg 1331051

>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0047B07
          Length = 157797

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    gtacgcccgccccttcaccgccag 327
              |||||| |||||||||||||||||
Sbjct: 150038 gtacgcgcgccccttcaccgccag 150015

>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1477_F01
          Length = 158792

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   gtacgcccgccccttcaccgccag 327
             |||||| |||||||||||||||||
Sbjct: 72147 gtacgcgcgccccttcaccgccag 72124

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 367     cggcagcgccgcgagccgcg 386
               ||||||||||||||||||||
Sbjct: 2979843 cggcagcgccgcgagccgcg 2979824

>dbj|AK063587.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A08, full
           insert sequence
          Length = 826

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 ccgccacggccaccatcgcc 358
           ||||||||||||||||||||
Sbjct: 198 ccgccacggccaccatcgcc 179

>tpe|BN000599.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx70 gene for
           class III peroxidase 70 precursor, exons 1-2
          Length = 1356

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 ccgccacggccaccatcgcc 358
           ||||||||||||||||||||
Sbjct: 55  ccgccacggccaccatcgcc 36


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,031,478
Number of Sequences: 3902068
Number of extensions: 3031478
Number of successful extensions: 57138
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54998
Number of HSP's gapped (non-prelim): 2140
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)