ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart40a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predic... 196 4e-47
2gb|BT016492.1| Zea mays clone Contig325 mRNA sequence 196 4e-47
3dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 4e-47
4gb|AY109375.1| Zea mays CL457_2 mRNA sequence 196 4e-47
5dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
6emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA 182 7e-43
7ref|NM_190269.1| Oryza sativa (japonica cultivar-group), predic... 165 2e-37
8gb|BT016417.1| Zea mays clone Contig250 mRNA sequence 157 4e-35
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
10dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
11dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
12dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescenc... 66 1e-07
13gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence 54 4e-04
14gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, co... 54 4e-04
15gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA 50 0.006
16emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene 50 0.006
17ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMA... 48 0.025
18gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (... 48 0.025
19gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds 48 0.025
20gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (... 48 0.025
21gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At... 48 0.025
22gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At... 48 0.025
23gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, com... 48 0.025
24dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein,... 48 0.025
25gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, c... 48 0.025
26emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Co... 48 0.025
27gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative ... 48 0.025
28dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 48 0.025
29gb|AY106024.1| Zea mays PCO063168 mRNA sequence 48 0.025
30gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete s... 46 0.099
31emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chr... 44 0.39
32dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5,... 44 0.39
33ref|XM_657651.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.5
34gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence 42 1.5
35emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chr... 42 1.5
36emb|AJ005499.1|ASA005499 Avena strigosa pAs14 repetitive DNA seq... 42 1.5
37gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 ... 42 1.5
38ref|XM_638845.1| Dictyostelium discoideum hypothetical protein (... 40 6.1
39gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, comp... 40 6.1
40gb|BC049636.1| Mus musculus mitchondrial ribosomal protein S7, m... 40 6.1
41ref|NM_025305.1| Mus musculus mitchondrial ribosomal protein S7 ... 40 6.1
42ref|XM_545753.2| PREDICTED: Canis familiaris similar to Sodium/p... 40 6.1
43ref|XM_855596.1| PREDICTED: Canis familiaris similar to Sodium/p... 40 6.1
44emb|Z81045.1|CEC36F7 Caenorhabditis elegans Cosmid C36F7, comple... 40 6.1
45gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosom... 40 6.1
46gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume ... 40 6.1
47gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.1
48gb|AC130456.2| Homo sapiens chromosome 16 clone CTA-363E6, compl... 40 6.1
49emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050... 40 6.1
50gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, comp... 40 6.1
51gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, com... 40 6.1
52dbj|AK126270.1| Homo sapiens cDNA FLJ44282 fis, clone TRACH2003516 40 6.1
53dbj|AK162024.1| Mus musculus 12 days embryo female mullerian duc... 40 6.1
54dbj|AK009251.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 6.1
55dbj|AK034688.1| Mus musculus 12 days embryo embryonic body betwe... 40 6.1
56ref|NM_060132.2| Caenorhabditis elegans IRoquois subclass of hom... 40 6.1
57ref|NM_178099.2| Danio rerio ATPase, Na+/K+ transporting, alpha ... 40 6.1
58gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041... 40 6.1
59gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, ... 40 6.1
60gb|AY094620.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 9... 40 6.1
61gb|U91321.1|HUU91321 Human Chromosome 16 BAC clone CIT987SK-A-36... 40 6.1
62gb|DQ203519.1| Uncultured bacterium clone MedHO1-20-2-C3 predict... 40 6.1
63gb|AF051242.1|AF051242 Picea mariana probable 60S ribosomal prot... 40 6.1
64emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on ch... 40 6.1 
>ref|NM_190270.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 906

 Score =  196 bits (99), Expect = 4e-47
 Identities = 192/223 (86%)
 Strand = Plus / Minus

                                                                       
Query: 229 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 877 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 818

                                                                       
Query: 289 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 348
           | |||||||| ||||||||| | ||||| |||||||| |||   |||   | ||||||||
Sbjct: 817 gttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggttccttcttggttg 758

                                                                       
Query: 349 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 408
           |||| || || |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 757 atttggccatggtaggatcagcacggatggcagcatggaccttcttgtacagtgcttcca 698

                                                      
Query: 409 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
           |||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 697 tgccatcagcatcaattcccttcttgaggtactcactgaagtg 655
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>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence
          Length = 1365

 Score =  196 bits (99), Expect = 4e-47
 Identities = 162/183 (88%)
 Strand = Plus / Minus

                                                                       
Query: 272 gagactggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtctt 331
           |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||  |||
Sbjct: 902 gagactggccttcctctgctcgtatgtcagtttcttggggttgtacctcttgtgctcctt 843

                                                                       
Query: 332 tggtggttccttggttgattttgctattgtaggatcagcacgaatggcagcatgaacctt 391
           |||||| | ||||||||| ||  | |  | |||||||||||| ||||||||||| |||||
Sbjct: 842 tggtggctgcttggttgacttgaccacagaaggatcagcacggatggcagcatggacctt 783

                                                                       
Query: 392 cttgtacagtgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
           ||||||||| ||||||||| | |||||||| ||||||||||| |||||||||||||||||
Sbjct: 782 cttgtacagagcttccatgtcgtcagcctcaattcccttcttaatgtactcactgaagtg 723

              
Query: 452 aga 454
           |||
Sbjct: 722 aga 720
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>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full
           insert sequence
          Length = 1219

 Score =  196 bits (99), Expect = 4e-47
 Identities = 192/223 (86%)
 Strand = Plus / Minus

                                                                       
Query: 229 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 973 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 914

                                                                       
Query: 289 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 348
           | |||||||| ||||||||| | ||||| |||||||| |||   |||   | ||||||||
Sbjct: 913 gttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggttccttcttggttg 854

                                                                       
Query: 349 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 408
           |||| || || |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 853 atttggccatggtaggatcagcacggatggcagcatggaccttcttgtacagtgcttcca 794

                                                      
Query: 409 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
           |||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 793 tgccatcagcatcaattcccttcttgaggtactcactgaagtg 751
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>gb|AY109375.1| Zea mays CL457_2 mRNA sequence
          Length = 1397

 Score =  196 bits (99), Expect = 4e-47
 Identities = 159/179 (88%)
 Strand = Plus / Minus

                                                                       
Query: 276 ctggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggt 335
           ||||||||||||||||| || |||||||||||||| ||||||||||| |||  |||||||
Sbjct: 914 ctggccttcctctgctcatatgtcagcttcttggggttgtacctcttatgctcctttggt 855

                                                                       
Query: 336 ggttccttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttg 395
           || | ||||||||| ||  | || | |||||||||||| ||||||||||| |||||||||
Sbjct: 854 ggctgcttggttgacttgacaatggaaggatcagcacggatggcagcatggaccttcttg 795

                                                                      
Query: 396 tacagtgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtgaga 454
           ||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 794 tacagagcttccatgtcatcagcctcaattcccttcttaatgtactcactgaagtgaga 736
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>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full
           insert sequence
          Length = 1219

 Score =  188 bits (95), Expect = 1e-44
 Identities = 158/179 (88%)
 Strand = Plus / Minus

                                                                       
Query: 273 agactggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtcttt 332
           ||||||||||||||||| |||||||| ||||||||| | ||||| |||||||| |||   
Sbjct: 930 agactggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgcc 871

                                                                       
Query: 333 ggtggttccttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttc 392
           |||   | |||||||||||| || || |||||||||||||| ||||||||||| ||||||
Sbjct: 870 ggttccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttc 811

                                                                      
Query: 393 ttgtacagtgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
           |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 810 ttgtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 752
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>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA
          Length = 1114

 Score =  182 bits (92), Expect = 7e-43
 Identities = 192/224 (85%), Gaps = 1/224 (0%)
 Strand = Plus / Minus

                                                                       
Query: 229 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 887 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 828

                                                                       
Query: 289 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 348
           | |||||||| ||||||||| | ||||| |||||||| |||   |||   | ||||||||
Sbjct: 827 gttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggttccttcttggttg 768

                                                                       
Query: 349 attttgctattgtagg-atcagcacgaatggcagcatgaaccttcttgtacagtgcttcc 407
           |||| || || ||||| ||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 767 atttggccatggtagggatcagcacggatggcagcatggaccttcttgtacagtgcttcc 708

                                                       
Query: 408 atgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
           ||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 707 atgccatcagcatcaattcccttcttgaggtactcactgaagtg 664
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>ref|NM_190269.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 915

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Minus

                                                                       
Query: 229 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
           ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 886 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 827

                                                                       
Query: 289 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 348
           |||||||||||||||||||| | ||||| |||||||| ||    |||   | |||||| |
Sbjct: 826 gctcgtaggtcagcttcttgaggttgtatctcttgtgggtagccggttccttcttggtcg 767

                                                                       
Query: 349 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 408
           |||| || || |||||||| || || ||||||||||| |||||||||||||||| |||||
Sbjct: 766 atttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacagtgattcca 707

                                                      
Query: 409 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
           |||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 706 tgccatcagcgtcaattcccttcttgaggtactcactaaagtg 664
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>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence
          Length = 1212

 Score =  157 bits (79), Expect = 4e-35
 Identities = 187/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 229 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
           ||||||||||||| || ||||||||    |||||||  || | ||| |||||||||||||
Sbjct: 960 catcagcaccaccggaggagttgagttggttgagcctttcaatgaggctggccttcctct 901

                                                                       
Query: 289 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 348
           |||| || |||||||||||||| ||||||||||| |||  ||||||||| | ||||||||
Sbjct: 900 gctcatatgtcagcttcttggggttgtacctcttatgctcctttggtggctgcttggttg 841

                                                                       
Query: 349 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 408
           | ||  | || | |||||| ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 840 acttaacaatggaaggatcggcacggatggcagcatggaccttcttgtacagcgcttcta 781

                                                      
Query: 409 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
           |  |||||||||| | ||||||||| |||||| ||||||||||
Sbjct: 780 tttcatcagcctcaactcccttcttaatgtacgcactgaagtg 738
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 4e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                            
Query: 341      cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 400
                |||||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 38969192 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 38969133

                                                                   
Query: 401      tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
                |||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 38969132 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 38969082



 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                            
Query: 341      cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 400
                |||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 38963860 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 38963801

                                                                   
Query: 401      tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
                || ||||||||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 38963800 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtg 38963750



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                            
Query: 229      catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
                ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 38964058 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 38963999

                                    
Query: 289      gctcgtaggtcagcttcttg 308
                ||||||||||||||||||||
Sbjct: 38963998 gctcgtaggtcagcttcttg 38963979



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 229      catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
                ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 38969388 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 38969329

                                    
Query: 289      gctcgtaggtcagcttcttg 308
                | |||||||| |||||||||
Sbjct: 38969328 gttcgtaggttagcttcttg 38969309
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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score =  157 bits (79), Expect = 4e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                         
Query: 341   cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 400
             |||||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 42825 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 42766

                                                                
Query: 401   tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
             |||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 42765 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 42715



 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                         
Query: 341   cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 400
             |||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 37493 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 37434

                                                                
Query: 401   tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
             || ||||||||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 37433 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtg 37383



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 229   catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
             ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 37691 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 37632

                                 
Query: 289   gctcgtaggtcagcttcttg 308
             ||||||||||||||||||||
Sbjct: 37631 gctcgtaggtcagcttcttg 37612



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 229   catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
             ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 43021 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 42962

                                 
Query: 289   gctcgtaggtcagcttcttg 308
             | |||||||| |||||||||
Sbjct: 42961 gttcgtaggttagcttcttg 42942
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>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696G06
          Length = 142571

 Score =  157 bits (79), Expect = 4e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                          
Query: 341    cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 400
              |||||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 133978 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 133919

                                                                 
Query: 401    tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
              |||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 133918 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 133868



 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                          
Query: 341    cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 400
              |||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 128646 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 128587

                                                                 
Query: 401    tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 451
              || ||||||||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 128586 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtg 128536



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                          
Query: 229    catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
              ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 128844 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 128785

                                  
Query: 289    gctcgtaggtcagcttcttg 308
              ||||||||||||||||||||
Sbjct: 128784 gctcgtaggtcagcttcttg 128765



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 229    catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 288
              ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 134174 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 134115

                                  
Query: 289    gctcgtaggtcagcttcttg 308
              | |||||||| |||||||||
Sbjct: 134114 gttcgtaggttagcttcttg 134095
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>dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescence-associated
           protein, complete cds
          Length = 1100

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 369 gcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgattccc 428
           |||||||| |||||||||||||||||||| ||| | || || |||||||| || || || 
Sbjct: 805 gcacgaattgcagcatgaaccttcttgtaaagttcctcaattccatcagcttctatccct 746

                                    
Query: 429 ttcttgatgtactcactgaagtgag 453
           |||||||| || | |||||||||||
Sbjct: 745 ttcttgatatattgactgaagtgag 721
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>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence
          Length = 1274

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 369 gcacgaatggcagcatgaaccttcttgtaca 399
           ||||| |||||||||||||||||||||||||
Sbjct: 854 gcacgtatggcagcatgaaccttcttgtaca 824



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 297 gtcagcttcttgggattgtacctcttgtgcgtctt 331
           |||||||||||  ||||||||||||||||| ||||
Sbjct: 926 gtcagcttcttcagattgtacctcttgtgcttctt 892
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>gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, complete cds
          Length = 1171

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 412 catcagcctcgattcccttcttgatgtactcactgaagtgaga 454
           |||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 721 catcggcctcaatgcccttcttgatgtactcgctgaagtgaga 679
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>gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA
          Length = 1114

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 375 atggcagcatgaaccttcttgtaca 399
           |||||||||||||||||||||||||
Sbjct: 771 atggcagcatgaaccttcttgtaca 747
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>emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene
          Length = 1115

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 369 gcacgaatggcagcatgaaccttcttgta 397
           |||||||| ||||||||||||||||||||
Sbjct: 758 gcacgaattgcagcatgaaccttcttgta 730
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>ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5);
           structural constituent of ribosome AT3G25520 (ATL5)
           mRNA, complete cds
          Length = 1254

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 808 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 749

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 748 cctttcttgatgtaagcactgaagtgag 721
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>gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA,
           complete cds
          Length = 969

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659
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>gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds
          Length = 906

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659
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>gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA,
           complete cds
          Length = 1161

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 805 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 746

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 745 cctttcttgatgtaagcactgaagtgag 718
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>gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA,
           complete cds
          Length = 1151

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 803 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 744

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 743 cctttcttgatgtaagcactgaagtgag 716
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>gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA,
           complete cds
          Length = 925

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659
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>gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds
          Length = 1108

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 793 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 734

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 733 cctttcttgatgtaagcactgaagtgag 706
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>dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein, complete cds,
           clone: RAFL22-05-O03
          Length = 517

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 177 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 118

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 117 cctttcttgatgtaagcactgaagtgag 90
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>gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, complete cds
          Length = 906

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659
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>emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH10ZG11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1076

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 778 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 719

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 718 cctttcttgatgtaagcactgaagtgag 691
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>gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative (At3g25520) mRNA,
           complete cds
          Length = 1117

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 366 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 803 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 744

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           || |||||||||||  ||||||||||||
Sbjct: 743 cctttcttgatgtaagcactgaagtgag 716
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>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2
          Length = 84896

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                         
Query: 366   tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 425
             ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 56590 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 56649

                                         
Query: 426   cccttcttgatgtactcactgaagtgag 453
             || |||||||||||  ||||||||||||
Sbjct: 56650 cctttcttgatgtaagcactgaagtgag 56677
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>gb|AY106024.1| Zea mays PCO063168 mRNA sequence
          Length = 620

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 426 cccttcttgatgtactcactgaagtgag 453
           ||||||||||||||||| ||||||||||
Sbjct: 587 cccttcttgatgtactcgctgaagtgag 560
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>gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete sequence
          Length = 1248

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                       
Query: 367 cagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgattc 426
           |||||||||| || || ||||||||||||||||   | || ||||  ||||| || | ||
Sbjct: 807 cagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaactc 748

                                      
Query: 427 ccttcttgatgtactcactgaagtgag 453
           | |||||||||||  ||||||||||||
Sbjct: 747 ctttcttgatgtaagcactgaagtgag 721
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>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete
              sequence
          Length = 219800

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 49     cagaacggtactcaaaaccaagggggcagg 78
              ||||| || |||||||||||||||||||||
Sbjct: 138517 cagaatgggactcaaaaccaagggggcagg 138546
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>dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5, partial cds
          Length = 399

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 294 taggtcagcttcttgggattgtacctcttgtgcgtctt 331
           ||||||||||||||  | |||||||||||||| |||||
Sbjct: 276 taggtcagcttcttaaggttgtacctcttgtgtgtctt 239



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 375 atggcagcatgaaccttcttgtaca 399
           |||||||| ||||||||||||||||
Sbjct: 195 atggcagcgtgaaccttcttgtaca 171
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>ref|XM_657651.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5139.2), mRNA
          Length = 3624

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 202  actctcattcatcgtcgtcttcatc 226
            ||||||||||||| |||||||||||
Sbjct: 3164 actctcattcatcttcgtcttcatc 3188
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>gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 375 atggcagcatgaaccttcttgtaca 399
           ||||||||||||||||| |||||||
Sbjct: 794 atggcagcatgaacctttttgtaca 770
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>emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chromosome 4 Contains the
             5' end of the Dbccr1 gene for deleted in bladder cancer 1,
             complete sequence
          Length = 186197

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    taagataatccagaactccag 51
             |||||||||||||||||||||
Sbjct: 81236 taagataatccagaactccag 81216
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>emb|AJ005499.1|ASA005499 Avena strigosa pAs14 repetitive DNA sequence
          Length = 639

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 331 ttggtggttccttggttgattttgc 355
           ||||||||||||||| |||||||||
Sbjct: 341 ttggtggttccttgggtgattttgc 317
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>gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 haplotype) gene, 3' end
          Length = 2006

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 424 ttcccttcttgatgtactcac 444
           |||||||||||||||||||||
Sbjct: 906 ttcccttcttgatgtactcac 926
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>ref|XM_638845.1| Dictyostelium discoideum hypothetical protein (DDB0217483), partial
            mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 210  tcatcgtcgtcttcatcgacatca 233
            ||||| ||||||||||||||||||
Sbjct: 1936 tcatcatcgtcttcatcgacatca 1959
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>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   gagactggccttcctctgct 291
             ||||||||||||||||||||
Sbjct: 17640 gagactggccttcctctgct 17621
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>gb|BC049636.1| Mus musculus mitchondrial ribosomal protein S7, mRNA (cDNA clone
            MGC:58388 IMAGE:6532964), complete cds
          Length = 1355

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 100  aacttgagcaaaaatgcctctcac 123
            ||||||||||||| ||||||||||
Sbjct: 1121 aacttgagcaaaactgcctctcac 1144
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>ref|NM_025305.1| Mus musculus mitchondrial ribosomal protein S7 (Mrps7), mRNA
          Length = 1355

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 100  aacttgagcaaaaatgcctctcac 123
            ||||||||||||| ||||||||||
Sbjct: 1121 aacttgagcaaaactgcctctcac 1144
to top
>ref|XM_545753.2| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting
            ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+
            ATPase 2), transcript variant 1 (LOC488636), mRNA
          Length = 3039

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  ccttcctctgctcgtaggtc 299
            ||||||||||||||||||||
Sbjct: 2815 ccttcctctgctcgtaggtc 2796
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>ref|XM_855596.1| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting
            ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+
            ATPase 2), transcript variant 2 (LOC488636), mRNA
          Length = 2949

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  ccttcctctgctcgtaggtc 299
            ||||||||||||||||||||
Sbjct: 2833 ccttcctctgctcgtaggtc 2814
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>emb|Z81045.1|CEC36F7 Caenorhabditis elegans Cosmid C36F7, complete sequence
          Length = 39211

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 210  tcatcgtcgtcttcatcgacatca 233
            |||||||||||||||||| |||||
Sbjct: 1300 tcatcgtcgtcttcatcgtcatca 1323
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>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence
          Length = 161757

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    tggttccttggttgattttg 354
              ||||||||||||||||||||
Sbjct: 134118 tggttccttggttgattttg 134137
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>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1)
             gene, complete cds
          Length = 169976

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   gttccttggttgattttgct 356
             ||||||||||||||||||||
Sbjct: 35316 gttccttggttgattttgct 35297
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 257     attgagccgctctacgagac 276
               ||||||||||||||||||||
Sbjct: 4242294 attgagccgctctacgagac 4242313
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>gb|AC130456.2| Homo sapiens chromosome 16 clone CTA-363E6, complete sequence
          Length = 220579

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    aagcatgaagacagcactat 183
              ||||||||||||||||||||
Sbjct: 133716 aagcatgaagacagcactat 133697
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>emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050K3 on chromosome 20 Contains part
             of the EYA2 gene for eyes absent homolog 2 (Drosophila), a
             glyceraldehyde 3-phosphate dehydrogenase (GAPDH)
             pseudogene and an RPL27A (ribosomal protein L27A)
             pseudogene, complete sequence
          Length = 143981

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    tttaagataatccagaactccaga 52
             |||||||||| |||||||||||||
Sbjct: 56872 tttaagataaaccagaactccaga 56849
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>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence
          Length = 230597

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   gagactggccttcctctgct 291
             ||||||||||||||||||||
Sbjct: 56125 gagactggccttcctctgct 56144
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>gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, complete sequence
          Length = 203937

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   tggttccttggttgattttg 354
             ||||||||||||||||||||
Sbjct: 33502 tggttccttggttgattttg 33521
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>dbj|AK126270.1| Homo sapiens cDNA FLJ44282 fis, clone TRACH2003516
          Length = 2555

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  aagcatgaagacagcactat 183
            ||||||||||||||||||||
Sbjct: 1586 aagcatgaagacagcactat 1567
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>dbj|AK162024.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820413L12 product:mitchondrial ribosomal
            protein S7, full insert sequence
          Length = 1715

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 100  aacttgagcaaaaatgcctctcac 123
            ||||||||||||| ||||||||||
Sbjct: 1100 aacttgagcaaaactgcctctcac 1123
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>dbj|AK009251.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310009G03 product:mitchondrial ribosomal
            protein S7, full insert sequence
          Length = 1288

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 100  aacttgagcaaaaatgcctctcac 123
            ||||||||||||| ||||||||||
Sbjct: 1086 aacttgagcaaaactgcctctcac 1109
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>dbj|AK034688.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430024N04 product:unclassifiable, full insert
            sequence
          Length = 2042

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 335  tggttccttggttgattttg 354
            ||||||||||||||||||||
Sbjct: 1763 tggttccttggttgattttg 1744
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>ref|NM_060132.2| Caenorhabditis elegans IRoquois subclass of homeoboX family member
           (irx-1) (irx-1) mRNA, complete cds
          Length = 1150

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 210 tcatcgtcgtcttcatcgacatca 233
           |||||||||||||||||| |||||
Sbjct: 675 tcatcgtcgtcttcatcgtcatca 652
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>ref|NM_178099.2| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.5 polypeptide
            (atp1a1a.5), mRNA
          Length = 3838

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  ccttcctctgctcgtaggtc 299
            ||||||||||||||||||||
Sbjct: 2810 ccttcctctgctcgtaggtc 2791
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>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
              complete sequence
          Length = 333321

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 210    tcatcgtcgtcttcatcgacatca 233
              ||||| ||||||||||||||||||
Sbjct: 171756 tcatcatcgtcttcatcgacatca 171779
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>gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, complete sequence
          Length = 93590

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   cgtcgtcttcatcgacatca 233
             ||||||||||||||||||||
Sbjct: 76007 cgtcgtcttcatcgacatca 76026
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>gb|AY094620.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 9 (atp1a1a.5) mRNA,
            complete cds
          Length = 3838

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  ccttcctctgctcgtaggtc 299
            ||||||||||||||||||||
Sbjct: 2810 ccttcctctgctcgtaggtc 2791
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>gb|U91321.1|HUU91321 Human Chromosome 16 BAC clone CIT987SK-A-363E6, complete sequence
          Length = 220633

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    aagcatgaagacagcactat 183
              ||||||||||||||||||||
Sbjct: 133766 aagcatgaagacagcactat 133747
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>gb|DQ203519.1| Uncultured bacterium clone MedHO1-20-2-C3 predicted
          proteorhodopsin gene, partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 29 tttaagataatccagaactc 48
          ||||||||||||||||||||
Sbjct: 62 tttaagataatccagaactc 43
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>gb|AF051242.1|AF051242 Picea mariana probable 60S ribosomal protein L5 (Sb58) mRNA,
           partial cds
          Length = 556

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 372 cgaatggcagcatgaaccttcttgtaca 399
           |||||||||||||| || ||||||||||
Sbjct: 118 cgaatggcagcatgcactttcttgtaca 91
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>emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on chromosome 11, complete
             sequence
          Length = 198031

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 100   aacttgagcaaaaatgcctctcac 123
             ||||||||||||| ||||||||||
Sbjct: 17403 aacttgagcaaaactgcctctcac 17380


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,779,119
Number of Sequences: 3902068
Number of extensions: 3779119
Number of successful extensions: 70384
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70192
Number of HSP's gapped (non-prelim): 166
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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