ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart40a06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190973.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 242 bits (122), Expect = 7e-61 Identities = 140/146 (95%) Strand = Plus / Minus Query: 263 cgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgta 322 ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 1450 cgccggcgtaccggaggctgaactgctcgagcacgcacgccacgatggacttcatctgta 1391 Query: 323 tgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttga 382 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1390 tgtaggccatctccttgcctaggcacatcctcggccccgcgtggaacaccgggtacttga 1331 Query: 383 acgggctctccggccggaacgcgccc 408 ||| |||||||||||||||||||||| Sbjct: 1330 acgtgctctccggccggaacgcgccc 1305
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 242 bits (122), Expect = 7e-61 Identities = 140/146 (95%) Strand = Plus / Minus Query: 263 cgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgta 322 ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 34109809 cgccggcgtaccggaggctgaactgctcgagcacgcacgccacgatggacttcatctgta 34109750 Query: 323 tgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttga 382 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 34109749 tgtaggccatctccttgcctaggcacatcctcggccccgcgtggaacaccgggtacttga 34109690 Query: 383 acgggctctccggccggaacgcgccc 408 ||| |||||||||||||||||||||| Sbjct: 34109689 acgtgctctccggccggaacgcgccc 34109664 Score = 206 bits (104), Expect = 4e-50 Identities = 140/152 (92%) Strand = Plus / Minus Query: 256 ccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttc 315 ||||| || ||||| |||||||| ||||||||||| ||||| | || || ||||||||| Sbjct: 34079465 ccctcgccaccggcataccggagactgaacctctcaagcacagatgctacaatggacttc 34079406 Query: 316 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcg 375 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 34079405 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaaaccggg 34079346 Query: 376 tacttgaacgggctctccggccggaacgcgcc 407 |||||||||||||||||||||||||||||||| Sbjct: 34079345 tacttgaacgggctctccggccggaacgcgcc 34079314 Score = 206 bits (104), Expect = 4e-50 Identities = 140/152 (92%) Strand = Plus / Minus Query: 256 ccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttc 315 ||||| |||||||| ||| |||| ||||||||||| ||||| | || || ||||||||| Sbjct: 34069539 ccctcgccgccggcatactggagactgaacctctcgagcacagatgctacaatggacttc 34069480 Query: 316 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcg 375 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 34069479 atctgtatgtcggccatctccttgccgaggcacatcctcggccccgcgtggaacaccggg 34069420 Query: 376 tacttgaacgggctctccggccggaacgcgcc 407 |||||||||||||||||||||||||||||||| Sbjct: 34069419 tacttgaacgggctctccggccggaacgcgcc 34069388 Score = 204 bits (103), Expect = 2e-49 Identities = 145/159 (91%) Strand = Plus / Minus Query: 250 ggatgcccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatg 309 ||||||||||| ||||||| ||||||||| ||||||| || | |||||||| ||||||| Sbjct: 34094158 ggatgcccctcgccgccggtgtaccggagtgtgaacctgtcgaacacgcacgacacgatg 34094099 Query: 310 gacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaac 369 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 34094098 gacttcatctgtatgtaggctatctccttgccgaggcacatcctcggcccgccgtggaac 34094039 Query: 370 accgcgtacttgaacgggctctccggccggaacgcgccc 408 |||| ||||||||||| |||||||||||||||| ||||| Sbjct: 34094038 accgggtacttgaacgagctctccggccggaacacgccc 34094000 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 256 ccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttc 315 ||||| |||||| || ||| || |||||||||||| | |||||||||| ||||||||||| Sbjct: 34126551 ccctcgccgccgacgaacctgaagctgaacctctcgaacacgcacgccgcgatggacttc 34126492 Query: 316 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcg 375 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 34126491 atctgtatgtatgccatctccttgccgaggcacatcctcggcccgccgtggaacaccggg 34126432 Query: 376 tacttgaacgggctctccggccggaacgcgcc 407 ||||||||||||||||||||||||||| |||| Sbjct: 34126431 tacttgaacgggctctccggccggaacacgcc 34126400 Score = 182 bits (92), Expect = 6e-43 Identities = 131/144 (90%) Strand = Plus / Minus Query: 265 ccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgtatg 324 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 34084254 ccggcgtaccggaggctgaactgctcgagcacgcacgccacgatggacttcatctgtatg 34084195 Query: 325 taggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaac 384 || ||||||||||||||||| |||||||| || || |||||||| | | |||||||||| Sbjct: 34084194 tatgccatctccttgccgagacacatccttggtccggcgtggaagatggggtacttgaac 34084135 Query: 385 gggctctccggccggaacgcgccc 408 ||||| |||||||||||||||||| Sbjct: 34084134 gggctgtccggccggaacgcgccc 34084111 Score = 155 bits (78), Expect = 1e-34 Identities = 126/142 (88%) Strand = Plus / Minus Query: 267 ggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgtatgta 326 |||||||||||| |||||| |||| ||||| || || ||||| |||||||| |||||||| Sbjct: 34089312 ggcgtaccggagactgaacttctcgagcacacaagcgacgattgacttcatttgtatgta 34089253 Query: 327 ggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgg 386 ||||||||||||||||| ||| |||| ||||| |||| |||||||| ||||||||||| Sbjct: 34089252 ggccatctccttgccgatgcagatccgaggcccggcgttgaacaccgggtacttgaacgt 34089193 Query: 387 gctctccggccggaacgcgccc 408 |||||||||||||||||||||| Sbjct: 34089192 gctctccggccggaacgcgccc 34089171 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||||| ||||||||| | |||||| ||||||||||| Sbjct: 41892529 cttcatctgcacgtacgccatctccttcccgaggcacgagcgcggcccggcgtggaacac 41892588 Query: 372 cgcgtac 378 || |||| Sbjct: 41892589 cgggtac 41892595 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||| | ||||||||| || ||||||||||||||||| Sbjct: 41889169 cttcatctgcacgtacgccatctccctcccgaggcacgcccgtggccccgcgtggaacac 41889228 Query: 372 cgcgtac 378 || |||| Sbjct: 41889229 cgggtac 41889235 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 305 cgatggacttcatctgtatgtaggccatctccttgccgaggcac 348 ||||||| |||||||| | |||||||| ||||||||||||||| Sbjct: 36834890 cgatggatttcatctgcaggtaggccaggtccttgccgaggcac 36834847 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 330 catctccttgccgaggcacatcct 353 |||||||||||||||||||||||| Sbjct: 34101969 catctccttgccgaggcacatcct 34101946
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 242 bits (122), Expect = 7e-61 Identities = 140/146 (95%) Strand = Plus / Minus Query: 263 cgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgta 322 ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 106287 cgccggcgtaccggaggctgaactgctcgagcacgcacgccacgatggacttcatctgta 106228 Query: 323 tgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttga 382 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 106227 tgtaggccatctccttgcctaggcacatcctcggccccgcgtggaacaccgggtacttga 106168 Query: 383 acgggctctccggccggaacgcgccc 408 ||| |||||||||||||||||||||| Sbjct: 106167 acgtgctctccggccggaacgcgccc 106142 Score = 206 bits (104), Expect = 4e-50 Identities = 140/152 (92%) Strand = Plus / Minus Query: 256 ccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttc 315 ||||| || ||||| |||||||| ||||||||||| ||||| | || || ||||||||| Sbjct: 75943 ccctcgccaccggcataccggagactgaacctctcaagcacagatgctacaatggacttc 75884 Query: 316 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcg 375 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 75883 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaaaccggg 75824 Query: 376 tacttgaacgggctctccggccggaacgcgcc 407 |||||||||||||||||||||||||||||||| Sbjct: 75823 tacttgaacgggctctccggccggaacgcgcc 75792 Score = 206 bits (104), Expect = 4e-50 Identities = 140/152 (92%) Strand = Plus / Minus Query: 256 ccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttc 315 ||||| |||||||| ||| |||| ||||||||||| ||||| | || || ||||||||| Sbjct: 66017 ccctcgccgccggcatactggagactgaacctctcgagcacagatgctacaatggacttc 65958 Query: 316 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcg 375 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 65957 atctgtatgtcggccatctccttgccgaggcacatcctcggccccgcgtggaacaccggg 65898 Query: 376 tacttgaacgggctctccggccggaacgcgcc 407 |||||||||||||||||||||||||||||||| Sbjct: 65897 tacttgaacgggctctccggccggaacgcgcc 65866 Score = 204 bits (103), Expect = 2e-49 Identities = 145/159 (91%) Strand = Plus / Minus Query: 250 ggatgcccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatg 309 ||||||||||| ||||||| ||||||||| ||||||| || | |||||||| ||||||| Sbjct: 90636 ggatgcccctcgccgccggtgtaccggagtgtgaacctgtcgaacacgcacgacacgatg 90577 Query: 310 gacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaac 369 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 90576 gacttcatctgtatgtaggctatctccttgccgaggcacatcctcggcccgccgtggaac 90517 Query: 370 accgcgtacttgaacgggctctccggccggaacgcgccc 408 |||| ||||||||||| |||||||||||||||| ||||| Sbjct: 90516 accgggtacttgaacgagctctccggccggaacacgccc 90478 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 256 ccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttc 315 ||||| |||||| || ||| || |||||||||||| | |||||||||| ||||||||||| Sbjct: 123029 ccctcgccgccgacgaacctgaagctgaacctctcgaacacgcacgccgcgatggacttc 122970 Query: 316 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcg 375 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 122969 atctgtatgtatgccatctccttgccgaggcacatcctcggcccgccgtggaacaccggg 122910 Query: 376 tacttgaacgggctctccggccggaacgcgcc 407 ||||||||||||||||||||||||||| |||| Sbjct: 122909 tacttgaacgggctctccggccggaacacgcc 122878 Score = 182 bits (92), Expect = 6e-43 Identities = 131/144 (90%) Strand = Plus / Minus Query: 265 ccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgtatg 324 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 80732 ccggcgtaccggaggctgaactgctcgagcacgcacgccacgatggacttcatctgtatg 80673 Query: 325 taggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaac 384 || ||||||||||||||||| |||||||| || || |||||||| | | |||||||||| Sbjct: 80672 tatgccatctccttgccgagacacatccttggtccggcgtggaagatggggtacttgaac 80613 Query: 385 gggctctccggccggaacgcgccc 408 ||||| |||||||||||||||||| Sbjct: 80612 gggctgtccggccggaacgcgccc 80589 Score = 155 bits (78), Expect = 1e-34 Identities = 126/142 (88%) Strand = Plus / Minus Query: 267 ggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgtatgta 326 |||||||||||| |||||| |||| ||||| || || ||||| |||||||| |||||||| Sbjct: 85790 ggcgtaccggagactgaacttctcgagcacacaagcgacgattgacttcatttgtatgta 85731 Query: 327 ggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgg 386 ||||||||||||||||| ||| |||| ||||| |||| |||||||| ||||||||||| Sbjct: 85730 ggccatctccttgccgatgcagatccgaggcccggcgttgaacaccgggtacttgaacgt 85671 Query: 387 gctctccggccggaacgcgccc 408 |||||||||||||||||||||| Sbjct: 85670 gctctccggccggaacgcgccc 85649 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 330 catctccttgccgaggcacatcct 353 |||||||||||||||||||||||| Sbjct: 98447 catctccttgccgaggcacatcct 98424
>dbj|AK070931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B22, full insert sequence Length = 1757 Score = 242 bits (122), Expect = 7e-61 Identities = 140/146 (95%) Strand = Plus / Minus Query: 263 cgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgta 322 ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 1551 cgccggcgtaccggaggctgaactgctcgagcacgcacgccacgatggacttcatctgta 1492 Query: 323 tgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttga 382 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct: 1491 tgtaggccatctccttgcctaggcacatcctcggccccgcgtggaacaccgggtacttga 1432 Query: 383 acgggctctccggccggaacgcgccc 408 ||| |||||||||||||||||||||| Sbjct: 1431 acgtgctctccggccggaacgcgccc 1406
>ref|NM_190966.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 206 bits (104), Expect = 4e-50 Identities = 140/152 (92%) Strand = Plus / Minus Query: 256 ccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttc 315 ||||| || ||||| |||||||| ||||||||||| ||||| | || || ||||||||| Sbjct: 1451 ccctcgccaccggcataccggagactgaacctctcaagcacagatgctacaatggacttc 1392 Query: 316 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcg 375 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 1391 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaaaccggg 1332 Query: 376 tacttgaacgggctctccggccggaacgcgcc 407 |||||||||||||||||||||||||||||||| Sbjct: 1331 tacttgaacgggctctccggccggaacgcgcc 1300
>dbj|AK064306.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B08, full insert sequence Length = 1532 Score = 206 bits (104), Expect = 4e-50 Identities = 140/152 (92%) Strand = Plus / Minus Query: 256 ccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttc 315 ||||| || ||||| |||||||| ||||||||||| ||||| | || || ||||||||| Sbjct: 1360 ccctcgccaccggcataccggagactgaacctctcaagcacagatgctacaatggacttc 1301 Query: 316 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcg 375 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 1300 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaaaccggg 1241 Query: 376 tacttgaacgggctctccggccggaacgcgcc 407 |||||||||||||||||||||||||||||||| Sbjct: 1240 tacttgaacgggctctccggccggaacgcgcc 1209
>ref|NM_190970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1548 Score = 204 bits (103), Expect = 2e-49 Identities = 145/159 (91%) Strand = Plus / Minus Query: 250 ggatgcccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatg 309 ||||||||||| ||||||| ||||||||| ||||||| || | |||||||| ||||||| Sbjct: 1457 ggatgcccctcgccgccggtgtaccggagtgtgaacctgtcgaacacgcacgacacgatg 1398 Query: 310 gacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaac 369 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 1397 gacttcatctgtatgtaggctatctccttgccgaggcacatcctcggcccgccgtggaac 1338 Query: 370 accgcgtacttgaacgggctctccggccggaacgcgccc 408 |||| ||||||||||| |||||||||||||||| ||||| Sbjct: 1337 accgggtacttgaacgagctctccggccggaacacgccc 1299
>dbj|AK102714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105A13, full insert sequence Length = 1564 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 256 ccctccccgccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttc 315 ||||| |||||| || ||| || |||||||||||| | |||||||||| ||||||||||| Sbjct: 1409 ccctcgccgccgacgaacctgaagctgaacctctcgaacacgcacgccgcgatggacttc 1350 Query: 316 atctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcg 375 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 1349 atctgtatgtatgccatctccttgccgaggcacatcctcggcccgccgtggaacaccggg 1290 Query: 376 tacttgaacgggctctccggccggaacgcgcc 407 ||||||||||||||||||||||||||| |||| Sbjct: 1289 tacttgaacgggctctccggccggaacacgcc 1258
>ref|NM_190967.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1539 Score = 182 bits (92), Expect = 6e-43 Identities = 131/144 (90%) Strand = Plus / Minus Query: 265 ccggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgtatg 324 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 1454 ccggcgtaccggaggctgaactgctcgagcacgcacgccacgatggacttcatctgtatg 1395 Query: 325 taggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaac 384 || ||||||||||||||||| |||||||| || || |||||||| | | |||||||||| Sbjct: 1394 tatgccatctccttgccgagacacatccttggtccggcgtggaagatggggtacttgaac 1335 Query: 385 gggctctccggccggaacgcgccc 408 ||||| |||||||||||||||||| Sbjct: 1334 gggctgtccggccggaacgcgccc 1311
>ref|NM_190969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 155 bits (78), Expect = 1e-34 Identities = 126/142 (88%) Strand = Plus / Minus Query: 267 ggcgtaccggaggctgaacctctccagcacgcacgccacgatggacttcatctgtatgta 326 |||||||||||| |||||| |||| ||||| || || ||||| |||||||| |||||||| Sbjct: 1446 ggcgtaccggagactgaacttctcgagcacacaagcgacgattgacttcatttgtatgta 1387 Query: 327 ggccatctccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgg 386 ||||||||||||||||| ||| |||| ||||| |||| |||||||| ||||||||||| Sbjct: 1386 ggccatctccttgccgatgcagatccgaggcccggcgttgaacaccgggtacttgaacgt 1327 Query: 387 gctctccggccggaacgcgccc 408 |||||||||||||||||||||| Sbjct: 1326 gctctccggccggaacgcgccc 1305
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 133897 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 133838 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 133837 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 133797
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 6174 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 6233 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 6234 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 6274
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1723876 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 1723935 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 1723936 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 1723976 Score = 113 bits (57), Expect = 5e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1716616 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcatgg 1716557 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 1716556 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 1716516 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 311 acttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaca 370 |||||||||| | | | ||||| ||||||||||||||| ||| |||||| | ||||||| Sbjct: 14910647 acttcatctgcacgaacgccatgtccttgccgaggcacgtccgcggcccgccctggaaca 14910706 Query: 371 ccgcgtacttgaacgg 386 ||| |||||||||||| Sbjct: 14910707 ccgggtacttgaacgg 14910722 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 364 tggaacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 |||||||||| ||||||||| ||||||||||| ||||||||| Sbjct: 2467309 tggaacaccgggtacttgaagaggctctccggcacgaacgcgcc 2467352
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1788344 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 1788403 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 1788404 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 1788444 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1769726 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 1769667 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 1769666 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 1769626 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 311 acttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaca 370 |||||||||| | | | ||||||||||||||||||||| |||||||||| | ||||||| Sbjct: 16396606 acttcatctggacgaacgccatctccttgccgaggcacgtcctcggcccgccctggaaca 16396547 Query: 371 ccgcgtacttgaacgg 386 ||| |||||||||||| Sbjct: 16396546 ccgggtacttgaacgg 16396531
>dbj|AK103307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125E14, full insert sequence Length = 1928 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1497 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 1438 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 1437 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 1397
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1786065 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 1786124 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 1786125 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 1786165 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1767447 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 1767388 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 1767387 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 1767347 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 311 acttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaca 370 |||||||||| | | | ||||||||||||||||||||| |||||||||| | ||||||| Sbjct: 16487621 acttcatctggacgaacgccatctccttgccgaggcacgtcctcggcccgccctggaaca 16487562 Query: 371 ccgcgtacttgaacgg 386 ||| |||||||||||| Sbjct: 16487561 ccgggtacttgaacgg 16487546
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1723852 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 1723911 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 1723912 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 1723952 Score = 113 bits (57), Expect = 5e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1716592 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcatgg 1716533 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 1716532 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 1716492 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 311 acttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaca 370 |||||||||| | | | ||||| ||||||||||||||| ||| |||||| | ||||||| Sbjct: 14864930 acttcatctgcacgaacgccatgtccttgccgaggcacgtccgcggcccgccctggaaca 14864989 Query: 371 ccgcgtacttgaacgg 386 ||| |||||||||||| Sbjct: 14864990 ccgggtacttgaacgg 14865005 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 364 tggaacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 |||||||||| ||||||||| ||||||||||| ||||||||| Sbjct: 2467253 tggaacaccgggtacttgaagaggctctccggcacgaacgcgcc 2467296
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 116608 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 116549 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 116548 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 116508 Score = 113 bits (57), Expect = 5e-22 Identities = 90/101 (89%) Strand = Plus / Plus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 123868 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcatgg 123927 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 123928 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 123968
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 43045 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcgtgg 42986 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 42985 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 42945 Score = 113 bits (57), Expect = 5e-22 Identities = 90/101 (89%) Strand = Plus / Plus Query: 307 atggacttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtgg 366 |||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 50305 atggacttcatctgcacgtacgccatctccttcccgaggcacatcctcggccccgcatgg 50364 Query: 367 aacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 ||||||| | || |||||||||| ||||| |||||||||| Sbjct: 50365 aacaccgtgaaccggaacgggctcgccggctggaacgcgcc 50405
>ref|NM_187695.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 292 agcacgcacgccacgatggacttcatctgtatgtaggccatctccttgccgaggcacatc 351 |||||||| || | ||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 1460 agcacgcaggcgatgatggacttcatctgtatgtacgccatctccttcccgaggcacacc 1401 Query: 352 ctcggccccgcgtggaacaccgcgtacttgaacgggctctccggccggaacg 403 |||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 1400 ctcggcccgccgtggaacgacacgtaccggaacgggctctccggccggaacg 1349
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Plus Query: 292 agcacgcacgccacgatggacttcatctgtatgtaggccatctccttgccgaggcacatc 351 |||||||| || | ||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 6412223 agcacgcaggcgatgatggacttcatctgtatgtacgccatctccttcccgaggcacacc 6412282 Query: 352 ctcggccccgcgtggaacaccgcgtacttgaacgggctctccggccggaacg 403 |||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 6412283 ctcggcccgccgtggaacgacacgtaccggaacgggctctccggccggaacg 6412334 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 328 gccatctccttgccgaggcacatcctcggccc 359 |||||||||||||||||||| |||||||||| Sbjct: 2206609 gccatctccttgccgaggcatgtcctcggccc 2206578 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 334 tccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgg 386 |||||||||||||| |||| |||||| || |||||| | | | |||||||||| Sbjct: 3683952 tccttgccgaggcagatccgcggcccggcctggaacgcggtgaacttgaacgg 3684004 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 328 gccatctccttgccgaggcacatcctcgg 356 |||| |||||||||||||||| ||||||| Sbjct: 2195010 gccagctccttgccgaggcacgtcctcgg 2194982
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Plus Query: 292 agcacgcacgccacgatggacttcatctgtatgtaggccatctccttgccgaggcacatc 351 |||||||| || | ||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 92349 agcacgcaggcgatgatggacttcatctgtatgtacgccatctccttcccgaggcacacc 92408 Query: 352 ctcggccccgcgtggaacaccgcgtacttgaacgggctctccggccggaacg 403 |||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 92409 ctcggcccgccgtggaacgacacgtaccggaacgggctctccggccggaacg 92460
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Plus Query: 292 agcacgcacgccacgatggacttcatctgtatgtaggccatctccttgccgaggcacatc 351 |||||||| || | ||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 6411436 agcacgcaggcgatgatggacttcatctgtatgtacgccatctccttcccgaggcacacc 6411495 Query: 352 ctcggccccgcgtggaacaccgcgtacttgaacgggctctccggccggaacg 403 |||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 6411496 ctcggcccgccgtggaacgacacgtaccggaacgggctctccggccggaacg 6411547 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 328 gccatctccttgccgaggcacatcctcggccc 359 |||||||||||||||||||| |||||||||| Sbjct: 2206621 gccatctccttgccgaggcatgtcctcggccc 2206590 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 334 tccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgg 386 |||||||||||||| |||| |||||| || |||||| | | | |||||||||| Sbjct: 3684063 tccttgccgaggcagatccgcggcccggcctggaacgcggtgaacttgaacgg 3684115 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 328 gccatctccttgccgaggcacatcctcgg 356 |||| |||||||||||||||| ||||||| Sbjct: 2195022 gccagctccttgccgaggcacgtcctcgg 2194994
>dbj|AK109504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D01, full insert sequence Length = 2009 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 292 agcacgcacgccacgatggacttcatctgtatgtaggccatctccttgccgaggcacatc 351 |||||||| || | ||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 1520 agcacgcaggcgatgatggacttcatctgtatgtacgccatctccttcccgaggcacacc 1461 Query: 352 ctcggccccgcgtggaacaccgcgtacttgaacgggctctccggccggaacg 403 |||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 1460 ctcggcccgccgtggaacgacacgtaccggaacgggctctccggccggaacg 1409
>dbj|AK105985.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G07, full insert sequence Length = 1672 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 292 agcacgcacgccacgatggacttcatctgtatgtaggccatctccttgccgaggcacatc 351 |||||||| || | ||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 1502 agcacgcaggcgatgatggacttcatctgtatgtacgccatctccttcccgaggcacacc 1443 Query: 352 ctcggccccgcgtggaacaccgcgtacttgaacgggctctccggccggaacg 403 |||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 1442 ctcggcccgccgtggaacgacacgtaccggaacgggctctccggccggaacg 1391
>dbj|AK062585.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E07, full insert sequence Length = 1710 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 292 agcacgcacgccacgatggacttcatctgtatgtaggccatctccttgccgaggcacatc 351 |||||||| || | ||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct: 1520 agcacgcaggcgatgatggacttcatctgtatgtacgccatctccttcccgaggcacacc 1461 Query: 352 ctcggccccgcgtggaacaccgcgtacttgaacgggctctccggccggaacg 403 |||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 1460 ctcggcccgccgtggaacgacacgtaccggaacgggctctccggccggaacg 1409
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 311 acttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaca 370 |||||||||| | | | ||||||||||||||||||||| |||||||||| | ||||||| Sbjct: 37216 acttcatctggacgaacgccatctccttgccgaggcacgtcctcggcccgccctggaaca 37157 Query: 371 ccgcgtacttgaacgg 386 ||| |||||||||||| Sbjct: 37156 ccgggtacttgaacgg 37141
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 311 acttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaca 370 |||||||||| | | | ||||||||||||||||||||| |||||||||| | ||||||| Sbjct: 137041 acttcatctggacgaacgccatctccttgccgaggcacgtcctcggcccgccctggaaca 136982 Query: 371 ccgcgtacttgaacgg 386 ||| |||||||||||| Sbjct: 136981 ccgggtacttgaacgg 136966
>ref|XM_475175.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1581 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||||| ||||||||| ||||||||| ||||||||||| Sbjct: 1437 cttcatctgcacgtacgccatctccttcccgaggcacgccctcggcccggcgtggaacac 1378 Query: 372 cgcgtac 378 || |||| Sbjct: 1377 cgggtac 1371
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||||| ||||||||| ||||||||| ||||||||||| Sbjct: 137754 cttcatctgcacgtacgccatctccttcccgaggcacgccctcggcccggcgtggaacac 137695 Query: 372 cgcgtac 378 || |||| Sbjct: 137694 cgggtac 137688
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||||| ||||||||| ||||||||| ||||||||||| Sbjct: 18344542 cttcatctgcacgtacgccatctccttcccgaggcacgccctcggcccggcgtggaacac 18344483 Query: 372 cgcgtac 378 || |||| Sbjct: 18344482 cgggtac 18344476 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Minus Query: 334 tccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttg 381 |||||||||||||| |||||||||| |||| |||| ||||| ||||| Sbjct: 4829069 tccttgccgaggcagctcctcggcccggcgttgaacgccgcgaacttg 4829022
>dbj|AK107084.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G02, full insert sequence Length = 1893 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||||| ||||||||| ||||||||| ||||||||||| Sbjct: 1467 cttcatctgcacgtacgccatctccttcccgaggcacgccctcggcccggcgtggaacac 1408 Query: 372 cgcgtac 378 || |||| Sbjct: 1407 cgggtac 1401
>ref|XM_466535.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1746 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 340 ccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgggctctc 392 |||| ||||| |||||| || |||| ||||||||||||||||||||||||||| Sbjct: 1194 ccgatgcacagcctcgggccggcgttgaacaccgcgtacttgaacgggctctc 1142
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 340 ccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgggctctc 392 |||| ||||| |||||| || |||| ||||||||||||||||||||||||||| Sbjct: 23172829 ccgatgcacagcctcgggccggcgttgaacaccgcgtacttgaacgggctctc 23172881 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaac 369 ||||||||| | |||||| | |||||||||||||| ||||||||||| |||| |||| Sbjct: 27082184 cttcatctgcaggtaggcgaggtccttgccgaggcaaatcctcggcccggcgttgaac 27082241
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 340 ccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgggctctc 392 |||| ||||| |||||| || |||| ||||||||||||||||||||||||||| Sbjct: 30060 ccgatgcacagcctcgggccggcgttgaacaccgcgtacttgaacgggctctc 30112
>dbj|AK109775.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-B04, full insert sequence Length = 1746 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 340 ccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgggctctc 392 |||| ||||| |||||| || |||| ||||||||||||||||||||||||||| Sbjct: 1194 ccgatgcacagcctcgggccggcgttgaacaccgcgtacttgaacgggctctc 1142
>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146519 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 311 acttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaca 370 |||||||||| | | | ||||| ||||||||||||||| ||| |||||| | ||||||| Sbjct: 9239 acttcatctgcacgaacgccatgtccttgccgaggcacgtccgcggcccgccctggaaca 9180 Query: 371 ccgcgtacttgaacgg 386 ||| |||||||||||| Sbjct: 9179 ccgggtacttgaacgg 9164
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 311 acttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaaca 370 |||||||||| | | | ||||| ||||||||||||||| ||| |||||| | ||||||| Sbjct: 171200 acttcatctgcacgaacgccatgtccttgccgaggcacgtccgcggcccgccctggaaca 171141 Query: 371 ccgcgtacttgaacgg 386 ||| |||||||||||| Sbjct: 171140 ccgggtacttgaacgg 171125
>dbj|AK107158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E10, full insert sequence Length = 1711 Score = 61.9 bits (31), Expect = 1e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||||| ||||||||| |||||||| ||||||||||| Sbjct: 200 cttcatctgcacgtacgccatctccttcccgaggcacgccctcggcctggcgtggaacac 259 Query: 372 cgcgtac 378 || |||| Sbjct: 260 cgggtac 266
>gb|AF366297.1|AF366297 Zea mays cytochrome P450-like protein (ms*-sb200) mRNA, complete cds Length = 1891 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 334 tccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgg 386 |||||||| ||||| |||||||||||||| |||||| ||| | |||||||||| Sbjct: 1481 tccttgcccaggcagatcctcggccccgcctggaacgccgtgaacttgaacgg 1429
>gb|AY110120.1| Zea mays CL58113_1 mRNA sequence Length = 997 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 334 tccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgg 386 |||||||| ||||| |||||||||||||| |||||| ||| | |||||||||| Sbjct: 352 tccttgcccaggcagatcctcggccccgcctggaacgccgtgaacttgaacgg 404
>ref|XM_463749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1650 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||||| ||||||||| | |||||| ||||||||||| Sbjct: 1482 cttcatctgcacgtacgccatctccttcccgaggcacgagcgcggcccggcgtggaacac 1423 Query: 372 cgcgtac 378 || |||| Sbjct: 1422 cgggtac 1416
>ref|XM_463748.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1635 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||| | ||||||||| || ||||||||||||||||| Sbjct: 1464 cttcatctgcacgtacgccatctccctcccgaggcacgcccgtggccccgcgtggaacac 1405 Query: 372 cgcgtac 378 || |||| Sbjct: 1404 cgggtac 1398
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||||| ||||||||| | |||||| ||||||||||| Sbjct: 135905 cttcatctgcacgtacgccatctccttcccgaggcacgagcgcggcccggcgtggaacac 135964 Query: 372 cgcgtac 378 || |||| Sbjct: 135965 cgggtac 135971 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaacac 371 ||||||||| | ||| ||||||||| | ||||||||| || ||||||||||||||||| Sbjct: 132545 cttcatctgcacgtacgccatctccctcccgaggcacgcccgtggccccgcgtggaacac 132604 Query: 372 cgcgtac 378 || |||| Sbjct: 132605 cgggtac 132611
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaac 369 ||||||||| | |||||| | |||||||||||||| ||||||||||| |||| |||| Sbjct: 53833 cttcatctgcaggtaggcgaggtccttgccgaggcaaatcctcggcccggcgttgaac 53890
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaac 369 ||||||||| | |||||| | |||||||||||||| ||||||||||| |||| |||| Sbjct: 135386 cttcatctgcaggtaggcgaggtccttgccgaggcaaatcctcggcccggcgttgaac 135443
>dbj|AK069029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E06, full insert sequence Length = 2118 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 312 cttcatctgtatgtaggccatctccttgccgaggcacatcctcggccccgcgtggaac 369 ||||||||| | |||||| | |||||||||||||| ||||||||||| |||| |||| Sbjct: 1544 cttcatctgcaggtaggcgaggtccttgccgaggcaaatcctcggcccggcgttgaac 1487
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Minus Query: 328 gccatctccttgccgaggcacatcctcggccc 359 |||||||||||||||||||| |||||||||| Sbjct: 96903 gccatctccttgccgaggcatgtcctcggccc 96872 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 328 gccatctccttgccgaggcacatcctcgg 356 |||| |||||||||||||||| ||||||| Sbjct: 85304 gccagctccttgccgaggcacgtcctcgg 85276
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 328 gccatctccttgccgaggcacatcctcggccc 359 |||||||||||||||||||| |||||||||| Sbjct: 119447 gccatctccttgccgaggcatgtcctcggccc 119478 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 328 gccatctccttgccgaggcacatcctcgg 356 |||| |||||||||||||||| ||||||| Sbjct: 131046 gccagctccttgccgaggcacgtcctcgg 131074
>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1096A10 Length = 150976 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 305 cgatggacttcatctgtatgtaggccatctccttgccgaggcac 348 ||||||| |||||||| | |||||||| ||||||||||||||| Sbjct: 50468 cgatggatttcatctgcaggtaggccaggtccttgccgaggcac 50425
>dbj|AK109676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C01, full insert sequence Length = 2038 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 305 cgatggacttcatctgtatgtaggccatctccttgccgaggcac 348 ||||||| |||||||| | |||||||| ||||||||||||||| Sbjct: 1555 cgatggatttcatctgcaggtaggccaggtccttgccgaggcac 1512
>dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G12, full insert sequence Length = 1935 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 328 gccatctccttgccgaggcacatcctcggccc 359 |||||||||||||||||||| |||||||||| Sbjct: 206 gccatctccttgccgaggcatgtcctcggccc 237
>dbj|AK105519.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F08, full insert sequence Length = 1724 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Minus Query: 334 tccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttg 381 |||||||||||||| |||||||||| |||| |||| ||||| ||||| Sbjct: 1368 tccttgccgaggcagctcctcggcccggcgttgaacgccgcgaacttg 1321
>dbj|AK064287.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-H01, full insert sequence Length = 1772 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 364 tggaacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 |||||||||| ||||||||| ||||||||||| ||||||||| Sbjct: 1442 tggaacaccgggtacttgaagaggctctccggcacgaacgcgcc 1399
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 364 tggaacaccgcgtacttgaacgggctctccggccggaacgcgcc 407 |||||||||| ||||||||| ||||||||||| ||||||||| Sbjct: 76183 tggaacaccgggtacttgaagaggctctccggcacgaacgcgcc 76140
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Minus Query: 334 tccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttg 381 |||||||||||||| |||||||||| |||| |||| ||||| ||||| Sbjct: 101477 tccttgccgaggcagctcctcggcccggcgttgaacgccgcgaacttg 101430
>ref|XM_470289.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1827 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 334 tccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgg 386 |||||||||||||| |||| |||||| || |||||| | | | |||||||||| Sbjct: 1490 tccttgccgaggcagatccgcggcccggcctggaacgcggtgaacttgaacgg 1438
>gb|AE009004.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 30 of 256 of the complete sequence Length = 11521 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctgttcttcacctgcatgggcagg 210 |||||||||||||||| |||||||| Sbjct: 5839 cctgttcttcacctgcctgggcagg 5815
>gb|AC103600.8| Mus musculus chromosome 1, clone RP23-247F18, complete sequence Length = 199808 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 tgcaattctaaatgaaatcttttaa 52 ||||||| ||||||||||||||||| Sbjct: 177008 tgcaattataaatgaaatcttttaa 177032
>gb|AF512556.1| Homo sapiens integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) (ITGA2) gene, complete cds Length = 105904 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 cattgcaattctaaatgaaat 45 ||||||||||||||||||||| Sbjct: 83394 cattgcaattctaaatgaaat 83374
>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence Length = 139476 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 cattgcaattctaaatgaaat 45 ||||||||||||||||||||| Sbjct: 121471 cattgcaattctaaatgaaat 121491
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 334 tccttgccgaggcacatcctcggccccgcgtggaacaccgcgtacttgaacgg 386 |||||||||||||| |||| |||||| || |||||| | | | |||||||||| Sbjct: 97425 tccttgccgaggcagatccgcggcccggcctggaacgcggtgaacttgaacgg 97373
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctgttcttcacctgcatgggcagg 210 |||||||||||||||| |||||||| Sbjct: 322988 cctgttcttcacctgcctgggcagg 322964
>gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, complete sequence Length = 174831 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 cattgcaattctaaatgaaat 45 ||||||||||||||||||||| Sbjct: 72482 cattgcaattctaaatgaaat 72502
>gb|AC008973.6| Homo sapiens chromosome 5 clone CTD-2380L12, complete sequence Length = 117032 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 cattgcaattctaaatgaaat 45 ||||||||||||||||||||| Sbjct: 19592 cattgcaattctaaatgaaat 19612
>emb|BX004785.9| Zebrafish DNA sequence from clone CH211-12P12 in linkage group 18, complete sequence Length = 170077 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 aattctaaatgaaatctttta 51 ||||||||||||||||||||| Sbjct: 138185 aattctaaatgaaatctttta 138165
>gb|AF039940.1|AF039940 Agrobacterium tumefaciens groE operon repressor HrcA (hrcA) and GrpE (grpE) genes, complete cds Length = 4766 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 cctgttcttcacctgcatgggcagg 210 |||||||||||||||| |||||||| Sbjct: 2768 cctgttcttcacctgcctgggcagg 2744
>dbj|AK061292.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B03, full insert sequence Length = 1120 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 328 gccatctccttgccgaggcacatcctcgg 356 |||| |||||||||||||||| ||||||| Sbjct: 562 gccagctccttgccgaggcacgtcctcgg 534
>dbj|AP005227.3| Homo sapiens genomic DNA, chromosome 18 clone:CTD-2348G3, complete sequence Length = 127998 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 tagtttattaaacattgcaat 33 ||||||||||||||||||||| Sbjct: 43803 tagtttattaaacattgcaat 43783
>ref|XM_481110.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cttgccgaggcacatcctcggccc 359 ||||||| |||||||||||||||| Sbjct: 1369 cttgccggggcacatcctcggccc 1346
>ref|XM_481105.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1694 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cttgccgaggcacatcctcggccc 359 ||||||| |||||||||||||||| Sbjct: 1411 cttgccggggcacatcctcggccc 1388
>ref|XM_507182.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0005C03.18 mRNA Length = 1697 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cttgccgaggcacatcctcggccc 359 ||||||| |||||||||||||||| Sbjct: 1414 cttgccggggcacatcctcggccc 1391
>gb|AC138289.8| Mus musculus chromosome 1, clone RP24-329K3, complete sequence Length = 168668 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gtcagtgacattatgagctt 248 |||||||||||||||||||| Sbjct: 130206 gtcagtgacattatgagctt 130225
>gb|AC115920.11| Mus musculus chromosome 1, clone RP24-496H1, complete sequence Length = 161759 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 agtttattaaacattgcaat 33 |||||||||||||||||||| Sbjct: 148793 agtttattaaacattgcaat 148812
>gb|AC131088.4| Mus musculus chromosome 1, clone RP24-87K23, complete sequence Length = 189705 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 agtttattaaacattgcaat 33 |||||||||||||||||||| Sbjct: 187692 agtttattaaacattgcaat 187673
>emb|AL663087.14| Mouse DNA sequence from clone RP23-431M5 on chromosome 11 Contains the 5' end of the Grb10 gene for growth factor receptor bound protein 10, a nucleosome assembly protein 1-like 1 (Nap1l1) pseudogene and three CpG islands, complete sequence Length = 174389 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gatggacttcatctgtatgt 325 |||||||||||||||||||| Sbjct: 43806 gatggacttcatctgtatgt 43825
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 cggccccgcgtggaacaccgcgtacttg 381 ||||||||||| ||| |||||||||||| Sbjct: 112430 cggccccgcgttgaagaccgcgtacttg 112457
>emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete genome; segment 3/10 Length = 312050 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aagaacactgaacactacag 104 |||||||||||||||||||| Sbjct: 263089 aagaacactgaacactacag 263070
>gb|AF391290.1| Branchiostoma floridae cosmid MPMGc117C0475, partial sequence Length = 47933 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tggacttcatctgtatgtag 327 |||||||||||||||||||| Sbjct: 46771 tggacttcatctgtatgtag 46790
>gb|AC116333.2| Homo sapiens chromosome 5 clone CTD-2242E19, complete sequence Length = 112119 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tgcaattctaaatgaaatct 47 |||||||||||||||||||| Sbjct: 49751 tgcaattctaaatgaaatct 49770
>emb|BX248323.8| Zebrafish DNA sequence from clone CH211-199J6, complete sequence Length = 177714 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 attgcaattctaaatgaaat 45 |||||||||||||||||||| Sbjct: 66234 attgcaattctaaatgaaat 66215
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cttgccgaggcacatcctcggccc 359 ||||||| |||||||||||||||| Sbjct: 9952764 cttgccggggcacatcctcggccc 9952787 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cttgccgaggcacatcctcggccc 359 ||||||| |||||||||||||||| Sbjct: 9916592 cttgccggggcacatcctcggccc 9916569
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tctccagcacgcacgccacg 306 |||||||||||||||||||| Sbjct: 2516407 tctccagcacgcacgccacg 2516426
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cttgccgaggcacatcctcggccc 359 ||||||| |||||||||||||||| Sbjct: 100011 cttgccggggcacatcctcggccc 100034 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cttgccgaggcacatcctcggccc 359 ||||||| |||||||||||||||| Sbjct: 63839 cttgccggggcacatcctcggccc 63816
>dbj|AK104291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F05, full insert sequence Length = 1694 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cttgccgaggcacatcctcggccc 359 ||||||| |||||||||||||||| Sbjct: 1411 cttgccggggcacatcctcggccc 1388
>dbj|AK060990.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C11, full insert sequence Length = 1697 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cttgccgaggcacatcctcggccc 359 ||||||| |||||||||||||||| Sbjct: 1414 cttgccggggcacatcctcggccc 1391
>gb|BC044804.1| Mus musculus fatty acid desaturase domain family, member 6, mRNA (cDNA clone IMAGE:5359987), partial cds Length = 3784 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cctcccctgttcttcacctg 200 |||||||||||||||||||| Sbjct: 1341 cctcccctgttcttcacctg 1360
>dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hypothetical protein, complete and partial cds Length = 72195 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctcccctgttcttcacctg 200 |||||||||||||||||||| Sbjct: 6107 cctcccctgttcttcacctg 6088
>emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chromosome 11, complete sequence Length = 210982 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cctcccctgttcttcacctg 200 |||||||||||||||||||| Sbjct: 83988 cctcccctgttcttcacctg 83969 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,073,903 Number of Sequences: 3902068 Number of extensions: 3073903 Number of successful extensions: 58034 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57362 Number of HSP's gapped (non-prelim): 672 length of query: 408 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 386 effective length of database: 17,147,199,772 effective search space: 6618819111992 effective search space used: 6618819111992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
