ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen... 56 6e-08
2EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) ... 55 7e-08
3MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1 49 5e-06
4EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4... 47 2e-05
5EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2... 47 2e-05
6EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5... 40 0.003
7EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXP... 38 0.012
8MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I) 36 0.046
9EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXP... 36 0.046
10MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Ho... 33 0.39
11E78C_DROME (P45447) Ecdysone-induced protein 78C (DR-78) 32 0.66
12NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor) 32 0.87
13MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I)... 32 0.87
14SUR2_CAEEL (Q10669) Protein sur-2 31 1.9
15MPAL2_LOLPR (P14947) Pollen allergen Lol p 2-A (Lol p II-A) 30 3.3
16EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-... 30 4.3
17EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EX... 30 4.3
18MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Ph... 30 4.3
19NPY5R_HUMAN (Q15761) Neuropeptide Y receptor type 5 (NPY5-R) (NP... 28 9.6
20HAT1_ASPFU (Q4X0W8) Histone acetyltransferase type B catalytic s... 28 9.6
21EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXP... 28 9.6
22FADL_SHIFL (P59741) Long-chain fatty acid transport protein prec... 28 9.6
23FADL_ECOLI (P10384) Long-chain fatty acid transport protein prec... 28 9.6
24FADL_ECO57 (Q8XCN6) Long-chain fatty acid transport protein prec... 28 9.6

>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea|
           m I)
          Length = 269

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 24/36 (66%), Positives = 31/36 (86%)
 Frame = -2

Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 372
           PFS+R+TS+SGKK++A +VIPANWRP+  Y S VQF
Sbjct: 233 PFSIRLTSESGKKVIAKDVIPANWRPDAVYTSNVQF 268



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>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)|
           (Fragment)
          Length = 191

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = -2

Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 372
           PFS+R+TS+SGKK++A ++IPANWRP+  Y S VQF
Sbjct: 155 PFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 190



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>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1|
          Length = 246

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 21/36 (58%), Positives = 29/36 (80%)
 Frame = -2

Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 372
           PFS+R+TS+ G  LV ++VIPANW+P+T Y S +QF
Sbjct: 209 PFSIRLTSEGGAHLVQDDVIPANWKPDTVYTSKLQF 244



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>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)|
           (Ath-ExpBeta-1.1)
          Length = 259

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
 Frame = -2

Query: 479 PFSMRITS-DSGKKLVANNVIPANWRPNTDYRSFVQF 372
           PF++R+TS +S K +VA NVIPANW+P+  YRS V F
Sbjct: 223 PFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259



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>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)|
           (Ath-ExpBeta-1.4)
          Length = 273

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
 Frame = -2

Query: 479 PFSMRITS-DSGKKLVANNVIPANWRPNTDYRSFVQF 372
           P S+R+TS +SGK +VA+NVIPANW+P   Y+S V F
Sbjct: 237 PLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273



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>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)|
           (Ath-ExpBeta-1.3)
          Length = 264

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 479 PFSMRITSD-SGKKLVANNVIPANWRPNTDYRSFVQF 372
           PF++R+TS  SGKK++A  VIP  W P   Y S V F
Sbjct: 221 PFNIRLTSAVSGKKIIAKGVIPEKWSPGAIYHSKVNF 257



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>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)|
           (Ath-ExpBeta-1.6)
          Length = 264

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 479 PFSMRITS-DSGKKLVANNVIPANWRPNTDYRSFVQFS 369
           PFS+++T+  +GK L A +V+P NW P   Y S + FS
Sbjct: 224 PFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLNFS 261



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>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)|
          Length = 263

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -2

Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRS 384
           PF++R T++ G K  A +VIP  W+ +T Y S
Sbjct: 231 PFTVRYTTEGGTKTEAEDVIPEGWKADTSYES 262



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>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)|
           (Ath-ExpBeta-1.5)
          Length = 271

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -2

Query: 479 PFSMRITSDSGKK-LVANNVIPANWRPNTDYRSFVQFS 369
           PFS+++T+ S  K L A +VIP+NW P   Y S + FS
Sbjct: 231 PFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNFS 268



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>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l|
           1.0101 and 1.0102)
          Length = 265

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYRS 384
           PF++R T++ G K  A +VIP  W+ +T Y +
Sbjct: 233 PFTVRYTTEGGTKGEAEDVIPEGWKADTAYEA 264



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>E78C_DROME (P45447) Ecdysone-induced protein 78C (DR-78)|
          Length = 866

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = -1

Query: 471 HAHHQRLRQEAGGQQCHPGQLEAQHRLPL------LRPVQLIGPDRPMSGHVRLHHARMH 310
           H H Q+ +Q+   QQ HPGQ + Q    L      L  +  +    P S H     +   
Sbjct: 189 HTHQQQQQQQQ--QQQHPGQQQHQLNCTLSNGGGALYTISSVHQFGPASNHNTSSSSPSS 246

Query: 309 ACMRSDPSAGCSSS 268
           +   S P +GCSS+
Sbjct: 247 SAAHSSPDSGCSSA 260



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>NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor)|
          Length = 464

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
 Frame = -3

Query: 127 WF---ACALP-PTDSVYGVPCITWH-----YLCVTKIPNQSYKLYYTYSLF 2
           WF   A ALP P  S   +P   WH     Y+C    P+++ + YYT SLF
Sbjct: 229 WFIALATALPIPIVSGLDIPMSPWHTKCEKYICREMWPSRTQEYYYTLSLF 279



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>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)|
          Length = 263

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDY 390
           PF++R T++ G K    +VIP  W+ +T Y
Sbjct: 231 PFTVRYTTEGGTKSEFEDVIPEGWKADTSY 260



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>SUR2_CAEEL (Q10669) Protein sur-2|
          Length = 1587

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 14/67 (20%)
 Frame = -1

Query: 468  AHHQRLRQEAGGQQCHPGQLEAQHRLPLLRPVQLIGPDRPMS---------GHVRL---- 328
            + HQ ++Q++     HP Q + QH++P +   Q +GP  P +         GHV +    
Sbjct: 1465 SQHQTIQQQSN----HPTQQQLQHQIPNMSMHQQMGPQYPGAVFHHPSGPVGHVPMQYGM 1520

Query: 327  -HHARMH 310
             HH + H
Sbjct: 1521 GHHMQQH 1527



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>MPAL2_LOLPR (P14947) Pollen allergen Lol p 2-A (Lol p II-A)|
          Length = 97

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNTDYR 387
           PF+ R  S+ G + V ++V+PA+++  T Y+
Sbjct: 65  PFNFRFVSEKGMRNVFDDVVPADFKVGTTYK 95



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>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)|
           (Ath-ExpAlpha-1.3)
          Length = 248

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -2

Query: 473 SMRITSDSGKKLVANNVIPANW 408
           S ++T+  G+ +V+NN+ PA+W
Sbjct: 215 SFKVTASDGRTVVSNNIAPASW 236



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>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)|
           (Ath-ExpAlpha-1.26)
          Length = 262

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 473 SMRITS-DSGKKLVANNVIPANWRPNTDYRSFVQF 372
           S R+TS  +G+ + A NV PANW     Y+S   F
Sbjct: 227 SFRVTSYTTGETIYAWNVAPANWSGGKTYKSTANF 261



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>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)|
          Length = 269

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 479 PFSMRITSDSGKKLVANNVIPANWRPNT 396
           PF++R T++ G K    +VIP  W+ +T
Sbjct: 237 PFTVRYTTEGGTKAEFEDVIPEGWKADT 264



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>NPY5R_HUMAN (Q15761) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)|
           (Y5 receptor) (NPYY5)
          Length = 455

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 115 ALPPTDSVYGVPCITWHYLCVTKIPNQSYKLYYTYSL 5
           +L      +G   ++  YLCV   P+ SY++ +T SL
Sbjct: 189 SLVELQETFGSALLSSRYLCVESWPSDSYRIAFTISL 225



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>HAT1_ASPFU (Q4X0W8) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48)
          Length = 570

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 435 GQQCHPGQLEAQHRLPLLRPVQLIGPDRPMSGHVRLHHARMHACMRSDPS 286
           G + HP QL ++ R+       LI P    SGH R  +  +H+    DPS
Sbjct: 295 GPEIHPSQLPSRLRIAQF----LILPPHQNSGHGRHLYTAIHSACVQDPS 340



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>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)|
           (AtEx17) (Ath-ExpAlpha-1.13)
          Length = 255

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 473 SMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 372
           S ++    G    A NV+P+NWR    ++S V F
Sbjct: 222 SFKVQLSDGSIKAALNVVPSNWRFGQSFKSNVNF 255



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>FADL_SHIFL (P59741) Long-chain fatty acid transport protein precursor (Outer|
           membrane fadL protein) (Outer membrane flp protein)
          Length = 448

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 461 TSDSGKKLVANNVIPANWRPNTDY 390
           TS SG+ L A+N+ P  W PN  +
Sbjct: 88  TSPSGRSLKADNIAPTAWVPNMHF 111



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>FADL_ECOLI (P10384) Long-chain fatty acid transport protein precursor (Outer|
           membrane fadL protein) (Outer membrane flp protein)
          Length = 448

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 461 TSDSGKKLVANNVIPANWRPNTDY 390
           TS SG+ L A+N+ P  W PN  +
Sbjct: 88  TSPSGRSLKADNIAPTAWVPNMHF 111



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>FADL_ECO57 (Q8XCN6) Long-chain fatty acid transport protein precursor (Outer|
           membrane fadL protein) (Outer membrane flp protein)
          Length = 448

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 461 TSDSGKKLVANNVIPANWRPNTDY 390
           TS SG+ L A+N+ P  W PN  +
Sbjct: 88  TSPSGRSLKADNIAPTAWVPNMHF 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,064,604
Number of Sequences: 219361
Number of extensions: 1343090
Number of successful extensions: 3837
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3837
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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