>gb|AC158807.11| Mus musculus 10 BAC RP24-64G24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 228073

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 52     aaaaacaataaaaatctgctgattt 76
              ||||| |||||||||||||||||||
Sbjct: 195673 aaaaataataaaaatctgctgattt 195697

>emb|CR388140.8| Zebrafish DNA sequence from clone CH211-190G11, complete sequence
          Length = 160541

 Score = 42.1 bits (21), Expect = 0.34
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     aataaaaatctgctgattttg 78
              |||||||||||||||||||||
Sbjct: 121885 aataaaaatctgctgattttg 121905

>gb|AE013106.1| Thermoanaerobacter tengcongensis MB4, section 133 of 244 of the
            complete genome
          Length = 9910

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   taaatttttcaacagcgtat 35
            ||||||||||||||||||||
Sbjct: 9514 taaatttttcaacagcgtat 9533

>emb|BX548015.15| Zebrafish DNA sequence from clone DKEY-18J14 in linkage group 1, complete
              sequence
          Length = 238174

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     acaataaaaatctgctgatt 75
              ||||||||||||||||||||
Sbjct: 190450 acaataaaaatctgctgatt 190469

>gb|AC116620.6| Homo sapiens BAC clone RP11-261I22 from 2, complete sequence
          Length = 62301

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    taaaaacaataaaaatctgc 70
             ||||||||||||||||||||
Sbjct: 31272 taaaaacaataaaaatctgc 31253

>emb|BX511178.6| Zebrafish DNA sequence from clone DKEY-221H15 in linkage group 20,
             complete sequence
          Length = 187362

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    ctaaaaacaataaaaatctg 69
             ||||||||||||||||||||
Sbjct: 24594 ctaaaaacaataaaaatctg 24613

>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 51     taaaaacaataaaaatctgctgatttt 77
              |||||||||| ||| ||||||||||||
Sbjct: 878058 taaaaacaatcaaactctgctgatttt 878032

>gb|AC148460.2| Xenopus tropicalis clone CH216-3L17, complete sequence
          Length = 194144

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 50     ctaaaaacaataaaaatct 68
              |||||||||||||||||||
Sbjct: 192325 ctaaaaacaataaaaatct 192343

>gb|AC116516.7| Mus musculus chromosome 1, clone RP24-336H7, complete sequence
          Length = 134253

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 8     aacaggaataaatttttcaacag 30
             ||||||||||||||||| |||||
Sbjct: 52469 aacaggaataaattttttaacag 52447

>gb|AC115000.7| Mus musculus chromosome 1, clone RP24-103F2, complete sequence
          Length = 191603

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 57     caataaaaatctgctgattttgg 79
              |||||||||||||| ||||||||
Sbjct: 110633 caataaaaatctgcagattttgg 110655

>gb|AC129324.4| Mus musculus BAC clone RP23-253G24 from chromosome 18, complete
             sequence
          Length = 166990

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 52    aaaaacaataaaaatctgc 70
             |||||||||||||||||||
Sbjct: 66071 aaaaacaataaaaatctgc 66053

>emb|BX936425.7| Zebrafish DNA sequence from clone CH211-39L24 in linkage group 17,
             complete sequence
          Length = 173763

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 52    aaaaacaataaaaatctgc 70
             |||||||||||||||||||
Sbjct: 62533 aaaaacaataaaaatctgc 62551

>gb|AC144706.2| Danio rerio clone CH211-164M18, complete sequence
          Length = 149960

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    taaaaacaataaaaatctg 69
             |||||||||||||||||||
Sbjct: 97741 taaaaacaataaaaatctg 97759

>gb|AC127235.3| Mus musculus BAC clone RP24-570A23 from chromosome 10, complete sequence
          Length = 189180

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 11     aggaataaatttttcaaca 29
              |||||||||||||||||||
Sbjct: 144632 aggaataaatttttcaaca 144614

>ref|XM_725351.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00243)
           partial mRNA
          Length = 3012

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 50  ctaaaaacaataaaaatct 68
           |||||||||||||||||||
Sbjct: 530 ctaaaaacaataaaaatct 548

>ref|XM_674830.1| Plasmodium berghei strain ANKA hypothetical protein (PB000991.01.0)
           partial mRNA
          Length = 2784

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 50  ctaaaaacaataaaaatct 68
           |||||||||||||||||||
Sbjct: 281 ctaaaaacaataaaaatct 299

>emb|AL138921.14| Human DNA sequence from clone RP11-316M21 on chromosome 10 Contains the
             3' end of gene FLJ30135, the CHUK gene for conserved
             helix-loop ubiquitous kinase, a novel gene (FLJ32012), a
             novel gene containing FLJ10998, FLJ40576, FLJ3922,
             FLJ30751, a prohibitin (PHB) pseudogene, a tropomyosin
             (TPM4) pseudogene and three CpG islands, complete sequence
          Length = 194916

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 52    aaaaacaataaaaatctgc 70
             |||||||||||||||||||
Sbjct: 80617 aaaaacaataaaaatctgc 80635

>emb|AL139092.12| Human DNA sequence from clone RP11-420G6 on chromosome 6 Contains the
             gene for werners helicase interacting protein (WHIP)
             (RUVBL), the SERPINB1 gene for serine (or cysteine)
             proteinase inhibitor clade B (ovalbumin) member 1, a
             putative novel gene and the 3' end of a putative novel
             gene, complete sequence
          Length = 168147

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     aacaggaataaatttttca 26
             |||||||||||||||||||
Sbjct: 55454 aacaggaataaatttttca 55472

>gb|AC107993.9| Homo sapiens chromosome 17, clone RP11-194N12, complete sequence
          Length = 173608

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     ggcctaaaaacaataaaaa 65
              |||||||||||||||||||
Sbjct: 144848 ggcctaaaaacaataaaaa 144830

>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              3/6
          Length = 317511

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 51     taaaaacaataaaaatctgctgatttt 77
              |||||||||| ||| ||||||||||||
Sbjct: 177598 taaaaacaatcaaactctgctgatttt 177572

>emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 in linkage group 15,
             complete sequence
          Length = 191457

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    aataaaaatctgctgattt 76
             |||||||||||||||||||
Sbjct: 60961 aataaaaatctgctgattt 60943

>gb|AC105185.5| Homo sapiens chromosome 8, clone RP11-1113C11, complete sequence
          Length = 152141

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    ggcctaaaaacaataaaaa 65
             |||||||||||||||||||
Sbjct: 22503 ggcctaaaaacaataaaaa 22485

>gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, complete sequence
          Length = 177308

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     ggcctaaaaacaataaaaa 65
              |||||||||||||||||||
Sbjct: 133052 ggcctaaaaacaataaaaa 133070

>gb|AC106011.3| Homo sapiens chromosome 8, clone RP11-466A10, complete sequence
          Length = 162791

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    ggcctaaaaacaataaaaa 65
             |||||||||||||||||||
Sbjct: 32800 ggcctaaaaacaataaaaa 32818

>gb|AC018767.3|AC018767 Homo sapiens chromosome 16 clone RP11-279O17, complete sequence
          Length = 159857

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 59     ataaaaatctgctgatttt 77
              |||||||||||||||||||
Sbjct: 125316 ataaaaatctgctgatttt 125334

>emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13, complete sequence
          Length = 142564

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 58     aataaaaatctgctgattt 76
              |||||||||||||||||||
Sbjct: 128613 aataaaaatctgctgattt 128631

>emb|BX005271.9| Zebrafish DNA sequence from clone CH211-145F15 in linkage group 5,
              complete sequence
          Length = 162019

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 52     aaaaacaataaaaatctgctgat 74
              ||||||||||||||| |||||||
Sbjct: 114478 aaaaacaataaaaatgtgctgat 114456

>emb|BX248086.8| Zebrafish DNA sequence from clone CH211-277E21 in linkage group 12,
           complete sequence
          Length = 173672

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  taaaaacaataaaaatctg 69
           |||||||||||||||||||
Sbjct: 604 taaaaacaataaaaatctg 622

>emb|BX927276.23| Zebrafish DNA sequence from clone CH211-124A3 in linkage group 22,
             complete sequence
          Length = 166844

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 55    aacaataaaaatctgctgatttt 77
             ||||||||||||||||| |||||
Sbjct: 29196 aacaataaaaatctgcttatttt 29218

>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence
          Length = 239740

 Score = 38.2 bits (19), Expect = 5.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     gcctaaaaacaataaaaat 66
              |||||||||||||||||||
Sbjct: 181475 gcctaaaaacaataaaaat 181493


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,470,443
Number of Sequences: 3902068
Number of extensions: 1470443
Number of successful extensions: 132989
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132872
Number of HSP's gapped (non-prelim): 117
length of query: 116
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 95
effective length of database: 17,151,101,840
effective search space: 1629354674800
effective search space used: 1629354674800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)