Clone Name | rbart40a02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transpor... | 44 | 1e-04 | 2 | CHL1_ARATH (Q05085) Nitrate/chlorate transporter | 37 | 0.013 | 3 | GTR4_PIG (Q9XT10) Solute carrier family 2, facilitated glucose t... | 29 | 3.6 |
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>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)| Length = 585 Score = 43.5 bits (101), Expect = 1e-04 Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 1/40 (2%) Frame = -1 Query: 264 VGHFFSSFLISAIDGYTKKSGAS-WFSNNLNRAHLDYFYW 148 +G++ SS +++ + +T ++G W S+NLN HLDYF+W Sbjct: 519 LGNYLSSLILTLVTYFTTRNGQEGWISDNLNSGHLDYFFW 558
>CHL1_ARATH (Q05085) Nitrate/chlorate transporter| Length = 590 Score = 37.0 bits (84), Expect = 0.013 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = -1 Query: 276 SIFGVGHFFSSFLISAIDGYTKKSGASWFSNNLNRAHLDYFYW 148 S +G FFSS L++ ++ +T K+ W +++LN+ L FYW Sbjct: 505 STLALGFFFSSVLVTIVEKFTGKAHP-WIADDLNKGRLYNFYW 546
>GTR4_PIG (Q9XT10) Solute carrier family 2, facilitated glucose transporter| member 4 (Glucose transporter type 4, insulin-responsive) (Fragment) Length = 174 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -1 Query: 276 SIFGVGHFFSSFLISAIDGYTKKSGASWFSNNL 178 +IF VG FSSFL+ I + + A F+N L Sbjct: 81 AIFSVGGMFSSFLLGIISQWLGRKKAMLFNNTL 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,361,355 Number of Sequences: 219361 Number of extensions: 216982 Number of successful extensions: 473 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 471 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 473 length of database: 80,573,946 effective HSP length: 67 effective length of database: 65,876,759 effective search space used: 1581042216 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)