ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
2gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone ... 60 7e-06
3gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4... 56 1e-04
4gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7... 50 0.006
5gb|AY106967.1| Zea mays PCO088243 mRNA sequence 50 0.006
6gb|U37350.1|PPU37350 Pseudomonas putida morphinone reductase (mo... 50 0.006
7ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 48 0.025
8ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 48 0.025
9gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds 48 0.025
10emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate ... 48 0.025
11gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, com... 48 0.025
12gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28... 48 0.025
13gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete s... 48 0.025
14gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate re... 48 0.025
15emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) ... 44 0.40
16emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) ... 44 0.40
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
18gb|AC011444.5|AC011444 Homo sapiens chromosome 19 clone CTC-232P... 44 0.40
19dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
20dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
21dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 g... 44 0.40
22dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
23dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic ac... 44 0.40
24dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a prot... 44 0.40
25gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, com... 42 1.6
26ref|XM_324451.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.6
27ref|XM_951988.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.6
28emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II B... 42 1.6
29ref|NM_106319.3| Arabidopsis thaliana OPR2; 12-oxophytodienoate ... 40 6.2
30ref|NM_106320.2| Arabidopsis thaliana heat shock protein binding... 40 6.2
31gb|BT025251.1| Arabidopsis thaliana At1g76690 mRNA, complete cds 40 6.2
32emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.2
33ref|XM_661982.1| Cryptosporidium hominis TU502 homeobox-containi... 40 6.2
34emb|BX571851.16| Zebrafish DNA sequence from clone DKEYP-102B12 ... 40 6.2
35emb|AL589665.4| Human DNA sequence from clone RP11-123D12 on chr... 40 6.2
36emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 6.2
37ref|XM_628384.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 6.2
38emb|BX816218.1|CNS0ABRK Arabidopsis thaliana Full-length cDNA Co... 40 6.2
39emb|BX813593.1|CNS0ACEC Arabidopsis thaliana Full-length cDNA Co... 40 6.2
40emb|BX813470.1|CNS0ACCC Arabidopsis thaliana Full-length cDNA Co... 40 6.2
41emb|BX814348.1|CNS0ABZY Arabidopsis thaliana Full-length cDNA Co... 40 6.2
42emb|BX816752.1|CNS0ABN0 Arabidopsis thaliana Full-length cDNA Co... 40 6.2
43emb|BX816748.1|CNS0ABM5 Arabidopsis thaliana Full-length cDNA Co... 40 6.2
44emb|BX841572.1|CNS09YFC Arabidopsis thaliana Full-length cDNA Co... 40 6.2
45dbj|AK117738.1| Arabidopsis thaliana At1g76690 mRNA for putative... 40 6.2
46dbj|AK110167.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
47emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in... 40 6.2 
>dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H07, full
            insert sequence
          Length = 1360

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 169  tcgaggaaggggtagtcggtgtaaccgacgacggggtcggagatgtagaa 218
            |||||||| |||||||||||||| ||| |||||||||||| | |||||||
Sbjct: 1156 tcgaggaacgggtagtcggtgtagccggcgacggggtcggcggtgtagaa 1107
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>gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBa0043H01, from
             chromosome 4, complete sequence
          Length = 15426

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 169   tcgaggaaggggtagtcggtgtaaccgacgacggggtcggagatgtagaa 218
             |||||||| |||||||||||||| ||| |||||||||||| | |||||||
Sbjct: 12773 tcgaggaacgggtagtcggtgtagccggcgacggggtcggcggtgtagaa 12822
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>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds
          Length = 1833

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 170  cgaggaaggggtagtcggtgtaaccgacgacggggtcggagatgtagaaggt 221
            |||| ||||||||||| ||||| || | ||||||||||||| ||||||||||
Sbjct: 1750 cgagaaaggggtagtctgtgtatccaatgacggggtcggaggtgtagaaggt 1699
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>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds
          Length = 1594

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 170  cgaggaaggggtagtcggtgtaaccgacgacggggtc 206
            ||||||| | |||||| ||||||||||||||||||||
Sbjct: 1410 cgaggaatgtgtagtccgtgtaaccgacgacggggtc 1374
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>gb|AY106967.1| Zea mays PCO088243 mRNA sequence
          Length = 765

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 170 cgaggaaggggtagtcggtgtaaccgacgacggggtc 206
           ||||||| | |||||| ||||||||||||||||||||
Sbjct: 581 cgaggaatgtgtagtccgtgtaaccgacgacggggtc 545
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>gb|U37350.1|PPU37350 Pseudomonas putida morphinone reductase (morB) gene, complete cds
          Length = 1567

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 169  tcgaggaaggggtagtcggtgtaaccgac 197
            ||||||||||||||||||||||| |||||
Sbjct: 1393 tcgaggaaggggtagtcggtgtagccgac 1365
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>ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.2 mRNA, complete cds
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 169  tcgaggaaggggtagtcggtgtaaccgacgac 200
            |||||||| ||||| |||||||||||||||||
Sbjct: 1251 tcgaggaaagggtaatcggtgtaaccgacgac 1220



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 1162 gaacctctttggcaggtccgggtt 1139
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>ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.1 mRNA, complete cds
          Length = 1451

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 169  tcgaggaaggggtagtcggtgtaaccgacgac 200
            |||||||| ||||| |||||||||||||||||
Sbjct: 1242 tcgaggaaagggtaatcggtgtaaccgacgac 1211



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 1153 gaacctctttggcaggtccgggtt 1130
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>gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds
          Length = 1119

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 169  tcgaggaaggggtagtcggtgtaaccgacgac 200
            |||||||| ||||| |||||||||||||||||
Sbjct: 1106 tcgaggaaagggtaatcggtgtaaccgacgac 1075



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 1017 gaacctctttggcaggtccgggtt 994
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>emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate reductase
          Length = 1311

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 169  tcgaggaaggggtagtcggtgtaaccgacgac 200
            |||||||| ||||| |||||||||||||||||
Sbjct: 1171 tcgaggaaagggtaatcggtgtaaccgacgac 1140



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 1082 gaacctctttggcaggtccgggtt 1059
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>gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, complete cds
          Length = 1252

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 169  tcgaggaaggggtagtcggtgtaaccgacgac 200
            |||||||| ||||| |||||||||||||||||
Sbjct: 1176 tcgaggaaagggtaatcggtgtaaccgacgac 1145



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 1087 gaacctctttggcaggtccgggtt 1064
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>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete
             sequence
          Length = 87684

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 169   tcgaggaaggggtagtcggtgtaaccgacgac 200
             |||||||| ||||| |||||||||||||||||
Sbjct: 15030 tcgaggaaagggtaatcggtgtaaccgacgac 14999



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 258   gaacctctttggcaggtctgggtt 281
             ||||| ||||||||||||||||||
Sbjct: 17025 gaaccgctttggcaggtctgggtt 17002



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 258   gaacctctttggcaggtctgggtt 281
             |||||||||||||||||| |||||
Sbjct: 14941 gaacctctttggcaggtccgggtt 14918
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>gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete sequence
          Length = 1280

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 169  tcgaggaaggggtagtcggtgtaaccgacgac 200
            |||||||| ||||| |||||||||||||||||
Sbjct: 1176 tcgaggaaagggtaatcggtgtaaccgacgac 1145



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 1087 gaacctctttggcaggtccgggtt 1064
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>gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate reductase OPR1 and
            12-oxophytodienoate reductase OPR2 genes, complete cds
          Length = 7079

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 169  tcgaggaaggggtagtcggtgtaaccgacgac 200
            |||||||| ||||| |||||||||||||||||
Sbjct: 4624 tcgaggaaagggtaatcggtgtaaccgacgac 4593



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            ||||| ||||||||||||||||||
Sbjct: 6619 gaaccgctttggcaggtctgggtt 6596



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 4535 gaacctctttggcaggtccgggtt 4512
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>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for
           oxo-phytodienoic acid reductase (opda2 gene)
          Length = 1248

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 333 caccttgcccccttcctcgcggtcatacccgcca 366
           |||||||  ||||||||| |||||||||||||||
Sbjct: 825 caccttgttcccttcctcccggtcatacccgcca 792
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>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic
           acid reductase (opda gene)
          Length = 1343

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 333 caccttgcccccttcctcgcggtcatacccgcca 366
           |||||||  ||||||||| |||||||||||||||
Sbjct: 981 caccttgttcccttcctcccggtcatacccgcca 948
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 333     caccttgcccccttcctcgcggtcatacccgcca 366
               |||||||  ||||||||| |||||||||||||||
Sbjct: 5929338 caccttgttcccttcctcccggtcatacccgcca 5929371



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 333     caccttgcccccttcctcgcggtcatacccgcca 366
               |||||||  ||||||||| |||||||||||||||
Sbjct: 5924075 caccttgttcccttcctcccggtcatacccgcca 5924108



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 430     cgtccatcgacgatggccatcctcggctc 458
               ||||| |||||| ||||||||||||||||
Sbjct: 5910678 cgtccttcgacggtggccatcctcggctc 5910706
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>gb|AC011444.5|AC011444 Homo sapiens chromosome 19 clone CTC-232P5, complete sequence
          Length = 133925

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 319   tatccctctgcaatcaccttgc 340
             ||||||||||||||||||||||
Sbjct: 37403 tatccctctgcaatcaccttgc 37424
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>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0024N18
          Length = 128739

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 333   caccttgcccccttcctcgcggtcatacccgcca 366
             |||||||  ||||||||| |||||||||||||||
Sbjct: 50990 caccttgttcccttcctcccggtcatacccgcca 51023



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 333   caccttgcccccttcctcgcggtcatacccgcca 366
             |||||||  ||||||||| |||||||||||||||
Sbjct: 45727 caccttgttcccttcctcccggtcatacccgcca 45760



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 430   cgtccatcgacgatggccatcctcggctc 458
             ||||| |||||| ||||||||||||||||
Sbjct: 32330 cgtccttcgacggtggccatcctcggctc 32358
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0537F07
          Length = 147724

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 333    caccttgcccccttcctcgcggtcatacccgcca 366
              |||||||  ||||||||| |||||||||||||||
Sbjct: 130113 caccttgttcccttcctcccggtcatacccgcca 130146



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 333    caccttgcccccttcctcgcggtcatacccgcca 366
              |||||||  ||||||||| |||||||||||||||
Sbjct: 124850 caccttgttcccttcctcccggtcatacccgcca 124883



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 430    cgtccatcgacgatggccatcctcggctc 458
              ||||| |||||| ||||||||||||||||
Sbjct: 111453 cgtccttcgacggtggccatcctcggctc 111481
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>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1  gene for
            12-oxo-phytodienoic acid reductase, complete cds
          Length = 2492

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 333  caccttgcccccttcctcgcggtcatacccgcca 366
            |||||||  ||||||||| |||||||||||||||
Sbjct: 2114 caccttgttcccttcctcccggtcatacccgcca 2081
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>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full
            insert sequence
          Length = 1520

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 333  caccttgcccccttcctcgcggtcatacccgcca 366
            |||||||  ||||||||| |||||||||||||||
Sbjct: 1166 caccttgttcccttcctcccggtcatacccgcca 1133
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>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase,
            complete cds
          Length = 1384

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 333  caccttgcccccttcctcgcggtcatacccgcca 366
            |||||||  ||||||||| |||||||||||||||
Sbjct: 1019 caccttgttcccttcctcccggtcatacccgcca 986
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>dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a protein, complete cds
          Length = 1454

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 178  gggtagtcggtgtaaccgacgacggggtcg 207
            |||||||||||||| ||||| |||||||||
Sbjct: 1132 gggtagtcggtgtagccgacaacggggtcg 1103
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>gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, complete sequence
          Length = 188044

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 140    ctgaacaaaaaacctccatca 160
              |||||||||||||||||||||
Sbjct: 113882 ctgaacaaaaaacctccatca 113902
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>ref|XM_324451.1| Neurospora crassa OR74A hypothetical protein (NCU05095.1) partial
           mRNA
          Length = 1554

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 201 ggggtcggagatgtagaaggt 221
           |||||||||||||||||||||
Sbjct: 861 ggggtcggagatgtagaaggt 841
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>ref|XM_951988.1| Neurospora crassa OR74A hypothetical protein (NCU05095.1) partial
           mRNA
          Length = 1554

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 201 ggggtcggagatgtagaaggt 221
           |||||||||||||||||||||
Sbjct: 861 ggggtcggagatgtagaaggt 841
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>emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II BAC contig B23B10
          Length = 99967

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   ggggtcggagatgtagaaggt 221
             |||||||||||||||||||||
Sbjct: 30489 ggggtcggagatgtagaaggt 30469
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>ref|NM_106319.3| Arabidopsis thaliana OPR2; 12-oxophytodienoate reductase AT1G76690
            (OPR2) mRNA, complete cds
          Length = 1573

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            ||||| ||||||||||||||||||
Sbjct: 1109 gaaccgctttggcaggtctgggtt 1086
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>ref|NM_106320.2| Arabidopsis thaliana heat shock protein binding / unfolded protein
            binding AT1G76700 mRNA, complete cds
          Length = 2266

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            ||||| ||||||||||||||||||
Sbjct: 1789 gaaccgctttggcaggtctgggtt 1812
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>gb|BT025251.1| Arabidopsis thaliana At1g76690 mRNA, complete cds
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            ||||| ||||||||||||||||||
Sbjct: 1023 gaaccgctttggcaggtctgggtt 1000
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 189     gtaaccgacgacggggtcgg 208
               ||||||||||||||||||||
Sbjct: 1058145 gtaaccgacgacggggtcgg 1058164
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>ref|XM_661982.1| Cryptosporidium hominis TU502 homeobox-containing protein
            (Chro.70242) partial mRNA
          Length = 3051

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  ttgcatcactgaacaaaaaa 151
            ||||||||||||||||||||
Sbjct: 2553 ttgcatcactgaacaaaaaa 2572
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>emb|BX571851.16| Zebrafish DNA sequence from clone DKEYP-102B12 in linkage group 9,
             complete sequence
          Length = 63718

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    aattgcactatttatttgaa 42
             ||||||||||||||||||||
Sbjct: 31122 aattgcactatttatttgaa 31103
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>emb|AL589665.4| Human DNA sequence from clone RP11-123D12 on chromosome 1 Contains a
             neural precursor cell expressed developmentally
             down-regulated 5 (NEDD5) pseudogene, complete sequence
          Length = 132623

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aattaattgcatcactgaacaaaa 149
             ||||||||||||| ||||||||||
Sbjct: 67340 aattaattgcatccctgaacaaaa 67317
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    cctgtatggcagcaagcgct 415
              ||||||||||||||||||||
Sbjct: 689840 cctgtatggcagcaagcgct 689859
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>ref|XM_628384.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd7_2100),
            partial mRNA
          Length = 6801

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  ttgcatcactgaacaaaaaa 151
            ||||||||||||||||||||
Sbjct: 2553 ttgcatcactgaacaaaaaa 2572
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>emb|BX816218.1|CNS0ABRK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH34ZH11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1237

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 1072 gaacctctttggcaggtccgggtt 1049
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>emb|BX813593.1|CNS0ACEC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB26ZH11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1264

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            ||||| ||||||||||||||||||
Sbjct: 1077 gaaccgctttggcaggtctgggtt 1054
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>emb|BX813470.1|CNS0ACCC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB19ZE03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1253

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 1157 gaacctctttggcaggtccgggtt 1134
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>emb|BX814348.1|CNS0ABZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB69ZE10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1221

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 169  tcgaggaaggggtagtcggtgtaaccgacgac 200
            |||||||| ||||| ||||||||||| |||||
Sbjct: 1165 tcgaggaaagggtaatcggtgtaaccaacgac 1134



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            |||||||||||||||||| |||||
Sbjct: 1076 gaacctctttggcaggtccgggtt 1053
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>emb|BX816752.1|CNS0ABN0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH66ZH10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1296

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            ||||| ||||||||||||||||||
Sbjct: 1109 gaaccgctttggcaggtctgggtt 1086
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>emb|BX816748.1|CNS0ABM5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH66ZG08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1226

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            ||||| ||||||||||||||||||
Sbjct: 1062 gaaccgctttggcaggtctgggtt 1039
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>emb|BX841572.1|CNS09YFC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH92ZF02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1165

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 258 gaacctctttggcaggtctgggtt 281
           |||||||||||||||||| |||||
Sbjct: 150 gaacctctttggcaggtccgggtt 173
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>dbj|AK117738.1| Arabidopsis thaliana At1g76690 mRNA for putative 12-oxophytodienoate
            reductase (OPR2), complete cds, clone: RAFL17-42-I17
          Length = 1313

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 258  gaacctctttggcaggtctgggtt 281
            ||||| ||||||||||||||||||
Sbjct: 1083 gaaccgctttggcaggtctgggtt 1060
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>dbj|AK110167.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-F12, full
            insert sequence
          Length = 2770

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 189  gtaaccgacgacggggtcggagat 212
            |||||||||||||||||| |||||
Sbjct: 1755 gtaaccgacgacggggtccgagat 1732
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>emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in linkage group 19,
              complete sequence
          Length = 205973

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    tcgtccatcgacgatggcca 448
              ||||||||||||||||||||
Sbjct: 195251 tcgtccatcgacgatggcca 195232


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,490,146
Number of Sequences: 3902068
Number of extensions: 3490146
Number of successful extensions: 59695
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59565
Number of HSP's gapped (non-prelim): 130
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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